RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-231	ENST00000564288	SLC8A3	P57103	927 aa		4.85	□□□□□ -1.63
MACF1-231	ENST00000564288	RASIP1	Q5U651	963 aa		4.85	□□□□□ -1.63
MACF1-231	ENST00000564288	CKAP2L	Q8IYA6	745 aa		4.85	□□□□□ -1.63
MACF1-231	ENST00000564288	SPAG1	Q07617	926 aa		4.85	□□□□□ -1.63
MACF1-231	ENST00000564288	DDX46	Q7L014	1031 aa	Known RBP	4.85	□□□□□ -1.63
MACF1-231	ENST00000564288	LZIC	Q8WZA0	190 aa		4.85	□□□□□ -1.63
MACF1-231	ENST00000564288	CEP131	Q9UPN4	1083 aa		4.85	□□□□□ -1.63
MACF1-231	ENST00000564288	PLA2R1	Q13018	1463 aa		4.85	□□□□□ -1.63
MACF1-231	ENST00000564288	SNCB	Q16143	134 aa		4.85	□□□□□ -1.63
MACF1-231	ENST00000564288	FAM177A1	Q8N128	213 aa	Predicted RBP	4.85	□□□□□ -1.63
MACF1-231	ENST00000564288	CAPN7	Q9Y6W3	813 aa		4.85	□□□□□ -1.63
MACF1-231	ENST00000564288	SMIM24	O75264	130 aa		4.85	□□□□□ -1.63
MACF1-231	ENST00000564288	CUL4A	Q13619	759 aa		4.85	□□□□□ -1.63
MACF1-231	ENST00000564288	ARHGEF5	Q12774	1597 aa		4.85	□□□□□ -1.63
MACF1-231	ENST00000564288	GOLGA8K	D6RF30	607 aa		4.85	□□□□□ -1.63
MACF1-231	ENST00000564288	TCHP	Q9BT92	498 aa		4.85	□□□□□ -1.63
MACF1-231	ENST00000564288	IQCG	Q9H095	443 aa	Known RBP	4.85	□□□□□ -1.63
MACF1-231	ENST00000564288	ELL2	O00472	640 aa	Predicted RBP	4.85	□□□□□ -1.63
MACF1-231	ENST00000564288	PPP1R2	P41236	205 aa		4.85	□□□□□ -1.63
MACF1-231	ENST00000564288	NBPF6	Q5VWK0	638 aa		4.85	□□□□□ -1.63
MACF1-231	ENST00000564288	NBPF5P	Q86XG9	351 aa	Predicted RBP	4.85	□□□□□ -1.63
MACF1-231	ENST00000564288	NBPF4	Q96M43	638 aa		4.85	□□□□□ -1.63
MACF1-231	ENST00000564288	GGA2	Q9UJY4	613 aa		4.85	□□□□□ -1.63
MACF1-231	ENST00000564288	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	4.85	□□□□□ -1.63
MACF1-231	ENST00000564288	TMEM57	Q8N5G2	664 aa		4.85	□□□□□ -1.63
MACF1-231	ENST00000564288	TBC1D22A	Q8WUA7	517 aa		4.85	□□□□□ -1.63
MACF1-231	ENST00000564288	CHCHD3	Q9NX63	227 aa	Known RBP	4.85	□□□□□ -1.63
MACF1-231	ENST00000564288	MYO1A	Q9UBC5	1043 aa		4.85	□□□□□ -1.63
MACF1-231	ENST00000564288	STIM2	Q9P246	746 aa		4.85	□□□□□ -1.63
MACF1-231	ENST00000564288	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	4.85	□□□□□ -1.63
MACF1-231	ENST00000564288	ZNF692	Q9BU19	519 aa	Predicted RBP	4.85	□□□□□ -1.63
MACF1-231	ENST00000564288	TRAK1	Q9UPV9	953 aa		4.84	□□□□□ -1.63
MACF1-231	ENST00000564288	ANO6	Q4KMQ2	910 aa		4.84	□□□□□ -1.63
MACF1-231	ENST00000564288	C6orf163	Q5TEZ5	329 aa		4.84	□□□□□ -1.63
MACF1-231	ENST00000564288	NOL8	Q76FK4	1167 aa	Known RBP	4.84	□□□□□ -1.63
MACF1-231	ENST00000564288	CCDC51	Q96ER9	411 aa		4.84	□□□□□ -1.63
MACF1-231	ENST00000564288	CAPS2	Q9BXY5	557 aa		4.84	□□□□□ -1.63
MACF1-231	ENST00000564288	HIP1R	O75146	1068 aa		4.84	□□□□□ -1.63
MACF1-231	ENST00000564288	RPS6KA5	O75582	802 aa		4.84	□□□□□ -1.63
MACF1-231	ENST00000564288	TSC1	Q92574	1164 aa		4.84	□□□□□ -1.63
MACF1-231	ENST00000564288	HOMER3	Q9NSC5	361 aa		4.84	□□□□□ -1.63
MACF1-231	ENST00000564288	ZEB2	O60315	1214 aa		4.84	□□□□□ -1.63
MACF1-231	ENST00000564288	MAP3K9	P80192	1104 aa		4.84	□□□□□ -1.63
MACF1-231	ENST00000564288	PDCD2	Q16342	344 aa	Predicted RBP	4.84	□□□□□ -1.63
MACF1-231	ENST00000564288	KIF5A	Q12840	1032 aa		4.84	□□□□□ -1.63
MACF1-231	ENST00000564288	RASEF	Q8IZ41	740 aa		4.84	□□□□□ -1.63
MACF1-231	ENST00000564288	TRIM58	Q8NG06	486 aa		4.84	□□□□□ -1.63
MACF1-231	ENST00000564288	CARD6	Q9BX69	1037 aa		4.84	□□□□□ -1.63
MACF1-231	ENST00000564288	LUC7L2	Q9Y383	392 aa	Known RBP	4.84	□□□□□ -1.63
MACF1-231	ENST00000564288	DNMT1	P26358	1616 aa	Known RBP	4.84	□□□□□ -1.63
MACF1-231	ENST00000564288	ABCC2	Q92887	1545 aa		4.84	□□□□□ -1.63
MACF1-231	ENST00000564288	AIMP1	Q12904	312 aa	Known RBP	4.84	□□□□□ -1.63
MACF1-231	ENST00000564288	RBM26	Q5T8P6	1007 aa	Known RBP	4.84	□□□□□ -1.63
MACF1-231	ENST00000564288	PLEKHM2	Q8IWE5	1019 aa		4.84	□□□□□ -1.63
MACF1-231	ENST00000564288	TTF2	Q9UNY4	1162 aa	Known RBP	4.84	□□□□□ -1.63
MACF1-231	ENST00000564288	CEP85L	Q5SZL2	805 aa		4.84	□□□□□ -1.63
MACF1-231	ENST00000564288	PCF11	O94913	1555 aa	Known RBP	4.84	□□□□□ -1.63
MACF1-231	ENST00000564288	SBNO1	A3KN83	1393 aa		4.84	□□□□□ -1.63
MACF1-231	ENST00000564288	ATP5H	O75947	161 aa		4.84	□□□□□ -1.63
MACF1-231	ENST00000564288	LACTB	P83111	547 aa	Predicted RBP	4.84	□□□□□ -1.63
MACF1-231	ENST00000564288	SEPT7	Q16181	437 aa	Known RBP	4.84	□□□□□ -1.63
MACF1-231	ENST00000564288	STX10	O60499	249 aa		4.84	□□□□□ -1.63
MACF1-231	ENST00000564288	ZBTB17	Q13105	803 aa		4.84	□□□□□ -1.63
MACF1-231	ENST00000564288	GTF3C6	Q969F1	213 aa		4.84	□□□□□ -1.63
MACF1-231	ENST00000564288	TEX11	Q8IYF3	940 aa		4.84	□□□□□ -1.63
MACF1-231	ENST00000564288	SLC4A2	P04920	1241 aa		4.84	□□□□□ -1.63
MACF1-231	ENST00000564288	RUBCN	Q92622	972 aa		4.84	□□□□□ -1.63
MACF1-231	ENST00000564288	CBX8	Q9HC52	389 aa		4.84	□□□□□ -1.63
MACF1-231	ENST00000564288	NBPF14	Q5TI25	921 aa		4.84	□□□□□ -1.64
MACF1-231	ENST00000564288	GBP5	Q96PP8	586 aa		4.84	□□□□□ -1.64
MACF1-231	ENST00000564288	BMP2K	Q9NSY1	1161 aa	Predicted RBP	4.84	□□□□□ -1.64
MACF1-231	ENST00000564288	STXBP3	O00186	592 aa		4.84	□□□□□ -1.64
MACF1-231	ENST00000564288	ALS2CR12	Q96Q35	445 aa		4.84	□□□□□ -1.64
MACF1-231	ENST00000564288	NOP2	P46087	812 aa	Known RBP	4.84	□□□□□ -1.64
MACF1-231	ENST00000564288	KLHL23	Q8NBE8	558 aa		4.84	□□□□□ -1.64
MACF1-231	ENST00000564288	OSBPL9	Q96SU4	736 aa		4.84	□□□□□ -1.64
MACF1-231	ENST00000564288	SETDB1	Q15047	1291 aa		4.84	□□□□□ -1.64
MACF1-231	ENST00000564288	PHLDB3	Q6NSJ2	640 aa		4.83	□□□□□ -1.64
MACF1-231	ENST00000564288	SCLT1	Q96NL6	688 aa		4.83	□□□□□ -1.64
MACF1-231	ENST00000564288	NUP58	Q9BVL2	599 aa		4.83	□□□□□ -1.64
MACF1-231	ENST00000564288	RABEP2	Q9H5N1	569 aa		4.83	□□□□□ -1.64
MACF1-231	ENST00000564288	CDC23	Q9UJX2	597 aa		4.83	□□□□□ -1.64
MACF1-231	ENST00000564288	SAMD9	Q5K651	1589 aa		4.83	□□□□□ -1.64
MACF1-231	ENST00000564288	AKR1B15	C9JRZ8	316 aa	Predicted RBP	4.83	□□□□□ -1.64
MACF1-231	ENST00000564288	THUMPD2	Q9BTF0	503 aa	Known RBP	4.83	□□□□□ -1.64
MACF1-231	ENST00000564288	SMTN	P53814	917 aa		4.83	□□□□□ -1.64
MACF1-231	ENST00000564288	TMTC2	Q8N394	836 aa		4.83	□□□□□ -1.64
MACF1-231	ENST00000564288	NPHP3	Q7Z494	1330 aa		4.83	□□□□□ -1.64
MACF1-231	ENST00000564288	FYB1	O15117	783 aa		4.83	□□□□□ -1.64
MACF1-231	ENST00000564288	OAS2	P29728	719 aa	Known RBP	4.83	□□□□□ -1.64
MACF1-231	ENST00000564288	HNRNPH1	P31943	449 aa	Known RBP	4.83	□□□□□ -1.64
MACF1-231	ENST00000564288	AMOTL1	Q8IY63	956 aa		4.83	□□□□□ -1.64
MACF1-231	ENST00000564288	PPFIBP2	Q8ND30	876 aa		4.83	□□□□□ -1.64
MACF1-231	ENST00000564288	KLC4	Q9NSK0	619 aa		4.83	□□□□□ -1.64
MACF1-231	ENST00000564288	TTC22	Q5TAA0	569 aa		4.83	□□□□□ -1.64
MACF1-231	ENST00000564288	CWC27	Q6UX04	472 aa	Known RBP	4.83	□□□□□ -1.64
MACF1-231	ENST00000564288	CLSTN2	Q9H4D0	955 aa		4.83	□□□□□ -1.64
MACF1-231	ENST00000564288	CEP128	Q6ZU80	1094 aa		4.83	□□□□□ -1.64
MACF1-231	ENST00000564288	RAB3IP	Q96QF0	476 aa	Predicted RBP	4.83	□□□□□ -1.64
MACF1-231	ENST00000564288	TMPO	P42166	694 aa	Known RBP	4.83	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms