RNA–Protein interactions for RNA: ENST00000564060.5

CMTM3-207, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-207ENST00000564060 ZC3H12CQ9C0D7 883 aaKnown RBP25.09■■□□□ 1.61
CMTM3-207ENST00000564060 TAF1DQ9H5J8 278 aaPredicted RBP25.09■■□□□ 1.61
CMTM3-207ENST00000564060 ANKRD18BA2A2Z9 1011 aa25.08■■□□□ 1.61
CMTM3-207ENST00000564060 BRPF1P55201 1214 aaPredicted RBP25.08■■□□□ 1.61
CMTM3-207ENST00000564060 TNIP1Q15025 636 aa25.08■■□□□ 1.61
CMTM3-207ENST00000564060 CIAPIN1Q6FI81 312 aa25.08■■□□□ 1.61
CMTM3-207ENST00000564060 PNMA8AQ86V59 439 aaPredicted RBP25.08■■□□□ 1.61
CMTM3-207ENST00000564060 PSME4Q14997 1843 aa25.07■■□□□ 1.6
CMTM3-207ENST00000564060 ATP2B4P23634 1241 aa25.07■■□□□ 1.6
CMTM3-207ENST00000564060 EPHX2P34913 555 aa25.07■■□□□ 1.6
CMTM3-207ENST00000564060 APLP1P51693 650 aa25.07■■□□□ 1.6
CMTM3-207ENST00000564060 IFIT5Q13325 482 aaKnown RBP25.07■■□□□ 1.6
CMTM3-207ENST00000564060 CHMP3Q9Y3E7 222 aa25.07■■□□□ 1.6
CMTM3-207ENST00000564060 A0A1B0GUL6 1792 aa25.06■■□□□ 1.6
CMTM3-207ENST00000564060 RIMBP2O15034 1052 aa25.06■■□□□ 1.6
CMTM3-207ENST00000564060 FOXO4P98177 505 aa25.06■■□□□ 1.6
CMTM3-207ENST00000564060 CXCL9Q07325 125 aa25.06■■□□□ 1.6
CMTM3-207ENST00000564060 LDHDQ86WU2 507 aa25.06■■□□□ 1.6
CMTM3-207ENST00000564060 UTYO14607 1347 aa25.06■■□□□ 1.6
CMTM3-207ENST00000564060 KIF16BQ96L93 1317 aa25.06■■□□□ 1.6
CMTM3-207ENST00000564060 ADAMTSL1Q8N6G6 1762 aa25.05■■□□□ 1.6
CMTM3-207ENST00000564060 G3V3G9 751 aa25.05■■□□□ 1.6
CMTM3-207ENST00000564060 DCAF8Q5TAQ9 597 aa25.05■■□□□ 1.6
CMTM3-207ENST00000564060 CHADLQ6NUI6 762 aa25.05■■□□□ 1.6
CMTM3-207ENST00000564060 MINPP1Q9UNW1 487 aa25.05■■□□□ 1.6
CMTM3-207ENST00000564060 RARSP54136 660 aaKnown RBP25.04■■□□□ 1.6
CMTM3-207ENST00000564060 CCDC57Q2TAC2 916 aa25.04■■□□□ 1.6
CMTM3-207ENST00000564060 API5Q9BZZ5 524 aaKnown RBP25.04■■□□□ 1.6
CMTM3-207ENST00000564060 ANKRD2Q9GZV1 360 aa25.04■■□□□ 1.6
CMTM3-207ENST00000564060 ECE2O60344 883 aa25.03■■□□□ 1.6
CMTM3-207ENST00000564060 SCNN1DP51172 638 aa25.03■■□□□ 1.6
CMTM3-207ENST00000564060 EAPPQ56P03 285 aaPredicted RBP25.03■■□□□ 1.6
CMTM3-207ENST00000564060 LMBR1LQ6UX01 489 aa25.03■■□□□ 1.6
CMTM3-207ENST00000564060 DBNDD1Q9H9R9 158 aa25.03■■□□□ 1.6
CMTM3-207ENST00000564060 ZBED9Q6R2W3 1325 aa25.03■■□□□ 1.6
CMTM3-207ENST00000564060 SCN9AQ15858 1988 aa25.02■■□□□ 1.6
CMTM3-207ENST00000564060 YDJCA8MPS7 323 aa25.02■■□□□ 1.6
CMTM3-207ENST00000564060 RAD17O75943 681 aa25.02■■□□□ 1.6
CMTM3-207ENST00000564060 CCT4P50991 539 aaKnown RBP25.02■■□□□ 1.6
CMTM3-207ENST00000564060 TAF7LQ5H9L4 462 aa25.02■■□□□ 1.6
CMTM3-207ENST00000564060 NOB1Q9ULX3 412 aaKnown RBP25.02■■□□□ 1.6
CMTM3-207ENST00000564060 LEMD3Q9Y2U8 911 aa25.02■■□□□ 1.6
CMTM3-207ENST00000564060 MED23Q9ULK4 1368 aa25.02■■□□□ 1.6
CMTM3-207ENST00000564060 NBPF7P0C2Y1 421 aaPredicted RBP25.01■■□□□ 1.59
CMTM3-207ENST00000564060 EPHA10Q5JZY3 1008 aa25■■□□□ 1.59
CMTM3-207ENST00000564060 SUCLG2Q96I99 432 aa25■■□□□ 1.59
CMTM3-207ENST00000564060 GPR101Q96P66 508 aaPredicted RBP25■■□□□ 1.59
CMTM3-207ENST00000564060 GPRC5DQ9NZD1 345 aa25■■□□□ 1.59
CMTM3-207ENST00000564060 GMPSP49915 693 aaPredicted RBP24.99■■□□□ 1.59
CMTM3-207ENST00000564060 DOK7Q18PE1 504 aa24.99■■□□□ 1.59
CMTM3-207ENST00000564060 USP50Q70EL3 339 aaPredicted RBP24.99■■□□□ 1.59
CMTM3-207ENST00000564060 ARHGAP45Q92619 1136 aa24.99■■□□□ 1.59
CMTM3-207ENST00000564060 ADARB2Q9NS39 739 aaKnown RBP24.99■■□□□ 1.59
CMTM3-207ENST00000564060 CLEC11AQ9Y240 323 aa24.99■■□□□ 1.59
CMTM3-207ENST00000564060 POTEIP0CG38 1075 aa24.98■■□□□ 1.59
CMTM3-207ENST00000564060 POTEJP0CG39 1038 aa24.98■■□□□ 1.59
CMTM3-207ENST00000564060 IPO8O15397 1037 aaKnown RBP24.97■■□□□ 1.59
CMTM3-207ENST00000564060 RPS12P25398 132 aaKnown RBP24.97■■□□□ 1.59
CMTM3-207ENST00000564060 EPS15P42566 896 aa24.97■■□□□ 1.59
CMTM3-207ENST00000564060 KCNJ4P48050 445 aa24.97■■□□□ 1.59
CMTM3-207ENST00000564060 CHRNDQ07001 517 aa24.97■■□□□ 1.59
CMTM3-207ENST00000564060 HDAC5Q9UQL6 1122 aa24.97■■□□□ 1.59
CMTM3-207ENST00000564060 ZNF804BA4D1E1 1349 aa24.96■■□□□ 1.59
CMTM3-207ENST00000564060 PSMD14O00487 310 aa24.96■■□□□ 1.59
CMTM3-207ENST00000564060 RABL6Q3YEC7 729 aaPredicted RBP24.96■■□□□ 1.59
CMTM3-207ENST00000564060 PODNQ7Z5L7 613 aa24.96■■□□□ 1.59
CMTM3-207ENST00000564060 DPF2Q92785 391 aa24.96■■□□□ 1.59
CMTM3-207ENST00000564060 USP44Q9H0E7 712 aa24.96■■□□□ 1.59
CMTM3-207ENST00000564060 BICC1Q9H694 974 aaKnown RBP24.96■■□□□ 1.59
CMTM3-207ENST00000564060 LDHAL6AQ6ZMR3 332 aa24.95■■□□□ 1.58
CMTM3-207ENST00000564060 KAZALD1Q96I82 304 aa24.95■■□□□ 1.58
CMTM3-207ENST00000564060 CNNM1Q9NRU3 951 aa24.95■■□□□ 1.58
CMTM3-207ENST00000564060 H7C1D1 291 aa24.94■■□□□ 1.58
CMTM3-207ENST00000564060 ZNF609O15014 1411 aa24.94■■□□□ 1.58
CMTM3-207ENST00000564060 COA1Q9GZY4 146 aa24.93■■□□□ 1.58
CMTM3-207ENST00000564060 CNOT7Q9UIV1 285 aaKnown RBP24.93■■□□□ 1.58
CMTM3-207ENST00000564060 UBTFL1P0CB47 393 aaPredicted RBP24.92■■□□□ 1.58
CMTM3-207ENST00000564060 ZNF594Q96JF6 807 aaPredicted RBP24.92■■□□□ 1.58
CMTM3-207ENST00000564060 TRPM7Q96QT4 1865 aa24.92■■□□□ 1.58
CMTM3-207ENST00000564060 VIL1P09327 827 aaKnown RBP24.91■■□□□ 1.58
CMTM3-207ENST00000564060 MICALL2Q8IY33 904 aa24.91■■□□□ 1.58
CMTM3-207ENST00000564060 ZBTB12Q9Y330 459 aaPredicted RBP24.91■■□□□ 1.58
CMTM3-207ENST00000564060 ZNF646O15015 1829 aaPredicted RBP24.91■■□□□ 1.58
CMTM3-207ENST00000564060 CNTROBQ8N137 903 aa24.9■■□□□ 1.58
CMTM3-207ENST00000564060 ANKRD44Q8N8A2 993 aa24.9■■□□□ 1.58
CMTM3-207ENST00000564060 PASKQ96RG2 1323 aa24.89■■□□□ 1.58
CMTM3-207ENST00000564060 USP17L3A6NCW0 530 aa24.89■■□□□ 1.58
CMTM3-207ENST00000564060 USP17L4A6NCW7 530 aa24.89■■□□□ 1.58
CMTM3-207ENST00000564060 MAP1SQ66K74 1059 aaPredicted RBP24.89■■□□□ 1.58
CMTM3-207ENST00000564060 INTS3Q68E01 1043 aaKnown RBP24.89■■□□□ 1.58
CMTM3-207ENST00000564060 ATF7IPQ6VMQ6 1270 aa24.89■■□□□ 1.58
CMTM3-207ENST00000564060 USP17L1Q7RTZ2 530 aa24.89■■□□□ 1.58
CMTM3-207ENST00000564060 AGBL3Q8NEM8 1001 aa24.89■■□□□ 1.58
CMTM3-207ENST00000564060 FRAT1Q92837 279 aaPredicted RBP24.89■■□□□ 1.58
CMTM3-207ENST00000564060 KCNQ5Q9NR82 932 aa24.89■■□□□ 1.58
CMTM3-207ENST00000564060 TAF5LO75529 589 aa24.88■■□□□ 1.57
CMTM3-207ENST00000564060 RSBN1LQ6PCB5 846 aaPredicted RBP24.88■■□□□ 1.57
CMTM3-207ENST00000564060 C15orf52Q6ZUT6 534 aaKnown RBP24.88■■□□□ 1.57
CMTM3-207ENST00000564060 ZC3H15Q8WU90 426 aaKnown RBP24.88■■□□□ 1.57
CMTM3-207ENST00000564060 MROH5Q6ZUA9 1318 aa24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms