RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 NKX2-3Q8TAU0 364 aa9.12□□□□□ -0.95
HERPUD1-217ENST00000569429 PSME4Q14997 1843 aa9.12□□□□□ -0.95
HERPUD1-217ENST00000569429 MYO9BQ13459 2157 aa9.12□□□□□ -0.95
HERPUD1-217ENST00000569429 ANKRD36CQ5JPF3 1778 aa9.12□□□□□ -0.95
HERPUD1-217ENST00000569429 ANGEL2Q5VTE6 544 aaKnown RBP9.11□□□□□ -0.95
HERPUD1-217ENST00000569429 NUTM1Q86Y26 1132 aa9.11□□□□□ -0.95
HERPUD1-217ENST00000569429 SP8Q8IXZ3 490 aa9.11□□□□□ -0.95
HERPUD1-217ENST00000569429 GDF15Q99988 308 aa9.11□□□□□ -0.95
HERPUD1-217ENST00000569429 IGF2BP3O00425 579 aaKnown RBP eCLIP9.1□□□□□ -0.95
HERPUD1-217ENST00000569429 MYCP01106 439 aaPredicted RBP9.1□□□□□ -0.95
HERPUD1-217ENST00000569429 CRHR2Q13324 411 aa9.1□□□□□ -0.95
HERPUD1-217ENST00000569429 SCARF1Q14162 830 aa9.1□□□□□ -0.95
HERPUD1-217ENST00000569429 NECTIN2Q92692 538 aa9.1□□□□□ -0.95
HERPUD1-217ENST00000569429 FMNL2Q96PY5 1086 aa9.1□□□□□ -0.95
HERPUD1-217ENST00000569429 IBTKQ9P2D0 1353 aaPredicted RBP9.1□□□□□ -0.95
HERPUD1-217ENST00000569429 DUOX1Q9NRD9 1551 aa9.09□□□□□ -0.95
HERPUD1-217ENST00000569429 TNFRSF10AO00220 468 aa9.09□□□□□ -0.95
HERPUD1-217ENST00000569429 EVI5O60447 810 aa9.09□□□□□ -0.95
HERPUD1-217ENST00000569429 GJA8P48165 433 aa9.09□□□□□ -0.95
HERPUD1-217ENST00000569429 PTPN12Q05209 780 aaKnown RBP9.09□□□□□ -0.95
HERPUD1-217ENST00000569429 TTLL12Q14166 644 aaPredicted RBP9.09□□□□□ -0.95
HERPUD1-217ENST00000569429 HLFQ16534 295 aa9.09□□□□□ -0.95
HERPUD1-217ENST00000569429 OTUD7BQ6GQQ9 843 aa9.09□□□□□ -0.95
HERPUD1-217ENST00000569429 FAM109BQ6ICB4 259 aaPredicted RBP9.09□□□□□ -0.95
HERPUD1-217ENST00000569429 SH3TC2Q8TF17 1288 aa9.09□□□□□ -0.95
HERPUD1-217ENST00000569429 GUCD1Q96NT3 240 aa9.09□□□□□ -0.95
HERPUD1-217ENST00000569429 ARIH1Q9Y4X5 557 aaPredicted RBP9.09□□□□□ -0.95
HERPUD1-217ENST00000569429 LAMB2P55268 1798 aa9.09□□□□□ -0.95
HERPUD1-217ENST00000569429 BBOX1O75936 387 aa9.08□□□□□ -0.96
HERPUD1-217ENST00000569429 ZBTB48P10074 688 aaPredicted RBP9.08□□□□□ -0.96
HERPUD1-217ENST00000569429 NF2P35240 595 aa9.08□□□□□ -0.96
HERPUD1-217ENST00000569429 PIP4K2AP48426 406 aaPredicted RBP9.08□□□□□ -0.96
HERPUD1-217ENST00000569429 BCAMP50895 628 aa9.08□□□□□ -0.96
HERPUD1-217ENST00000569429 ZNF280AP59817 542 aaPredicted RBP9.08□□□□□ -0.96
HERPUD1-217ENST00000569429 MAP3K12Q12852 859 aa9.08□□□□□ -0.96
HERPUD1-217ENST00000569429 LDLRAD1Q5T700 205 aa9.08□□□□□ -0.96
HERPUD1-217ENST00000569429 ARMC9Q7Z3E5 817 aa9.08□□□□□ -0.96
HERPUD1-217ENST00000569429 USP16Q9Y5T5 823 aa9.08□□□□□ -0.96
HERPUD1-217ENST00000569429 RTL9Q8NET4 1388 aa9.08□□□□□ -0.96
HERPUD1-217ENST00000569429 LRRC37AA6NMS7 1700 aa9.08□□□□□ -0.96
HERPUD1-217ENST00000569429 POTEB2H3BUK9 544 aa9.07□□□□□ -0.96
HERPUD1-217ENST00000569429 GJB1P08034 283 aa9.07□□□□□ -0.96
HERPUD1-217ENST00000569429 VIL1P09327 827 aaKnown RBP9.07□□□□□ -0.96
HERPUD1-217ENST00000569429 C3orf67Q6ZVT6 689 aa9.07□□□□□ -0.96
HERPUD1-217ENST00000569429 ZSWIM8A7E2V4 1837 aa9.07□□□□□ -0.96
HERPUD1-217ENST00000569429 SSC5DA1L4H1 1573 aa9.07□□□□□ -0.96
HERPUD1-217ENST00000569429 ABCC4O15439 1325 aa9.06□□□□□ -0.96
HERPUD1-217ENST00000569429 TMEM265A0A087WTH1 108 aa9.06□□□□□ -0.96
HERPUD1-217ENST00000569429 MTFR1Q15390 333 aa9.06□□□□□ -0.96
HERPUD1-217ENST00000569429 PRAMEF18Q5VWM3 479 aa9.06□□□□□ -0.96
HERPUD1-217ENST00000569429 TDHQ8IZJ6 230 aa9.06□□□□□ -0.96
HERPUD1-217ENST00000569429 NLRP3Q96P20 1036 aa9.06□□□□□ -0.96
HERPUD1-217ENST00000569429 DBNDD1Q9H9R9 158 aa9.06□□□□□ -0.96
HERPUD1-217ENST00000569429 FARP2O94887 1054 aaPredicted RBP9.05□□□□□ -0.96
HERPUD1-217ENST00000569429 MTHFSDQ2M296 383 aaKnown RBP9.05□□□□□ -0.96
HERPUD1-217ENST00000569429 WASHC4Q2M389 1173 aa9.05□□□□□ -0.96
HERPUD1-217ENST00000569429 KCNQ5Q9NR82 932 aa9.05□□□□□ -0.96
HERPUD1-217ENST00000569429 TESPA1A2RU30 521 aaPredicted RBP9.04□□□□□ -0.96
HERPUD1-217ENST00000569429 NBPF26B4DH59 902 aa9.04□□□□□ -0.96
HERPUD1-217ENST00000569429 ERVV-1B6SEH8 477 aa9.04□□□□□ -0.96
HERPUD1-217ENST00000569429 ECE2O60344 883 aa9.04□□□□□ -0.96
HERPUD1-217ENST00000569429 GNRH1P01148 92 aa9.04□□□□□ -0.96
HERPUD1-217ENST00000569429 CAPN2P17655 700 aa9.04□□□□□ -0.96
HERPUD1-217ENST00000569429 IL13P35225 146 aa9.04□□□□□ -0.96
HERPUD1-217ENST00000569429 PRMT2P55345 433 aa9.04□□□□□ -0.96
HERPUD1-217ENST00000569429 TEFQ10587 303 aa9.04□□□□□ -0.96
HERPUD1-217ENST00000569429 SUSD4Q5VX71 490 aa9.04□□□□□ -0.96
HERPUD1-217ENST00000569429 NBPF10Q6P3W6 841 aaKnown RBP9.04□□□□□ -0.96
HERPUD1-217ENST00000569429 AGBL3Q8NEM8 1001 aa9.04□□□□□ -0.96
HERPUD1-217ENST00000569429 SLC10A4Q96EP9 437 aa9.04□□□□□ -0.96
HERPUD1-217ENST00000569429 WNK4Q96J92 1243 aa9.04□□□□□ -0.96
HERPUD1-217ENST00000569429 SIN3AQ96ST3 1273 aa9.04□□□□□ -0.96
HERPUD1-217ENST00000569429 PTPN18Q99952 460 aa9.04□□□□□ -0.96
HERPUD1-217ENST00000569429 MYOZ2Q9NPC6 264 aa9.04□□□□□ -0.96
HERPUD1-217ENST00000569429 SCAF8Q9UPN6 1271 aaKnown RBP9.04□□□□□ -0.96
HERPUD1-217ENST00000569429 UBN2Q6ZU65 1347 aa9.04□□□□□ -0.96
HERPUD1-217ENST00000569429 IRS2Q9Y4H2 1338 aa9.04□□□□□ -0.96
HERPUD1-217ENST00000569429 NTSR2O95665 410 aa9.03□□□□□ -0.96
HERPUD1-217ENST00000569429 MAP3K11Q16584 847 aa9.03□□□□□ -0.96
HERPUD1-217ENST00000569429 CDCA8Q53HL2 280 aa9.03□□□□□ -0.96
HERPUD1-217ENST00000569429 TJAP1Q5JTD0 557 aa9.03□□□□□ -0.96
HERPUD1-217ENST00000569429 SLC10A5Q5PT55 438 aa9.03□□□□□ -0.96
HERPUD1-217ENST00000569429 TMC4Q7Z404 712 aa9.03□□□□□ -0.96
HERPUD1-217ENST00000569429 MAFAQ8NHW3 353 aaPredicted RBP9.03□□□□□ -0.96
HERPUD1-217ENST00000569429 UNCXA6NJT0 531 aa9.02□□□□□ -0.97
HERPUD1-217ENST00000569429 IL17REQ8NFR9 667 aa9.02□□□□□ -0.97
HERPUD1-217ENST00000569429 ANGEL1Q9UNK9 670 aaKnown RBP9.02□□□□□ -0.97
HERPUD1-217ENST00000569429 DOCK3Q8IZD9 2030 aa9.02□□□□□ -0.97
HERPUD1-217ENST00000569429 COL2A1P02458 1487 aaPredicted RBP9.02□□□□□ -0.97
HERPUD1-217ENST00000569429 RIMBP2O15034 1052 aa9.01□□□□□ -0.97
HERPUD1-217ENST00000569429 KCNQ3O43525 872 aa9.01□□□□□ -0.97
HERPUD1-217ENST00000569429 SNRPA1P09661 255 aaKnown RBP9.01□□□□□ -0.97
HERPUD1-217ENST00000569429 USP17L8P0C7I0 530 aa9.01□□□□□ -0.97
HERPUD1-217ENST00000569429 CCL5P13501 91 aa9.01□□□□□ -0.97
HERPUD1-217ENST00000569429 GRAPQ13588 217 aa9.01□□□□□ -0.97
HERPUD1-217ENST00000569429 PRKG1Q13976 671 aa9.01□□□□□ -0.97
HERPUD1-217ENST00000569429 RSBN1LQ6PCB5 846 aaPredicted RBP9.01□□□□□ -0.97
HERPUD1-217ENST00000569429 GRAPLQ8TC17 118 aaPredicted RBP9.01□□□□□ -0.97
HERPUD1-217ENST00000569429 U2AF1L4Q8WU68 220 aaKnown RBP9.01□□□□□ -0.97
HERPUD1-217ENST00000569429 GMLQ99445 158 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms