RNA–Protein interactions for RNA: ENST00000576957.1

ATP2A3-215, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 2

Gene ATP2A3, Length 1,159 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-215ENST00000576957 GPSM2P81274 684 aa17.03■□□□□ 0.32
ATP2A3-215ENST00000576957 MICALL2Q8IY33 904 aa17.03■□□□□ 0.32
ATP2A3-215ENST00000576957 PHAXQ9H814 394 aaKnown RBP17.03■□□□□ 0.32
ATP2A3-215ENST00000576957 DBNDD1Q9H9R9 158 aa17.03■□□□□ 0.32
ATP2A3-215ENST00000576957 MRS2Q9HD23 443 aa17.03■□□□□ 0.32
ATP2A3-215ENST00000576957 PODXL2Q9NZ53 605 aa17.03■□□□□ 0.32
ATP2A3-215ENST00000576957 RBM19Q9Y4C8 960 aaKnown RBP17.03■□□□□ 0.32
ATP2A3-215ENST00000576957 RIMBP2O15034 1052 aa17.02■□□□□ 0.32
ATP2A3-215ENST00000576957 TBC1D16Q8TBP0 767 aa17.02■□□□□ 0.32
ATP2A3-215ENST00000576957 ZBTB12Q9Y330 459 aaPredicted RBP17.02■□□□□ 0.32
ATP2A3-215ENST00000576957 ELL2O00472 640 aaPredicted RBP17.01■□□□□ 0.31
ATP2A3-215ENST00000576957 ECE2O60344 883 aa17.01■□□□□ 0.31
ATP2A3-215ENST00000576957 DDX58O95786 925 aaKnown RBP17.01■□□□□ 0.31
ATP2A3-215ENST00000576957 PCCAP05165 728 aaPredicted RBP17.01■□□□□ 0.31
ATP2A3-215ENST00000576957 GRM1Q13255 1194 aa17.01■□□□□ 0.31
ATP2A3-215ENST00000576957 CCDC152Q4G0S7 254 aa17.01■□□□□ 0.31
ATP2A3-215ENST00000576957 CCDC30Q5VVM6 783 aa17.01■□□□□ 0.31
ATP2A3-215ENST00000576957 MYD88Q99836 296 aa17.01■□□□□ 0.31
ATP2A3-215ENST00000576957 ZC3H12CQ9C0D7 883 aaKnown RBP17.01■□□□□ 0.31
ATP2A3-215ENST00000576957 SHTN1A0MZ66 631 aa17■□□□□ 0.31
ATP2A3-215ENST00000576957 CA12O43570 354 aa17■□□□□ 0.31
ATP2A3-215ENST00000576957 PDE8AO60658 829 aa17■□□□□ 0.31
ATP2A3-215ENST00000576957 CWC25Q9NXE8 425 aaPredicted RBP17■□□□□ 0.31
ATP2A3-215ENST00000576957 FANCIQ9NVI1 1328 aa16.99■□□□□ 0.31
ATP2A3-215ENST00000576957 AOC2O75106 756 aa16.99■□□□□ 0.31
ATP2A3-215ENST00000576957 DOK7Q18PE1 504 aa16.99■□□□□ 0.31
ATP2A3-215ENST00000576957 SAMD7Q7Z3H4 446 aa16.99■□□□□ 0.31
ATP2A3-215ENST00000576957 C8orf58Q8NAV2 365 aa16.99■□□□□ 0.31
ATP2A3-215ENST00000576957 METTL22Q9BUU2 404 aaPredicted RBP16.99■□□□□ 0.31
ATP2A3-215ENST00000576957 ZNF408Q9H9D4 720 aa16.99■□□□□ 0.31
ATP2A3-215ENST00000576957 SEC31BQ9NQW1 1179 aa16.99■□□□□ 0.31
ATP2A3-215ENST00000576957 COL4A1P02462 1669 aa16.99■□□□□ 0.31
ATP2A3-215ENST00000576957 VIL1P09327 827 aaKnown RBP16.98■□□□□ 0.31
ATP2A3-215ENST00000576957 BRPF1P55201 1214 aaPredicted RBP16.98■□□□□ 0.31
ATP2A3-215ENST00000576957 USP48Q86UV5 1035 aa16.98■□□□□ 0.31
ATP2A3-215ENST00000576957 ANKIB1Q9P2G1 1089 aa16.98■□□□□ 0.31
ATP2A3-215ENST00000576957 GGA1Q9UJY5 639 aa16.98■□□□□ 0.31
ATP2A3-215ENST00000576957 RTL9Q8NET4 1388 aa16.98■□□□□ 0.31
ATP2A3-215ENST00000576957 G3V3G9 751 aa16.97■□□□□ 0.31
ATP2A3-215ENST00000576957 UFL1O94874 794 aa16.97■□□□□ 0.31
ATP2A3-215ENST00000576957 TBC1D10BQ4KMP7 808 aaPredicted RBP16.97■□□□□ 0.31
ATP2A3-215ENST00000576957 DCAF8Q5TAQ9 597 aa16.97■□□□□ 0.31
ATP2A3-215ENST00000576957 DCPSQ96C86 337 aaKnown RBP16.97■□□□□ 0.31
ATP2A3-215ENST00000576957 KCNQ5Q9NR82 932 aa16.97■□□□□ 0.31
ATP2A3-215ENST00000576957 NOGQ13253 232 aa16.96■□□□□ 0.31
ATP2A3-215ENST00000576957 KRT26Q7Z3Y9 468 aa16.96■□□□□ 0.31
ATP2A3-215ENST00000576957 ANKRD18AQ8IVF6 992 aa16.96■□□□□ 0.31
ATP2A3-215ENST00000576957 ABHD8Q96I13 439 aa16.96■□□□□ 0.31
ATP2A3-215ENST00000576957 ZNF609O15014 1411 aa16.96■□□□□ 0.3
ATP2A3-215ENST00000576957 EGFRP00533 1210 aa16.95■□□□□ 0.3
ATP2A3-215ENST00000576957 HUNKP57058 714 aa16.95■□□□□ 0.3
ATP2A3-215ENST00000576957 CCDC27Q2M243 656 aa16.95■□□□□ 0.3
ATP2A3-215ENST00000576957 KSR2Q6VAB6 950 aa16.95■□□□□ 0.3
ATP2A3-215ENST00000576957 AGBL3Q8NEM8 1001 aa16.95■□□□□ 0.3
ATP2A3-215ENST00000576957 MAP3K2Q9Y2U5 619 aa16.95■□□□□ 0.3
ATP2A3-215ENST00000576957 XDHP47989 1333 aa16.95■□□□□ 0.3
ATP2A3-215ENST00000576957 ATP2B4P23634 1241 aa16.94■□□□□ 0.3
ATP2A3-215ENST00000576957 KIF4BQ2VIQ3 1234 aa16.94■□□□□ 0.3
ATP2A3-215ENST00000576957 RBM26Q5T8P6 1007 aaKnown RBP16.94■□□□□ 0.3
ATP2A3-215ENST00000576957 TSPYL6Q8N831 410 aa16.94■□□□□ 0.3
ATP2A3-215ENST00000576957 C2orf69Q8N8R5 385 aa16.94■□□□□ 0.3
ATP2A3-215ENST00000576957 CDC5LQ99459 802 aaKnown RBP16.94■□□□□ 0.3
ATP2A3-215ENST00000576957 GBA2Q9HCG7 927 aaPredicted RBP16.94■□□□□ 0.3
ATP2A3-215ENST00000576957 SCN9AQ15858 1988 aa16.93■□□□□ 0.3
ATP2A3-215ENST00000576957 PI4KAP2A4QPH2 592 aa16.93■□□□□ 0.3
ATP2A3-215ENST00000576957 CTSWP56202 376 aa16.93■□□□□ 0.3
ATP2A3-215ENST00000576957 NEXNQ0ZGT2 675 aa16.93■□□□□ 0.3
ATP2A3-215ENST00000576957 RSBN1LQ6PCB5 846 aaPredicted RBP16.93■□□□□ 0.3
ATP2A3-215ENST00000576957 PODNQ7Z5L7 613 aa16.93■□□□□ 0.3
ATP2A3-215ENST00000576957 PI4KAP1Q8N8J0 262 aa16.93■□□□□ 0.3
ATP2A3-215ENST00000576957 STK31Q9BXU1 1019 aa16.93■□□□□ 0.3
ATP2A3-215ENST00000576957 POLR2AP24928 1970 aaKnown RBP16.93■□□□□ 0.3
ATP2A3-215ENST00000576957 IGKV5-2P06315 115 aa16.92■□□□□ 0.3
ATP2A3-215ENST00000576957 ZNF280AP59817 542 aaPredicted RBP16.92■□□□□ 0.3
ATP2A3-215ENST00000576957 NCBP3Q53F19 620 aaKnown RBP16.92■□□□□ 0.3
ATP2A3-215ENST00000576957 RGMBQ6NW40 437 aa16.92■□□□□ 0.3
ATP2A3-215ENST00000576957 SULF1Q8IWU6 871 aa16.92■□□□□ 0.3
ATP2A3-215ENST00000576957 JARID2Q92833 1246 aaPredicted RBP16.92■□□□□ 0.3
ATP2A3-215ENST00000576957 CCDC102AQ96A19 550 aa16.92■□□□□ 0.3
ATP2A3-215ENST00000576957 CCDC85AQ96PX6 553 aaPredicted RBP16.92■□□□□ 0.3
ATP2A3-215ENST00000576957 ADM5C9JUS6 153 aa16.91■□□□□ 0.3
ATP2A3-215ENST00000576957 DLK2Q6UY11 383 aa16.91■□□□□ 0.3
ATP2A3-215ENST00000576957 FAM9BQ8IZU0 186 aa16.91■□□□□ 0.3
ATP2A3-215ENST00000576957 TTLL11Q8NHH1 800 aa16.91■□□□□ 0.3
ATP2A3-215ENST00000576957 BSDC1Q9NW68 430 aaPredicted RBP16.91■□□□□ 0.3
ATP2A3-215ENST00000576957 GGA3Q9NZ52 723 aa16.91■□□□□ 0.3
ATP2A3-215ENST00000576957 TSKSQ9UJT2 592 aa16.91■□□□□ 0.3
ATP2A3-215ENST00000576957 PSME4Q14997 1843 aa16.91■□□□□ 0.3
ATP2A3-215ENST00000576957 FAM155AB1AL88 458 aaPredicted RBP16.9■□□□□ 0.3
ATP2A3-215ENST00000576957 WWC1Q8IX03 1113 aa16.9■□□□□ 0.3
ATP2A3-215ENST00000576957 TSR2Q969E8 191 aaKnown RBP16.9■□□□□ 0.3
ATP2A3-215ENST00000576957 GMLQ99445 158 aa16.9■□□□□ 0.3
ATP2A3-215ENST00000576957 IL16Q14005 1332 aa16.9■□□□□ 0.3
ATP2A3-215ENST00000576957 USP17L3A6NCW0 530 aa16.89■□□□□ 0.29
ATP2A3-215ENST00000576957 USP17L4A6NCW7 530 aa16.89■□□□□ 0.29
ATP2A3-215ENST00000576957 NEURL1BA8MQ27 555 aa16.89■□□□□ 0.29
ATP2A3-215ENST00000576957 USP17L8P0C7I0 530 aa16.89■□□□□ 0.29
ATP2A3-215ENST00000576957 TWISTNBQ3B726 338 aaPredicted RBP16.89■□□□□ 0.29
ATP2A3-215ENST00000576957 USP17L1Q7RTZ2 530 aa16.89■□□□□ 0.29
ATP2A3-215ENST00000576957 MINPP1Q9UNW1 487 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms