RNA–Protein interactions for RNA: ENST00000563663.5

SCAMP2-203, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 1,787 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-203ENST00000563663 PODXL2Q9NZ53 605 aa18.47■□□□□ 0.55
SCAMP2-203ENST00000563663 MINPP1Q9UNW1 487 aa18.47■□□□□ 0.55
SCAMP2-203ENST00000563663 IFIT5Q13325 482 aaKnown RBP18.46■□□□□ 0.55
SCAMP2-203ENST00000563663 RNF181Q9P0P0 153 aa18.46■□□□□ 0.55
SCAMP2-203ENST00000563663 POLLQ9UGP5 575 aa18.46■□□□□ 0.55
SCAMP2-203ENST00000563663 ANKRD18BA2A2Z9 1011 aa18.45■□□□□ 0.54
SCAMP2-203ENST00000563663 MTX1Q13505 466 aa18.45■□□□□ 0.54
SCAMP2-203ENST00000563663 ZNF646O15015 1829 aaPredicted RBP18.45■□□□□ 0.54
SCAMP2-203ENST00000563663 SCN9AQ15858 1988 aa18.45■□□□□ 0.54
SCAMP2-203ENST00000563663 GNAI3P08754 354 aa18.45■□□□□ 0.54
SCAMP2-203ENST00000563663 MPNDQ8N594 471 aa18.45■□□□□ 0.54
SCAMP2-203ENST00000563663 PDE3AQ14432 1141 aa18.44■□□□□ 0.54
SCAMP2-203ENST00000563663 MVPQ14764 893 aaKnown RBP18.44■□□□□ 0.54
SCAMP2-203ENST00000563663 ITPRIPQ8IWB1 547 aa18.44■□□□□ 0.54
SCAMP2-203ENST00000563663 CHMP3Q9Y3E7 222 aa18.44■□□□□ 0.54
SCAMP2-203ENST00000563663 IRS2Q9Y4H2 1338 aa18.43■□□□□ 0.54
SCAMP2-203ENST00000563663 YY1P25490 414 aa18.43■□□□□ 0.54
SCAMP2-203ENST00000563663 IARSP41252 1262 aaKnown RBP18.43■□□□□ 0.54
SCAMP2-203ENST00000563663 CCDC57Q2TAC2 916 aa18.43■□□□□ 0.54
SCAMP2-203ENST00000563663 DPP8Q6V1X1 898 aaPredicted RBP18.43■□□□□ 0.54
SCAMP2-203ENST00000563663 KLHDC4Q8TBB5 520 aa18.43■□□□□ 0.54
SCAMP2-203ENST00000563663 TBC1D16Q8TBP0 767 aa18.43■□□□□ 0.54
SCAMP2-203ENST00000563663 PUS3Q9BZE2 481 aaKnown RBP18.43■□□□□ 0.54
SCAMP2-203ENST00000563663 ZC3H4Q9UPT8 1303 aaKnown RBP18.43■□□□□ 0.54
SCAMP2-203ENST00000563663 IGHMBP2P38935 993 aaKnown RBP18.42■□□□□ 0.54
SCAMP2-203ENST00000563663 PTPN12Q05209 780 aaKnown RBP18.42■□□□□ 0.54
SCAMP2-203ENST00000563663 ANP32EQ9BTT0 268 aa18.42■□□□□ 0.54
SCAMP2-203ENST00000563663 NSFL1CQ9UNZ2 370 aaKnown RBP18.42■□□□□ 0.54
SCAMP2-203ENST00000563663 COG6Q9Y2V7 657 aa18.42■□□□□ 0.54
SCAMP2-203ENST00000563663 PSME4Q14997 1843 aa18.42■□□□□ 0.54
SCAMP2-203ENST00000563663 MS4A1P11836 297 aa18.42■□□□□ 0.54
SCAMP2-203ENST00000563663 GPR101Q96P66 508 aaPredicted RBP18.42■□□□□ 0.54
SCAMP2-203ENST00000563663 RIPOR2Q9Y4F9 1068 aa18.42■□□□□ 0.54
SCAMP2-203ENST00000563663 XDHP47989 1333 aa18.41■□□□□ 0.54
SCAMP2-203ENST00000563663 CHRNDQ07001 517 aa18.41■□□□□ 0.54
SCAMP2-203ENST00000563663 KIAA2012Q0VF49 1180 aa18.41■□□□□ 0.54
SCAMP2-203ENST00000563663 GNAI2P04899 355 aa18.4■□□□□ 0.54
SCAMP2-203ENST00000563663 AOC3Q16853 763 aa18.4■□□□□ 0.54
SCAMP2-203ENST00000563663 VGLL2Q8N8G2 317 aa18.4■□□□□ 0.54
SCAMP2-203ENST00000563663 CRBNQ96SW2 442 aa18.4■□□□□ 0.54
SCAMP2-203ENST00000563663 C1orf115Q9H7X2 142 aa18.4■□□□□ 0.54
SCAMP2-203ENST00000563663 PNMA6EA0A0J9YXQ4 647 aa18.4■□□□□ 0.54
SCAMP2-203ENST00000563663 FZD9O00144 591 aa18.4■□□□□ 0.54
SCAMP2-203ENST00000563663 SNAP23O00161 211 aa18.4■□□□□ 0.54
SCAMP2-203ENST00000563663 LRRC24Q50LG9 513 aa18.4■□□□□ 0.54
SCAMP2-203ENST00000563663 MPHOSPH8Q99549 860 aa18.4■□□□□ 0.54
SCAMP2-203ENST00000563663 VPS33BQ9H267 617 aa18.4■□□□□ 0.54
SCAMP2-203ENST00000563663 ZBTB40Q9NUA8 1239 aa18.4■□□□□ 0.54
SCAMP2-203ENST00000563663 KLRK1P26718 216 aa18.39■□□□□ 0.53
SCAMP2-203ENST00000563663 LDHAL6AQ6ZMR3 332 aa18.39■□□□□ 0.53
SCAMP2-203ENST00000563663 ATG9AQ7Z3C6 839 aa18.39■□□□□ 0.53
SCAMP2-203ENST00000563663 ZNF784Q8NCA9 323 aaPredicted RBP18.39■□□□□ 0.53
SCAMP2-203ENST00000563663 ZNF541Q9H0D2 1346 aa18.39■□□□□ 0.53
SCAMP2-203ENST00000563663 WDR90Q96KV7 1748 aa18.39■□□□□ 0.53
SCAMP2-203ENST00000563663 UFL1O94874 794 aa18.38■□□□□ 0.53
SCAMP2-203ENST00000563663 COPRSQ9NQ92 184 aa18.38■□□□□ 0.53
SCAMP2-203ENST00000563663 YDJCA8MPS7 323 aa18.37■□□□□ 0.53
SCAMP2-203ENST00000563663 PPIP5K2O43314 1243 aa18.37■□□□□ 0.53
SCAMP2-203ENST00000563663 TXNRD3Q86VQ6 643 aa18.37■□□□□ 0.53
SCAMP2-203ENST00000563663 SUPT20HQ8NEM7 779 aa18.37■□□□□ 0.53
SCAMP2-203ENST00000563663 ANKIB1Q9P2G1 1089 aa18.37■□□□□ 0.53
SCAMP2-203ENST00000563663 GGA1Q9UJY5 639 aa18.37■□□□□ 0.53
SCAMP2-203ENST00000563663 DDX19BQ9UMR2 479 aa18.37■□□□□ 0.53
SCAMP2-203ENST00000563663 PA2G4Q9UQ80 394 aaKnown RBP18.37■□□□□ 0.53
SCAMP2-203ENST00000563663 MED23Q9ULK4 1368 aa18.37■□□□□ 0.53
SCAMP2-203ENST00000563663 TAF5LO75529 589 aa18.37■□□□□ 0.53
SCAMP2-203ENST00000563663 POLA2Q14181 598 aa18.37■□□□□ 0.53
SCAMP2-203ENST00000563663 HELBQ8NG08 1087 aaPredicted RBP18.37■□□□□ 0.53
SCAMP2-203ENST00000563663 TMX4Q9H1E5 349 aaPredicted RBP18.37■□□□□ 0.53
SCAMP2-203ENST00000563663 HDAC5Q9UQL6 1122 aa18.37■□□□□ 0.53
SCAMP2-203ENST00000563663 SRGAP3O43295 1099 aa18.36■□□□□ 0.53
SCAMP2-203ENST00000563663 ATP2B4P23634 1241 aa18.36■□□□□ 0.53
SCAMP2-203ENST00000563663 LARGE2Q8N3Y3 721 aa18.36■□□□□ 0.53
SCAMP2-203ENST00000563663 SSH3Q8TE77 659 aa18.36■□□□□ 0.53
SCAMP2-203ENST00000563663 ARAP2Q8WZ64 1704 aa18.35■□□□□ 0.53
SCAMP2-203ENST00000563663 EYA2O00167 538 aa18.35■□□□□ 0.53
SCAMP2-203ENST00000563663 WASHC4Q2M389 1173 aa18.35■□□□□ 0.53
SCAMP2-203ENST00000563663 CEP85Q6P2H3 762 aa18.35■□□□□ 0.53
SCAMP2-203ENST00000563663 ANKRD2Q9GZV1 360 aa18.35■□□□□ 0.53
SCAMP2-203ENST00000563663 LEMD3Q9Y2U8 911 aa18.35■□□□□ 0.53
SCAMP2-203ENST00000563663 C6orf229H3BNL8 230 aa18.35■□□□□ 0.53
SCAMP2-203ENST00000563663 TAF7LQ5H9L4 462 aa18.35■□□□□ 0.53
SCAMP2-203ENST00000563663 SIRT2Q8IXJ6 389 aa18.35■□□□□ 0.53
SCAMP2-203ENST00000563663 CNNM1Q9NRU3 951 aa18.35■□□□□ 0.53
SCAMP2-203ENST00000563663 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.35■□□□□ 0.53
SCAMP2-203ENST00000563663 ZNF804BA4D1E1 1349 aa18.34■□□□□ 0.53
SCAMP2-203ENST00000563663 GLTPD2A6NH11 291 aa18.34■□□□□ 0.53
SCAMP2-203ENST00000563663 CIAO1O76071 339 aa18.34■□□□□ 0.53
SCAMP2-203ENST00000563663 ATP8B2P98198 1209 aa18.34■□□□□ 0.53
SCAMP2-203ENST00000563663 C15orf52Q6ZUT6 534 aaKnown RBP18.34■□□□□ 0.53
SCAMP2-203ENST00000563663 FBXO3Q9UK99 471 aa18.34■□□□□ 0.53
SCAMP2-203ENST00000563663 POTECB2RU33 542 aa18.33■□□□□ 0.53
SCAMP2-203ENST00000563663 MROH5Q6ZUA9 1318 aa18.33■□□□□ 0.52
SCAMP2-203ENST00000563663 RIMBP2O15034 1052 aa18.32■□□□□ 0.52
SCAMP2-203ENST00000563663 AAMPQ13685 434 aa18.32■□□□□ 0.52
SCAMP2-203ENST00000563663 CENPQQ7L2Z9 268 aaPredicted RBP18.32■□□□□ 0.52
SCAMP2-203ENST00000563663 DBNDD1Q9H9R9 158 aa18.32■□□□□ 0.52
SCAMP2-203ENST00000563663 ZNRF3Q9ULT6 936 aa18.32■□□□□ 0.52
SCAMP2-203ENST00000563663 KDM2BQ8NHM5 1336 aa18.32■□□□□ 0.52
SCAMP2-203ENST00000563663 FGFR2P21802 821 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms