RNA–Protein interactions for RNA: ENST00000575882.5

TOM1L1-221, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TOM1L1, Length 2,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-221ENST00000575882 PIP4K2AP48426 406 aaPredicted RBP20.29■□□□□ 0.84
TOM1L1-221ENST00000575882 DDX46Q7L014 1031 aaKnown RBP20.29■□□□□ 0.84
TOM1L1-221ENST00000575882 HAUS7Q99871 368 aa20.29■□□□□ 0.84
TOM1L1-221ENST00000575882 KDM6AO15550 1401 aaPredicted RBP20.29■□□□□ 0.84
TOM1L1-221ENST00000575882 CEBPZQ03701 1054 aaKnown RBP20.28■□□□□ 0.84
TOM1L1-221ENST00000575882 PPP4R3BQ5MIZ7 849 aa20.28■□□□□ 0.84
TOM1L1-221ENST00000575882 ZNF496Q96IT1 587 aaPredicted RBP20.28■□□□□ 0.84
TOM1L1-221ENST00000575882 PRDM10Q9NQV6 1147 aa20.28■□□□□ 0.84
TOM1L1-221ENST00000575882 CLIP2Q9UDT6 1046 aa20.28■□□□□ 0.84
TOM1L1-221ENST00000575882 ERBB3P21860 1342 aa20.28■□□□□ 0.84
TOM1L1-221ENST00000575882 STOX1Q6ZVD7 989 aa20.27■□□□□ 0.84
TOM1L1-221ENST00000575882 SMARCC2Q8TAQ2 1214 aa20.27■□□□□ 0.84
TOM1L1-221ENST00000575882 RAPGEF4Q8WZA2 1011 aa20.27■□□□□ 0.84
TOM1L1-221ENST00000575882 FOSBP53539 338 aa20.27■□□□□ 0.84
TOM1L1-221ENST00000575882 RABL6Q3YEC7 729 aaPredicted RBP20.27■□□□□ 0.84
TOM1L1-221ENST00000575882 C16orf45Q96MC5 204 aaPredicted RBP20.27■□□□□ 0.84
TOM1L1-221ENST00000575882 PRDM4Q9UKN5 801 aa20.27■□□□□ 0.84
TOM1L1-221ENST00000575882 CTIFO43310 598 aaKnown RBP20.26■□□□□ 0.83
TOM1L1-221ENST00000575882 CAVIN2O95810 425 aa20.26■□□□□ 0.83
TOM1L1-221ENST00000575882 LRP10Q7Z4F1 713 aa20.26■□□□□ 0.83
TOM1L1-221ENST00000575882 PDCL2Q8N4E4 241 aa20.26■□□□□ 0.83
TOM1L1-221ENST00000575882 USP16Q9Y5T5 823 aa20.26■□□□□ 0.83
TOM1L1-221ENST00000575882 PFKFB2O60825 505 aa20.26■□□□□ 0.83
TOM1L1-221ENST00000575882 LLPHQ9BRT6 129 aaKnown RBP20.26■□□□□ 0.83
TOM1L1-221ENST00000575882 CCDC9Q9Y3X0 531 aaKnown RBP20.26■□□□□ 0.83
TOM1L1-221ENST00000575882 ADD1P35611 737 aaKnown RBP20.25■□□□□ 0.83
TOM1L1-221ENST00000575882 NSUN7Q8NE18 718 aaKnown RBP20.25■□□□□ 0.83
TOM1L1-221ENST00000575882 ANKRD7Q92527 254 aa20.25■□□□□ 0.83
TOM1L1-221ENST00000575882 ATP5J2-PTCD1G3V325 749 aa20.25■□□□□ 0.83
TOM1L1-221ENST00000575882 PTCD1O75127 700 aaKnown RBP20.25■□□□□ 0.83
TOM1L1-221ENST00000575882 PHKG2P15735 406 aa20.25■□□□□ 0.83
TOM1L1-221ENST00000575882 KBTBD3Q8NAB2 608 aa20.25■□□□□ 0.83
TOM1L1-221ENST00000575882 FTOQ9C0B1 505 aaKnown RBP eCLIP20.25■□□□□ 0.83
TOM1L1-221ENST00000575882 A0A087WZG4 1122 aa20.24■□□□□ 0.83
TOM1L1-221ENST00000575882 CCDC144BQ3MJ40 725 aa20.24■□□□□ 0.83
TOM1L1-221ENST00000575882 NAA16Q6N069 864 aaPredicted RBP20.24■□□□□ 0.83
TOM1L1-221ENST00000575882 DHX32Q7L7V1 743 aaKnown RBP20.24■□□□□ 0.83
TOM1L1-221ENST00000575882 CCAR1Q8IX12 1150 aaKnown RBP20.24■□□□□ 0.83
TOM1L1-221ENST00000575882 CCDC144CPQ8IYA2 1237 aa20.24■□□□□ 0.83
TOM1L1-221ENST00000575882 CACTINQ8WUQ7 758 aaKnown RBP20.24■□□□□ 0.83
TOM1L1-221ENST00000575882 SH3TC1Q8TE82 1336 aa20.24■□□□□ 0.83
TOM1L1-221ENST00000575882 GOLGA6L19H0YKK7 550 aa20.24■□□□□ 0.83
TOM1L1-221ENST00000575882 HMGB1P09429 215 aaKnown RBP20.24■□□□□ 0.83
TOM1L1-221ENST00000575882 SNRPA1P09661 255 aaKnown RBP20.24■□□□□ 0.83
TOM1L1-221ENST00000575882 ZC3H6P61129 1189 aaKnown RBP20.24■□□□□ 0.83
TOM1L1-221ENST00000575882 CBX1P83916 185 aa20.24■□□□□ 0.83
TOM1L1-221ENST00000575882 IQCB1Q15051 598 aa20.24■□□□□ 0.83
TOM1L1-221ENST00000575882 C11orf57Q6ZUT1 292 aaPredicted RBP20.24■□□□□ 0.83
TOM1L1-221ENST00000575882 NLRP2Q9NX02 1062 aa20.24■□□□□ 0.83
TOM1L1-221ENST00000575882 RGPD5Q99666 1765 aa20.24■□□□□ 0.83
TOM1L1-221ENST00000575882 SCN11AQ9UI33 1791 aa20.24■□□□□ 0.83
TOM1L1-221ENST00000575882 PTPDC1A2A3K4 754 aa20.23■□□□□ 0.83
TOM1L1-221ENST00000575882 CDC25BP30305 580 aa20.23■□□□□ 0.83
TOM1L1-221ENST00000575882 APOBRQ0VD83 1088 aa20.23■□□□□ 0.83
TOM1L1-221ENST00000575882 ATP2B3Q16720 1220 aa20.23■□□□□ 0.83
TOM1L1-221ENST00000575882 RCOR1Q9UKL0 485 aa20.23■□□□□ 0.83
TOM1L1-221ENST00000575882 CTDNEP1O95476 244 aa20.23■□□□□ 0.83
TOM1L1-221ENST00000575882 TTC5Q8N0Z6 440 aa20.23■□□□□ 0.83
TOM1L1-221ENST00000575882 TNNT1P13805 278 aa20.22■□□□□ 0.83
TOM1L1-221ENST00000575882 SLFNL1Q499Z3 407 aa20.22■□□□□ 0.83
TOM1L1-221ENST00000575882 GOLPH3LQ9H4A5 285 aa20.22■□□□□ 0.83
TOM1L1-221ENST00000575882 AFDNP55196 1824 aaKnown RBP20.22■□□□□ 0.83
TOM1L1-221ENST00000575882 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.22■□□□□ 0.83
TOM1L1-221ENST00000575882 CTAGE5O15320 804 aa20.22■□□□□ 0.83
TOM1L1-221ENST00000575882 STX1AQ16623 288 aa20.22■□□□□ 0.83
TOM1L1-221ENST00000575882 SARM1Q6SZW1 724 aa20.22■□□□□ 0.83
TOM1L1-221ENST00000575882 KRT28Q7Z3Y7 464 aa20.22■□□□□ 0.83
TOM1L1-221ENST00000575882 SMTNL1A8MU46 457 aa20.21■□□□□ 0.83
TOM1L1-221ENST00000575882 GOLIM4O00461 696 aa20.21■□□□□ 0.83
TOM1L1-221ENST00000575882 TATP17735 454 aaPredicted RBP20.21■□□□□ 0.83
TOM1L1-221ENST00000575882 CCT2P78371 535 aaKnown RBP20.21■□□□□ 0.83
TOM1L1-221ENST00000575882 LMBR1LQ6UX01 489 aa20.21■□□□□ 0.83
TOM1L1-221ENST00000575882 CCDC73Q6ZRK6 1079 aa20.21■□□□□ 0.83
TOM1L1-221ENST00000575882 USP28Q96RU2 1077 aa20.21■□□□□ 0.83
TOM1L1-221ENST00000575882 PALLDQ8WX93 1383 aa20.2■□□□□ 0.82
TOM1L1-221ENST00000575882 CASP7P55210 303 aa20.2■□□□□ 0.82
TOM1L1-221ENST00000575882 TPD52L1Q16890 204 aaPredicted RBP20.2■□□□□ 0.82
TOM1L1-221ENST00000575882 NEUROD6Q96NK8 337 aa20.2■□□□□ 0.82
TOM1L1-221ENST00000575882 PAG1Q9NWQ8 432 aa20.2■□□□□ 0.82
TOM1L1-221ENST00000575882 TRPM3Q9HCF6 1732 aaPredicted RBP20.2■□□□□ 0.82
TOM1L1-221ENST00000575882 SNW1Q13573 536 aaKnown RBP20.2■□□□□ 0.82
TOM1L1-221ENST00000575882 DSCC1Q9BVC3 393 aa20.2■□□□□ 0.82
TOM1L1-221ENST00000575882 NCOA5Q9HCD5 579 aaKnown RBP20.2■□□□□ 0.82
TOM1L1-221ENST00000575882 HELLSQ9NRZ9 838 aa20.2■□□□□ 0.82
TOM1L1-221ENST00000575882 NAP1L2Q9ULW6 460 aaPredicted RBP20.2■□□□□ 0.82
TOM1L1-221ENST00000575882 PPFIA3O75145 1194 aa20.19■□□□□ 0.82
TOM1L1-221ENST00000575882 EXOSC10Q01780 885 aaKnown RBP20.19■□□□□ 0.82
TOM1L1-221ENST00000575882 IFNL2Q8IZJ0 200 aa20.19■□□□□ 0.82
TOM1L1-221ENST00000575882 FMNL2Q96PY5 1086 aa20.19■□□□□ 0.82
TOM1L1-221ENST00000575882 LAMA4Q16363 1823 aa20.19■□□□□ 0.82
TOM1L1-221ENST00000575882 MEGF6O75095 1541 aa20.19■□□□□ 0.82
TOM1L1-221ENST00000575882 A0A0G2JLW4 131 aa20.19■□□□□ 0.82
TOM1L1-221ENST00000575882 KINO60870 393 aaKnown RBP20.19■□□□□ 0.82
TOM1L1-221ENST00000575882 NCBP1Q09161 790 aaKnown RBP20.19■□□□□ 0.82
TOM1L1-221ENST00000575882 LRRC8AQ8IWT6 810 aa20.19■□□□□ 0.82
TOM1L1-221ENST00000575882 MRFAP1L1Q96HT8 127 aa20.19■□□□□ 0.82
TOM1L1-221ENST00000575882 ZNF396Q96N95 335 aaPredicted RBP20.19■□□□□ 0.82
TOM1L1-221ENST00000575882 MYH15Q9Y2K3 1946 aa20.18■□□□□ 0.82
TOM1L1-221ENST00000575882 BECN2A8MW95 431 aa20.18■□□□□ 0.82
TOM1L1-221ENST00000575882 ZSCAN20P17040 1043 aaPredicted RBP20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms