RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 IFIT5Q13325 482 aaKnown RBP15.92■□□□□ 0.14
SNORD55-201ENST00000581525 WASHC4Q2M389 1173 aa15.92■□□□□ 0.14
SNORD55-201ENST00000581525 GPC2Q8N158 579 aa15.92■□□□□ 0.14
SNORD55-201ENST00000581525 ANKRD44Q8N8A2 993 aa15.92■□□□□ 0.14
SNORD55-201ENST00000581525 ZNRF3Q9ULT6 936 aa15.92■□□□□ 0.14
SNORD55-201ENST00000581525 TOMM70O94826 608 aa15.91■□□□□ 0.14
SNORD55-201ENST00000581525 C1QTNF8P60827 252 aa15.91■□□□□ 0.14
SNORD55-201ENST00000581525 EYA3Q99504 573 aa15.91■□□□□ 0.14
SNORD55-201ENST00000581525 BICC1Q9H694 974 aaKnown RBP15.91■□□□□ 0.14
SNORD55-201ENST00000581525 GGA1Q9UJY5 639 aa15.91■□□□□ 0.14
SNORD55-201ENST00000581525 LEMD3Q9Y2U8 911 aa15.91■□□□□ 0.14
SNORD55-201ENST00000581525 ZNF541Q9H0D2 1346 aa15.91■□□□□ 0.14
SNORD55-201ENST00000581525 EIF6P56537 245 aaKnown RBP15.9■□□□□ 0.14
SNORD55-201ENST00000581525 CCDC57Q2TAC2 916 aa15.9■□□□□ 0.14
SNORD55-201ENST00000581525 NIM1KQ8IY84 436 aa15.9■□□□□ 0.14
SNORD55-201ENST00000581525 ANKRD2Q9GZV1 360 aa15.9■□□□□ 0.14
SNORD55-201ENST00000581525 YDJCA8MPS7 323 aa15.89■□□□□ 0.13
SNORD55-201ENST00000581525 C6orf229H3BNL8 230 aa15.89■□□□□ 0.13
SNORD55-201ENST00000581525 CXCL9Q07325 125 aa15.89■□□□□ 0.13
SNORD55-201ENST00000581525 ZKSCAN2Q63HK3 967 aa15.89■□□□□ 0.13
SNORD55-201ENST00000581525 C15orf52Q6ZUT6 534 aaKnown RBP15.89■□□□□ 0.13
SNORD55-201ENST00000581525 RBM46Q8TBY0 533 aaKnown RBP15.89■□□□□ 0.13
SNORD55-201ENST00000581525 MPHOSPH8Q99549 860 aa15.89■□□□□ 0.13
SNORD55-201ENST00000581525 ANKIB1Q9P2G1 1089 aa15.89■□□□□ 0.13
SNORD55-201ENST00000581525 HDAC5Q9UQL6 1122 aa15.89■□□□□ 0.13
SNORD55-201ENST00000581525 CHRNDQ07001 517 aa15.88■□□□□ 0.13
SNORD55-201ENST00000581525 ZC3H12CQ9C0D7 883 aaKnown RBP15.88■□□□□ 0.13
SNORD55-201ENST00000581525 TNNQ9UQP3 1299 aa15.88■□□□□ 0.13
SNORD55-201ENST00000581525 RIPOR2Q9Y4F9 1068 aa15.88■□□□□ 0.13
SNORD55-201ENST00000581525 IRS2Q9Y4H2 1338 aa15.88■□□□□ 0.13
SNORD55-201ENST00000581525 IQCA1LA6NCM1 817 aa15.87■□□□□ 0.13
SNORD55-201ENST00000581525 WTIPA6NIX2 430 aaPredicted RBP15.87■□□□□ 0.13
SNORD55-201ENST00000581525 UFL1O94874 794 aa15.87■□□□□ 0.13
SNORD55-201ENST00000581525 RFX5P48382 616 aaPredicted RBP15.87■□□□□ 0.13
SNORD55-201ENST00000581525 LDHAL6AQ6ZMR3 332 aa15.87■□□□□ 0.13
SNORD55-201ENST00000581525 MED23Q9ULK4 1368 aa15.87■□□□□ 0.13
SNORD55-201ENST00000581525 GNAI3P08754 354 aa15.86■□□□□ 0.13
SNORD55-201ENST00000581525 UBTFL1P0CB47 393 aaPredicted RBP15.86■□□□□ 0.13
SNORD55-201ENST00000581525 FSTL1Q12841 308 aa15.86■□□□□ 0.13
SNORD55-201ENST00000581525 MTX1Q13505 466 aa15.86■□□□□ 0.13
SNORD55-201ENST00000581525 TNIP1Q15025 636 aa15.86■□□□□ 0.13
SNORD55-201ENST00000581525 CIAPIN1Q6FI81 312 aa15.86■□□□□ 0.13
SNORD55-201ENST00000581525 PODNQ7Z5L7 613 aa15.86■□□□□ 0.13
SNORD55-201ENST00000581525 FRAT1Q92837 279 aaPredicted RBP15.86■□□□□ 0.13
SNORD55-201ENST00000581525 ZNF594Q96JF6 807 aaPredicted RBP15.86■□□□□ 0.13
SNORD55-201ENST00000581525 MEIS3Q99687 375 aa15.86■□□□□ 0.13
SNORD55-201ENST00000581525 TAF1DQ9H5J8 278 aaPredicted RBP15.86■□□□□ 0.13
SNORD55-201ENST00000581525 VIL1P09327 827 aaKnown RBP15.85■□□□□ 0.13
SNORD55-201ENST00000581525 SCNN1DP51172 638 aa15.85■□□□□ 0.13
SNORD55-201ENST00000581525 DPF2Q92785 391 aa15.85■□□□□ 0.13
SNORD55-201ENST00000581525 FBXO3Q9UK99 471 aa15.85■□□□□ 0.13
SNORD55-201ENST00000581525 ZNF804BA4D1E1 1349 aa15.85■□□□□ 0.13
SNORD55-201ENST00000581525 ZNF609O15014 1411 aa15.85■□□□□ 0.13
SNORD55-201ENST00000581525 SCN4AP35499 1836 aa15.84■□□□□ 0.13
SNORD55-201ENST00000581525 RIMBP2O15034 1052 aa15.84■□□□□ 0.13
SNORD55-201ENST00000581525 ECE2O60344 883 aa15.84■□□□□ 0.13
SNORD55-201ENST00000581525 PTPN12Q05209 780 aaKnown RBP15.84■□□□□ 0.13
SNORD55-201ENST00000581525 DZIP1LQ8IYY4 767 aaKnown RBP15.84■□□□□ 0.13
SNORD55-201ENST00000581525 TMEM57Q8N5G2 664 aa15.84■□□□□ 0.13
SNORD55-201ENST00000581525 GPR101Q96P66 508 aaPredicted RBP15.84■□□□□ 0.13
SNORD55-201ENST00000581525 PUS3Q9BZE2 481 aaKnown RBP15.84■□□□□ 0.13
SNORD55-201ENST00000581525 HACL1Q9UJ83 578 aa15.84■□□□□ 0.13
SNORD55-201ENST00000581525 CHMP3Q9Y3E7 222 aa15.84■□□□□ 0.13
SNORD55-201ENST00000581525 ZBTB7BO15156 539 aaPredicted RBP15.83■□□□□ 0.12
SNORD55-201ENST00000581525 UBE4AQ14139 1066 aa15.83■□□□□ 0.12
SNORD55-201ENST00000581525 TXNRD3Q86VQ6 643 aa15.83■□□□□ 0.12
SNORD55-201ENST00000581525 COA1Q9GZY4 146 aa15.83■□□□□ 0.12
SNORD55-201ENST00000581525 DBNDD1Q9H9R9 158 aa15.83■□□□□ 0.12
SNORD55-201ENST00000581525 KCNQ5Q9NR82 932 aa15.83■□□□□ 0.12
SNORD55-201ENST00000581525 PSMD14O00487 310 aa15.82■□□□□ 0.12
SNORD55-201ENST00000581525 RAD17O75943 681 aa15.82■□□□□ 0.12
SNORD55-201ENST00000581525 RLBP1P12271 317 aa15.82■□□□□ 0.12
SNORD55-201ENST00000581525 RPS12P25398 132 aaKnown RBP15.82■□□□□ 0.12
SNORD55-201ENST00000581525 DOK7Q18PE1 504 aa15.82■□□□□ 0.12
SNORD55-201ENST00000581525 PNMA8AQ86V59 439 aaPredicted RBP15.82■□□□□ 0.12
SNORD55-201ENST00000581525 C16orf71Q8IYS4 520 aaPredicted RBP15.82■□□□□ 0.12
SNORD55-201ENST00000581525 VGLL2Q8N8G2 317 aa15.82■□□□□ 0.12
SNORD55-201ENST00000581525 CLUAP1Q96AJ1 413 aa15.82■□□□□ 0.12
SNORD55-201ENST00000581525 GPRC5DQ9NZD1 345 aa15.82■□□□□ 0.12
SNORD55-201ENST00000581525 RCAN3Q9UKA8 241 aa15.82■□□□□ 0.12
SNORD55-201ENST00000581525 LRRFIP2Q9Y608 721 aaKnown RBP15.82■□□□□ 0.12
SNORD55-201ENST00000581525 GJA3Q9Y6H8 435 aa15.82■□□□□ 0.12
SNORD55-201ENST00000581525 MROH5Q6ZUA9 1318 aa15.82■□□□□ 0.12
SNORD55-201ENST00000581525 TAF5LO75529 589 aa15.81■□□□□ 0.12
SNORD55-201ENST00000581525 MS4A1P11836 297 aa15.81■□□□□ 0.12
SNORD55-201ENST00000581525 EPHX2P34913 555 aa15.81■□□□□ 0.12
SNORD55-201ENST00000581525 EPS15P42566 896 aa15.81■□□□□ 0.12
SNORD55-201ENST00000581525 LRRC24Q50LG9 513 aa15.81■□□□□ 0.12
SNORD55-201ENST00000581525 TAF7LQ5H9L4 462 aa15.81■□□□□ 0.12
SNORD55-201ENST00000581525 SMC1BQ8NDV3 1235 aa15.81■□□□□ 0.12
SNORD55-201ENST00000581525 GMLQ99445 158 aa15.81■□□□□ 0.12
SNORD55-201ENST00000581525 COPRSQ9NQ92 184 aa15.81■□□□□ 0.12
SNORD55-201ENST00000581525 CNNM1Q9NRU3 951 aa15.81■□□□□ 0.12
SNORD55-201ENST00000581525 PGAP2Q9UHJ9 254 aa15.81■□□□□ 0.12
SNORD55-201ENST00000581525 SNAP23O00161 211 aa15.8■□□□□ 0.12
SNORD55-201ENST00000581525 EYA2O00167 538 aa15.8■□□□□ 0.12
SNORD55-201ENST00000581525 CIAO1O76071 339 aa15.8■□□□□ 0.12
SNORD55-201ENST00000581525 GNAI2P04899 355 aa15.8■□□□□ 0.12
SNORD55-201ENST00000581525 GMPSP49915 693 aaPredicted RBP15.8■□□□□ 0.12
SNORD55-201ENST00000581525 USP50Q70EL3 339 aaPredicted RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms