RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 ADAMTSL1Q8N6G6 1762 aa20.95■□□□□ 0.94
CLN6-208ENST00000567060 CSF1RP07333 972 aa20.95■□□□□ 0.94
CLN6-208ENST00000567060 RLBP1P12271 317 aa20.95■□□□□ 0.94
CLN6-208ENST00000567060 LBX1P52954 281 aa20.95■□□□□ 0.94
CLN6-208ENST00000567060 MAP1SQ66K74 1059 aaPredicted RBP20.95■□□□□ 0.94
CLN6-208ENST00000567060 DDX46Q7L014 1031 aaKnown RBP20.95■□□□□ 0.94
CLN6-208ENST00000567060 TMC4Q7Z404 712 aa20.95■□□□□ 0.94
CLN6-208ENST00000567060 RTKN2Q8IZC4 609 aa20.95■□□□□ 0.94
CLN6-208ENST00000567060 CNTROBQ8N137 903 aa20.95■□□□□ 0.94
CLN6-208ENST00000567060 TNNQ9UQP3 1299 aa20.95■□□□□ 0.94
CLN6-208ENST00000567060 RASSF10A6NK89 507 aa20.94■□□□□ 0.94
CLN6-208ENST00000567060 CENPBP07199 599 aaPredicted RBP20.94■□□□□ 0.94
CLN6-208ENST00000567060 RABL6Q3YEC7 729 aaPredicted RBP20.94■□□□□ 0.94
CLN6-208ENST00000567060 TTLL11Q8NHH1 800 aa20.94■□□□□ 0.94
CLN6-208ENST00000567060 AIDAQ96BJ3 306 aa20.94■□□□□ 0.94
CLN6-208ENST00000567060 PLIN1O60240 522 aa20.93■□□□□ 0.94
CLN6-208ENST00000567060 IARSP41252 1262 aaKnown RBP20.93■□□□□ 0.94
CLN6-208ENST00000567060 DEFB115Q30KQ5 88 aa20.93■□□□□ 0.94
CLN6-208ENST00000567060 GRIPAP1Q4V328 841 aa20.93■□□□□ 0.94
CLN6-208ENST00000567060 PANK1Q8TE04 598 aa20.93■□□□□ 0.94
CLN6-208ENST00000567060 ZBTB7BO15156 539 aaPredicted RBP20.92■□□□□ 0.94
CLN6-208ENST00000567060 BBOX1O75936 387 aa20.92■□□□□ 0.94
CLN6-208ENST00000567060 FOXO4P98177 505 aa20.92■□□□□ 0.94
CLN6-208ENST00000567060 PNMA8AQ86V59 439 aaPredicted RBP20.92■□□□□ 0.94
CLN6-208ENST00000567060 SUCLG2Q96I99 432 aa20.92■□□□□ 0.94
CLN6-208ENST00000567060 CDC5LQ99459 802 aaKnown RBP20.92■□□□□ 0.94
CLN6-208ENST00000567060 MEIS3Q99687 375 aa20.92■□□□□ 0.94
CLN6-208ENST00000567060 SNED1Q8TER0 1413 aa20.92■□□□□ 0.94
CLN6-208ENST00000567060 GNAI2P04899 355 aa20.91■□□□□ 0.94
CLN6-208ENST00000567060 HSPA8P11142 646 aaKnown RBP20.91■□□□□ 0.94
CLN6-208ENST00000567060 GRAPQ13588 217 aa20.91■□□□□ 0.94
CLN6-208ENST00000567060 CC2D2BQ6DHV5 1058 aa20.91■□□□□ 0.94
CLN6-208ENST00000567060 C3orf67Q6ZVT6 689 aa20.91■□□□□ 0.94
CLN6-208ENST00000567060 GRAPLQ8TC17 118 aaPredicted RBP20.91■□□□□ 0.94
CLN6-208ENST00000567060 JARID2Q92833 1246 aaPredicted RBP20.91■□□□□ 0.94
CLN6-208ENST00000567060 AAMPQ13685 434 aa20.9■□□□□ 0.94
CLN6-208ENST00000567060 GPC2Q8N158 579 aa20.9■□□□□ 0.94
CLN6-208ENST00000567060 WDR33Q9C0J8 1336 aaKnown RBP20.89■□□□□ 0.93
CLN6-208ENST00000567060 KAZALD1Q96I82 304 aa20.89■□□□□ 0.93
CLN6-208ENST00000567060 FMR1Q06787 632 aaKnown RBP eCLIP20.88■□□□□ 0.93
CLN6-208ENST00000567060 IFIT5Q13325 482 aaKnown RBP20.88■□□□□ 0.93
CLN6-208ENST00000567060 MTX1Q13505 466 aa20.88■□□□□ 0.93
CLN6-208ENST00000567060 CCDC57Q2TAC2 916 aa20.88■□□□□ 0.93
CLN6-208ENST00000567060 LMBR1LQ6UX01 489 aa20.88■□□□□ 0.93
CLN6-208ENST00000567060 PSMD1Q99460 953 aa20.88■□□□□ 0.93
CLN6-208ENST00000567060 TMX4Q9H1E5 349 aaPredicted RBP20.88■□□□□ 0.93
CLN6-208ENST00000567060 BICC1Q9H694 974 aaKnown RBP20.88■□□□□ 0.93
CLN6-208ENST00000567060 COG6Q9Y2V7 657 aa20.88■□□□□ 0.93
CLN6-208ENST00000567060 COL4A5P29400 1685 aa20.87■□□□□ 0.93
CLN6-208ENST00000567060 ANKRD18BA2A2Z9 1011 aa20.87■□□□□ 0.93
CLN6-208ENST00000567060 RPS8P62241 208 aaKnown RBP20.87■□□□□ 0.93
CLN6-208ENST00000567060 ABHD8Q96I13 439 aa20.87■□□□□ 0.93
CLN6-208ENST00000567060 GREM2Q9H772 168 aa20.87■□□□□ 0.93
CLN6-208ENST00000567060 SUPT16HQ9Y5B9 1047 aaKnown RBP20.87■□□□□ 0.93
CLN6-208ENST00000567060 LRRFIP2Q9Y608 721 aaKnown RBP20.87■□□□□ 0.93
CLN6-208ENST00000567060 ITGA6P23229 1130 aa20.86■□□□□ 0.93
CLN6-208ENST00000567060 EPHA10Q5JZY3 1008 aa20.86■□□□□ 0.93
CLN6-208ENST00000567060 SLC51AQ86UW1 340 aa20.86■□□□□ 0.93
CLN6-208ENST00000567060 ANKRD18AQ8IVF6 992 aa20.86■□□□□ 0.93
CLN6-208ENST00000567060 ANKRD44Q8N8A2 993 aa20.86■□□□□ 0.93
CLN6-208ENST00000567060 PPEF1O14829 653 aaPredicted RBP20.85■□□□□ 0.93
CLN6-208ENST00000567060 IGHMBP2P38935 993 aaKnown RBP20.85■□□□□ 0.93
CLN6-208ENST00000567060 MAP2K1Q02750 393 aaPredicted RBP20.85■□□□□ 0.93
CLN6-208ENST00000567060 FAM161AQ3B820 660 aa20.85■□□□□ 0.93
CLN6-208ENST00000567060 C20orf194Q5TEA3 1177 aa20.85■□□□□ 0.93
CLN6-208ENST00000567060 SP8Q8IXZ3 490 aa20.85■□□□□ 0.93
CLN6-208ENST00000567060 JDP2Q8WYK2 163 aa20.85■□□□□ 0.93
CLN6-208ENST00000567060 ZBTB40Q9NUA8 1239 aa20.85■□□□□ 0.93
CLN6-208ENST00000567060 FBXO3Q9UK99 471 aa20.85■□□□□ 0.93
CLN6-208ENST00000567060 ABT1Q9ULW3 272 aaKnown RBP20.85■□□□□ 0.93
CLN6-208ENST00000567060 LTBP1Q14766 1721 aa20.84■□□□□ 0.93
CLN6-208ENST00000567060 EPS15P42566 896 aa20.84■□□□□ 0.93
CLN6-208ENST00000567060 SCNN1DP51172 638 aa20.84■□□□□ 0.93
CLN6-208ENST00000567060 BSDC1Q9NW68 430 aaPredicted RBP20.84■□□□□ 0.93
CLN6-208ENST00000567060 CHMP3Q9Y3E7 222 aa20.84■□□□□ 0.93
CLN6-208ENST00000567060 ATP6V0A2Q9Y487 856 aa20.84■□□□□ 0.93
CLN6-208ENST00000567060 GJA3Q9Y6H8 435 aa20.84■□□□□ 0.93
CLN6-208ENST00000567060 CST9Q5W186 159 aa20.83■□□□□ 0.93
CLN6-208ENST00000567060 CELF1Q92879 486 aaKnown RBP20.83■□□□□ 0.93
CLN6-208ENST00000567060 SEC31BQ9NQW1 1179 aa20.83■□□□□ 0.93
CLN6-208ENST00000567060 EIF6P56537 245 aaKnown RBP20.82■□□□□ 0.92
CLN6-208ENST00000567060 RPAP2Q8IXW5 612 aaPredicted RBP20.82■□□□□ 0.92
CLN6-208ENST00000567060 MPHOSPH8Q99549 860 aa20.82■□□□□ 0.92
CLN6-208ENST00000567060 LRRC37AA6NMS7 1700 aa20.81■□□□□ 0.92
CLN6-208ENST00000567060 TAF7LQ5H9L4 462 aa20.81■□□□□ 0.92
CLN6-208ENST00000567060 CCDC85AQ96PX6 553 aaPredicted RBP20.81■□□□□ 0.92
CLN6-208ENST00000567060 TRAF5O00463 557 aa20.8■□□□□ 0.92
CLN6-208ENST00000567060 ATP8B2P98198 1209 aa20.8■□□□□ 0.92
CLN6-208ENST00000567060 CAPNS2Q96L46 248 aa20.8■□□□□ 0.92
CLN6-208ENST00000567060 SLC34A2O95436 690 aa20.79■□□□□ 0.92
CLN6-208ENST00000567060 CYP4F22Q6NT55 531 aa20.79■□□□□ 0.92
CLN6-208ENST00000567060 GPR101Q96P66 508 aaPredicted RBP20.79■□□□□ 0.92
CLN6-208ENST00000567060 TAF1P21675 1872 aa20.78■□□□□ 0.92
CLN6-208ENST00000567060 SRGAP3O43295 1099 aa20.78■□□□□ 0.92
CLN6-208ENST00000567060 HMMRO75330 724 aa20.78■□□□□ 0.92
CLN6-208ENST00000567060 LMOD1P29536 600 aaPredicted RBP20.78■□□□□ 0.92
CLN6-208ENST00000567060 USP50Q70EL3 339 aaPredicted RBP20.78■□□□□ 0.92
CLN6-208ENST00000567060 LARGE2Q8N3Y3 721 aa20.78■□□□□ 0.92
CLN6-208ENST00000567060 SUPT20HQ8NEM7 779 aa20.78■□□□□ 0.92
CLN6-208ENST00000567060 ANKRD2Q9GZV1 360 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms