RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 CTBSQ01459 385 aa5.15□□□□□ -1.59
SPG11-225ENST00000561391 CENPCQ03188 943 aa5.15□□□□□ -1.59
SPG11-225ENST00000561391 NBPF8Q3BBV2 869 aa5.15□□□□□ -1.59
SPG11-225ENST00000561391 CDCA8Q53HL2 280 aa5.15□□□□□ -1.59
SPG11-225ENST00000561391 NBPF11Q86T75 865 aa5.15□□□□□ -1.59
SPG11-225ENST00000561391 UNC5CLQ8IV45 518 aa5.15□□□□□ -1.59
SPG11-225ENST00000561391 UCN2Q96RP3 112 aa5.15□□□□□ -1.59
SPG11-225ENST00000561391 BRWD3Q6RI45 1802 aa5.15□□□□□ -1.59
SPG11-225ENST00000561391 ZNF644Q9H582 1327 aaPredicted RBP5.15□□□□□ -1.59
SPG11-225ENST00000561391 TET3O43151 1660 aa5.15□□□□□ -1.59
SPG11-225ENST00000561391 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.14□□□□□ -1.59
SPG11-225ENST00000561391 FAM83GA6ND36 823 aa5.14□□□□□ -1.59
SPG11-225ENST00000561391 BNIP3LO60238 219 aa5.14□□□□□ -1.59
SPG11-225ENST00000561391 MYCP01106 439 aaPredicted RBP5.14□□□□□ -1.59
SPG11-225ENST00000561391 IL2RAP01589 272 aa5.14□□□□□ -1.59
SPG11-225ENST00000561391 UBAP2LQ14157 1087 aaKnown RBP5.14□□□□□ -1.59
SPG11-225ENST00000561391 TSGA10IPQ3SY00 556 aa5.14□□□□□ -1.59
SPG11-225ENST00000561391 C4orf17Q53FE4 359 aa5.14□□□□□ -1.59
SPG11-225ENST00000561391 FIGNL1Q6PIW4 674 aa5.14□□□□□ -1.59
SPG11-225ENST00000561391 DEPDC4Q8N2C3 294 aa5.14□□□□□ -1.59
SPG11-225ENST00000561391 CAMKK2Q96RR4 588 aa5.14□□□□□ -1.59
SPG11-225ENST00000561391 KRTAP4-9Q9BYQ8 210 aa5.14□□□□□ -1.59
SPG11-225ENST00000561391 PREX2Q70Z35 1606 aa5.14□□□□□ -1.59
SPG11-225ENST00000561391 ERVK-7P63135 1459 aa5.13□□□□□ -1.59
SPG11-225ENST00000561391 CAMSAP2Q08AD1 1489 aa5.13□□□□□ -1.59
SPG11-225ENST00000561391 RALGAPBQ86X10 1494 aa5.13□□□□□ -1.59
SPG11-225ENST00000561391 ATP9BO43861 1147 aa5.13□□□□□ -1.59
SPG11-225ENST00000561391 APBA3O96018 575 aa5.13□□□□□ -1.59
SPG11-225ENST00000561391 SPATA31C1P0DKV0 1188 aa5.13□□□□□ -1.59
SPG11-225ENST00000561391 ADH6P28332 368 aa5.13□□□□□ -1.59
SPG11-225ENST00000561391 IDI1Q13907 227 aa5.13□□□□□ -1.59
SPG11-225ENST00000561391 SYT17Q9BSW7 474 aa5.13□□□□□ -1.59
SPG11-225ENST00000561391 ZFP64Q9NPA5 681 aa5.13□□□□□ -1.59
SPG11-225ENST00000561391 PTCH1Q13635 1447 aa5.13□□□□□ -1.59
SPG11-225ENST00000561391 NCOA3Q9Y6Q9 1424 aa5.13□□□□□ -1.59
SPG11-225ENST00000561391 ASXL1Q8IXJ9 1541 aa5.13□□□□□ -1.59
SPG11-225ENST00000561391 UNC13BO14795 1591 aa5.12□□□□□ -1.59
SPG11-225ENST00000561391 INO80Q9ULG1 1556 aaPredicted RBP5.12□□□□□ -1.59
SPG11-225ENST00000561391 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.12□□□□□ -1.59
SPG11-225ENST00000561391 SPDYE3A6NKU9 549 aa5.12□□□□□ -1.59
SPG11-225ENST00000561391 TRIM37O94972 964 aa5.12□□□□□ -1.59
SPG11-225ENST00000561391 GPR162Q16538 588 aa5.12□□□□□ -1.59
SPG11-225ENST00000561391 OXLD1Q5BKU9 147 aa5.12□□□□□ -1.59
SPG11-225ENST00000561391 ESCO1Q5FWF5 840 aa5.12□□□□□ -1.59
SPG11-225ENST00000561391 CFAP70Q5T0N1 1121 aa5.12□□□□□ -1.59
SPG11-225ENST00000561391 PHTF2Q8N3S3 785 aa5.12□□□□□ -1.59
SPG11-225ENST00000561391 PLPP7Q8NBV4 271 aa5.12□□□□□ -1.59
SPG11-225ENST00000561391 RHBDD1Q8TEB9 315 aa5.12□□□□□ -1.59
SPG11-225ENST00000561391 KRTAP4-2Q9BYR5 136 aa5.12□□□□□ -1.59
SPG11-225ENST00000561391 DOLKQ9UPQ8 538 aa5.12□□□□□ -1.59
SPG11-225ENST00000561391 CHD4Q14839 1912 aa5.12□□□□□ -1.59
SPG11-225ENST00000561391 KIAA1107Q9UPP5 1409 aa5.12□□□□□ -1.59
SPG11-225ENST00000561391 ARHGAP35Q9NRY4 1499 aa5.12□□□□□ -1.59
SPG11-225ENST00000561391 MROH1Q8NDA8 1641 aa5.12□□□□□ -1.59
SPG11-225ENST00000561391 DCDC2BA2VCK2 349 aa5.11□□□□□ -1.59
SPG11-225ENST00000561391 USP17L5A8MUK1 530 aa5.11□□□□□ -1.59
SPG11-225ENST00000561391 PLA2G4AP47712 749 aa5.11□□□□□ -1.59
SPG11-225ENST00000561391 RSPO4Q2I0M5 234 aaPredicted RBP5.11□□□□□ -1.59
SPG11-225ENST00000561391 PRRT3Q5FWE3 981 aa5.11□□□□□ -1.59
SPG11-225ENST00000561391 CCDC85AQ96PX6 553 aaPredicted RBP5.11□□□□□ -1.59
SPG11-225ENST00000561391 CDCA7Q9BWT1 371 aaPredicted RBP5.11□□□□□ -1.59
SPG11-225ENST00000561391 PLVAPQ9BX97 442 aa5.11□□□□□ -1.59
SPG11-225ENST00000561391 FHDC1Q9C0D6 1143 aaPredicted RBP5.11□□□□□ -1.59
SPG11-225ENST00000561391 CRISPLD1Q9H336 500 aa5.11□□□□□ -1.59
SPG11-225ENST00000561391 NDFIP2Q9NV92 336 aa5.11□□□□□ -1.59
SPG11-225ENST00000561391 AMOTL2Q9Y2J4 779 aa5.11□□□□□ -1.59
SPG11-225ENST00000561391 TBX22Q9Y458 520 aa5.11□□□□□ -1.59
SPG11-225ENST00000561391 PCDHGC4Q9Y5F7 938 aa5.11□□□□□ -1.59
SPG11-225ENST00000561391 MAFBQ9Y5Q3 323 aaPredicted RBP5.11□□□□□ -1.59
SPG11-225ENST00000561391 ACIN1Q9UKV3 1341 aaKnown RBP5.11□□□□□ -1.59
SPG11-225ENST00000561391 GLI3P10071 1580 aa5.11□□□□□ -1.59
SPG11-225ENST00000561391 CDC42BPAQ5VT25 1732 aa5.11□□□□□ -1.59
SPG11-225ENST00000561391 USP17L3A6NCW0 530 aa5.1□□□□□ -1.59
SPG11-225ENST00000561391 USP17L4A6NCW7 530 aa5.1□□□□□ -1.59
SPG11-225ENST00000561391 CHD2O14647 1828 aaKnown RBP5.1□□□□□ -1.59
SPG11-225ENST00000561391 ZBTB7AO95365 584 aa5.1□□□□□ -1.59
SPG11-225ENST00000561391 NCOA4Q13772 614 aa5.1□□□□□ -1.59
SPG11-225ENST00000561391 TLR1Q15399 786 aa5.1□□□□□ -1.59
SPG11-225ENST00000561391 ARTNQ5T4W7 220 aa5.1□□□□□ -1.59
SPG11-225ENST00000561391 USP17L2Q6R6M4 530 aa5.1□□□□□ -1.59
SPG11-225ENST00000561391 USP17L1Q7RTZ2 530 aa5.1□□□□□ -1.59
SPG11-225ENST00000561391 DNAJC5GQ8N7S2 189 aa5.1□□□□□ -1.59
SPG11-225ENST00000561391 NFATC2IPQ8NCF5 419 aa5.1□□□□□ -1.59
SPG11-225ENST00000561391 TRIM11Q96F44 468 aa5.1□□□□□ -1.59
SPG11-225ENST00000561391 ORAI2Q96SN7 254 aa5.1□□□□□ -1.59
SPG11-225ENST00000561391 VRTNQ9H8Y1 702 aa5.1□□□□□ -1.59
SPG11-225ENST00000561391 GPATCH8Q9UKJ3 1502 aaKnown RBP5.1□□□□□ -1.59
SPG11-225ENST00000561391 MST1RQ04912 1400 aa5.09□□□□□ -1.59
SPG11-225ENST00000561391 ATXN7O15265 892 aaPredicted RBP5.09□□□□□ -1.59
SPG11-225ENST00000561391 DYRK3O43781 588 aa5.09□□□□□ -1.59
SPG11-225ENST00000561391 CD33P20138 364 aa5.09□□□□□ -1.59
SPG11-225ENST00000561391 VPS72Q15906 364 aa5.09□□□□□ -1.59
SPG11-225ENST00000561391 EML3Q32P44 896 aa5.09□□□□□ -1.59
SPG11-225ENST00000561391 MAP7D1Q3KQU3 841 aa5.09□□□□□ -1.59
SPG11-225ENST00000561391 FOXD4L6Q3SYB3 417 aaPredicted RBP5.09□□□□□ -1.59
SPG11-225ENST00000561391 FOXD4L3Q6VB84 417 aaPredicted RBP5.09□□□□□ -1.59
SPG11-225ENST00000561391 FCHSD1Q86WN1 690 aa5.09□□□□□ -1.59
SPG11-225ENST00000561391 ZNF526Q8TF50 670 aaPredicted RBP5.09□□□□□ -1.59
SPG11-225ENST00000561391 PBXIP1Q96AQ6 731 aa5.09□□□□□ -1.59
SPG11-225ENST00000561391 ZCCHC2Q9C0B9 1178 aaKnown RBP5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms