RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 CALM2P0DP24 149 aa12.23□□□□□ -0.45
SEC22B-201ENST00000578049 CALM3P0DP25 149 aa12.23□□□□□ -0.45
SEC22B-201ENST00000578049 MYL5Q02045 173 aa12.23□□□□□ -0.45
SEC22B-201ENST00000578049 FAM160A1Q05DH4 1040 aa12.23□□□□□ -0.45
SEC22B-201ENST00000578049 RRAGBQ5VZM2 374 aa12.23□□□□□ -0.45
SEC22B-201ENST00000578049 DZIP1Q86YF9 867 aaKnown RBP12.23□□□□□ -0.45
SEC22B-201ENST00000578049 ZNF830Q96NB3 372 aaPredicted RBP12.23□□□□□ -0.45
SEC22B-201ENST00000578049 SLC26A6Q9BXS9 759 aa12.23□□□□□ -0.45
SEC22B-201ENST00000578049 TRIM75PA6NK02 468 aa12.23□□□□□ -0.45
SEC22B-201ENST00000578049 CALML3P27482 149 aa12.23□□□□□ -0.45
SEC22B-201ENST00000578049 WTAPQ15007 396 aa12.23□□□□□ -0.45
SEC22B-201ENST00000578049 TTC31Q49AM3 519 aaPredicted RBP12.23□□□□□ -0.45
SEC22B-201ENST00000578049 SPTY2D1Q68D10 685 aaPredicted RBP12.23□□□□□ -0.45
SEC22B-201ENST00000578049 ERMNQ8TAM6 284 aa12.23□□□□□ -0.45
SEC22B-201ENST00000578049 UGGT2Q9NYU1 1516 aa12.23□□□□□ -0.45
SEC22B-201ENST00000578049 CCDC121Q6ZUS5 278 aa12.23□□□□□ -0.45
SEC22B-201ENST00000578049 OTUD6BQ8N6M0 293 aa12.23□□□□□ -0.45
SEC22B-201ENST00000578049 ESR2Q92731 530 aa12.23□□□□□ -0.45
SEC22B-201ENST00000578049 NESP48681 1621 aa12.22□□□□□ -0.45
SEC22B-201ENST00000578049 TMOD3Q9NYL9 352 aa12.22□□□□□ -0.45
SEC22B-201ENST00000578049 PTGS1P23219 599 aa12.22□□□□□ -0.45
SEC22B-201ENST00000578049 CCDC96Q2M329 555 aa12.22□□□□□ -0.45
SEC22B-201ENST00000578049 CCDC129Q6ZRS4 1044 aa12.22□□□□□ -0.45
SEC22B-201ENST00000578049 FBF1Q8TES7 1133 aa12.22□□□□□ -0.45
SEC22B-201ENST00000578049 CEP85Q6P2H3 762 aa12.22□□□□□ -0.45
SEC22B-201ENST00000578049 LLPHQ9BRT6 129 aaKnown RBP12.22□□□□□ -0.45
SEC22B-201ENST00000578049 ZSWIM4Q9H7M6 989 aa12.22□□□□□ -0.45
SEC22B-201ENST00000578049 B4GALNT4Q76KP1 1039 aa12.22□□□□□ -0.45
SEC22B-201ENST00000578049 NECAB1Q8N987 351 aa12.22□□□□□ -0.45
SEC22B-201ENST00000578049 LINS1Q8NG48 757 aa12.22□□□□□ -0.45
SEC22B-201ENST00000578049 BABAM1Q9NWV8 329 aa12.22□□□□□ -0.45
SEC22B-201ENST00000578049 PHF8Q9UPP1 1060 aa12.22□□□□□ -0.45
SEC22B-201ENST00000578049 CDC5LQ99459 802 aaKnown RBP12.22□□□□□ -0.45
SEC22B-201ENST00000578049 SNRPA1P09661 255 aaKnown RBP12.21□□□□□ -0.45
SEC22B-201ENST00000578049 CROCCP2Q86T23 111 aa12.21□□□□□ -0.45
SEC22B-201ENST00000578049 ATRIPQ8WXE1 791 aa12.21□□□□□ -0.45
SEC22B-201ENST00000578049 VAMP4O75379 141 aa12.21□□□□□ -0.45
SEC22B-201ENST00000578049 CHMLP26374 656 aa12.21□□□□□ -0.45
SEC22B-201ENST00000578049 AK2P54819 239 aa12.21□□□□□ -0.45
SEC22B-201ENST00000578049 IFNL2Q8IZJ0 200 aa12.21□□□□□ -0.45
SEC22B-201ENST00000578049 CCDC42Q96M95 316 aa12.21□□□□□ -0.45
SEC22B-201ENST00000578049 FERMT1Q9BQL6 677 aa12.21□□□□□ -0.45
SEC22B-201ENST00000578049 BAG3O95817 575 aa12.21□□□□□ -0.45
SEC22B-201ENST00000578049 DHX32Q7L7V1 743 aaKnown RBP12.21□□□□□ -0.45
SEC22B-201ENST00000578049 KAT14Q9H8E8 782 aa12.21□□□□□ -0.45
SEC22B-201ENST00000578049 TCOF1Q13428 1488 aaKnown RBP12.21□□□□□ -0.45
SEC22B-201ENST00000578049 BIVM-ERCC5R4GMW8 1640 aa12.21□□□□□ -0.45
SEC22B-201ENST00000578049 RTN1Q16799 776 aa12.21□□□□□ -0.46
SEC22B-201ENST00000578049 KSR2Q6VAB6 950 aa12.21□□□□□ -0.46
SEC22B-201ENST00000578049 LDHAL6AQ6ZMR3 332 aa12.21□□□□□ -0.46
SEC22B-201ENST00000578049 IPO4Q8TEX9 1081 aaKnown RBP12.21□□□□□ -0.46
SEC22B-201ENST00000578049 TSGA10Q9BZW7 698 aa12.21□□□□□ -0.46
SEC22B-201ENST00000578049 NEBLO76041 1014 aa12.21□□□□□ -0.46
SEC22B-201ENST00000578049 ACTN2P35609 894 aa12.21□□□□□ -0.46
SEC22B-201ENST00000578049 FAM76AQ8TAV0 307 aa12.21□□□□□ -0.46
SEC22B-201ENST00000578049 GPATCH8Q9UKJ3 1502 aaKnown RBP12.21□□□□□ -0.46
SEC22B-201ENST00000578049 A0A1B0GUL7 405 aa12.21□□□□□ -0.46
SEC22B-201ENST00000578049 TNNC1P63316 161 aa12.21□□□□□ -0.46
SEC22B-201ENST00000578049 MSL1Q68DK7 614 aa12.21□□□□□ -0.46
SEC22B-201ENST00000578049 ZSCAN29Q8IWY8 852 aaPredicted RBP12.21□□□□□ -0.46
SEC22B-201ENST00000578049 TBC1D5Q92609 795 aa12.21□□□□□ -0.46
SEC22B-201ENST00000578049 TTF2Q9UNY4 1162 aaKnown RBP12.21□□□□□ -0.46
SEC22B-201ENST00000578049 WAPLQ7Z5K2 1190 aa12.2□□□□□ -0.46
SEC22B-201ENST00000578049 TICAM2Q86XR7 235 aa12.2□□□□□ -0.46
SEC22B-201ENST00000578049 GPATCH11Q8N954 259 aa12.2□□□□□ -0.46
SEC22B-201ENST00000578049 TRMT112Q9UI30 125 aaKnown RBP12.2□□□□□ -0.46
SEC22B-201ENST00000578049 GNAT2P19087 354 aa12.2□□□□□ -0.46
SEC22B-201ENST00000578049 CTNNA2P26232 953 aa12.2□□□□□ -0.46
SEC22B-201ENST00000578049 LMOD1P29536 600 aaPredicted RBP12.2□□□□□ -0.46
SEC22B-201ENST00000578049 STAT6P42226 847 aa12.2□□□□□ -0.46
SEC22B-201ENST00000578049 TCERG1LQ5VWI1 586 aa12.2□□□□□ -0.46
SEC22B-201ENST00000578049 POTEDQ86YR6 584 aa12.2□□□□□ -0.46
SEC22B-201ENST00000578049 ELP1O95163 1332 aa12.2□□□□□ -0.46
SEC22B-201ENST00000578049 GRM8O00222 908 aa12.2□□□□□ -0.46
SEC22B-201ENST00000578049 RUFY3Q7L099 469 aa12.2□□□□□ -0.46
SEC22B-201ENST00000578049 ATP2A1O14983 1001 aa12.2□□□□□ -0.46
SEC22B-201ENST00000578049 Q6ZUG5 572 aa12.2□□□□□ -0.46
SEC22B-201ENST00000578049 UBE3BQ7Z3V4 1068 aa12.2□□□□□ -0.46
SEC22B-201ENST00000578049 CTNNBL1Q8WYA6 563 aaPredicted RBP12.2□□□□□ -0.46
SEC22B-201ENST00000578049 UBA5Q9GZZ9 404 aa12.2□□□□□ -0.46
SEC22B-201ENST00000578049 IKBKGQ9Y6K9 419 aa12.2□□□□□ -0.46
SEC22B-201ENST00000578049 PLB1Q6P1J6 1458 aa12.2□□□□□ -0.46
SEC22B-201ENST00000578049 LAMC3Q9Y6N6 1575 aa12.2□□□□□ -0.46
SEC22B-201ENST00000578049 KIF4AO95239 1232 aa12.2□□□□□ -0.46
SEC22B-201ENST00000578049 LIG1P18858 919 aa12.2□□□□□ -0.46
SEC22B-201ENST00000578049 ANKRD13DQ6ZTN6 518 aa12.2□□□□□ -0.46
SEC22B-201ENST00000578049 FBXO3Q9UK99 471 aa12.2□□□□□ -0.46
SEC22B-201ENST00000578049 LUC7L2Q9Y383 392 aaKnown RBP12.2□□□□□ -0.46
SEC22B-201ENST00000578049 RTL9Q8NET4 1388 aa12.19□□□□□ -0.46
SEC22B-201ENST00000578049 SREK1Q8WXA9 508 aaKnown RBP12.19□□□□□ -0.46
SEC22B-201ENST00000578049 TESK2Q96S53 571 aa12.19□□□□□ -0.46
SEC22B-201ENST00000578049 GRIN2AQ12879 1464 aa12.19□□□□□ -0.46
SEC22B-201ENST00000578049 CCDC82Q8N4S0 544 aa12.19□□□□□ -0.46
SEC22B-201ENST00000578049 DUOX2Q9NRD8 1548 aa12.19□□□□□ -0.46
SEC22B-201ENST00000578049 ZNF500O60304 480 aaPredicted RBP12.19□□□□□ -0.46
SEC22B-201ENST00000578049 IDI1Q13907 227 aa12.19□□□□□ -0.46
SEC22B-201ENST00000578049 KIF24Q5T7B8 1368 aa12.19□□□□□ -0.46
SEC22B-201ENST00000578049 TBCAO75347 108 aaKnown RBP12.19□□□□□ -0.46
SEC22B-201ENST00000578049 PRPF4BQ13523 1007 aaKnown RBP12.19□□□□□ -0.46
SEC22B-201ENST00000578049 MEX3CQ5U5Q3 659 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms