RNA–Protein interactions for RNA: ENST00000560496.5

SNRPA1-212, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-212ENST00000560496 WBP1LQ9NX94 342 aa13.09□□□□□ -0.31
SNRPA1-212ENST00000560496 ZBTB12Q9Y330 459 aaPredicted RBP13.09□□□□□ -0.31
SNRPA1-212ENST00000560496 TLL2Q9Y6L7 1015 aa13.09□□□□□ -0.31
SNRPA1-212ENST00000560496 FANCIQ9NVI1 1328 aa13.09□□□□□ -0.31
SNRPA1-212ENST00000560496 PI4KAP2A4QPH2 592 aa13.08□□□□□ -0.32
SNRPA1-212ENST00000560496 RIMBP2O15034 1052 aa13.08□□□□□ -0.32
SNRPA1-212ENST00000560496 DDX58O95786 925 aaKnown RBP13.08□□□□□ -0.32
SNRPA1-212ENST00000560496 EGFRP00533 1210 aa13.08□□□□□ -0.32
SNRPA1-212ENST00000560496 RPS8P62241 208 aaKnown RBP13.08□□□□□ -0.32
SNRPA1-212ENST00000560496 TWISTNBQ3B726 338 aaPredicted RBP13.08□□□□□ -0.32
SNRPA1-212ENST00000560496 CCDC152Q4G0S7 254 aa13.08□□□□□ -0.32
SNRPA1-212ENST00000560496 PI4KAP1Q8N8J0 262 aa13.08□□□□□ -0.32
SNRPA1-212ENST00000560496 BCL2L13Q9BXK5 485 aa13.08□□□□□ -0.32
SNRPA1-212ENST00000560496 ECM29Q5VYK3 1845 aa13.08□□□□□ -0.32
SNRPA1-212ENST00000560496 ARAP2Q8WZ64 1704 aa13.08□□□□□ -0.32
SNRPA1-212ENST00000560496 C6orf229H3BNL8 230 aa13.07□□□□□ -0.32
SNRPA1-212ENST00000560496 CTSWP56202 376 aa13.07□□□□□ -0.32
SNRPA1-212ENST00000560496 CWF19L2Q2TBE0 894 aaKnown RBP13.07□□□□□ -0.32
SNRPA1-212ENST00000560496 NCBP3Q53F19 620 aaKnown RBP13.07□□□□□ -0.32
SNRPA1-212ENST00000560496 CYP4F22Q6NT55 531 aa13.07□□□□□ -0.32
SNRPA1-212ENST00000560496 KSR2Q6VAB6 950 aa13.07□□□□□ -0.32
SNRPA1-212ENST00000560496 G2E3Q7L622 706 aa13.07□□□□□ -0.32
SNRPA1-212ENST00000560496 ZC3H15Q8WU90 426 aaKnown RBP13.07□□□□□ -0.32
SNRPA1-212ENST00000560496 DPF2Q92785 391 aa13.07□□□□□ -0.32
SNRPA1-212ENST00000560496 CCDC85AQ96PX6 553 aaPredicted RBP13.07□□□□□ -0.32
SNRPA1-212ENST00000560496 EYA3Q99504 573 aa13.07□□□□□ -0.32
SNRPA1-212ENST00000560496 KCNQ5Q9NR82 932 aa13.07□□□□□ -0.32
SNRPA1-212ENST00000560496 CNOT7Q9UIV1 285 aaKnown RBP13.07□□□□□ -0.32
SNRPA1-212ENST00000560496 NEURL1BA8MQ27 555 aa13.06□□□□□ -0.32
SNRPA1-212ENST00000560496 UFL1O94874 794 aa13.06□□□□□ -0.32
SNRPA1-212ENST00000560496 HSPA8P11142 646 aaKnown RBP13.06□□□□□ -0.32
SNRPA1-212ENST00000560496 HSP90B1P14625 803 aaKnown RBP13.06□□□□□ -0.32
SNRPA1-212ENST00000560496 DOK7Q18PE1 504 aa13.06□□□□□ -0.32
SNRPA1-212ENST00000560496 SAPCD2Q86UD0 394 aa13.06□□□□□ -0.32
SNRPA1-212ENST00000560496 CAPNS2Q96L46 248 aa13.06□□□□□ -0.32
SNRPA1-212ENST00000560496 MRS2Q9HD23 443 aa13.06□□□□□ -0.32
SNRPA1-212ENST00000560496 PRDM10Q9NQV6 1147 aa13.06□□□□□ -0.32
SNRPA1-212ENST00000560496 MED23Q9ULK4 1368 aa13.06□□□□□ -0.32
SNRPA1-212ENST00000560496 PAPPA2Q9BXP8 1791 aa13.05□□□□□ -0.32
SNRPA1-212ENST00000560496 CELF2O95319 508 aaKnown RBP13.05□□□□□ -0.32
SNRPA1-212ENST00000560496 RPS12P25398 132 aaKnown RBP13.05□□□□□ -0.32
SNRPA1-212ENST00000560496 CTCFP49711 727 aaPredicted RBP13.05□□□□□ -0.32
SNRPA1-212ENST00000560496 SAMD7Q7Z3H4 446 aa13.05□□□□□ -0.32
SNRPA1-212ENST00000560496 AIDAQ96BJ3 306 aa13.05□□□□□ -0.32
SNRPA1-212ENST00000560496 STK31Q9BXU1 1019 aa13.05□□□□□ -0.32
SNRPA1-212ENST00000560496 CHMP4AQ9BY43 222 aa13.05□□□□□ -0.32
SNRPA1-212ENST00000560496 GGA1Q9UJY5 639 aa13.05□□□□□ -0.32
SNRPA1-212ENST00000560496 XDHP47989 1333 aa13.05□□□□□ -0.32
SNRPA1-212ENST00000560496 CAPN15O75808 1086 aa13.04□□□□□ -0.32
SNRPA1-212ENST00000560496 CASP7P55210 303 aa13.04□□□□□ -0.32
SNRPA1-212ENST00000560496 FLIIQ13045 1269 aa13.04□□□□□ -0.32
SNRPA1-212ENST00000560496 TBC1D10BQ4KMP7 808 aaPredicted RBP13.04□□□□□ -0.32
SNRPA1-212ENST00000560496 DLK2Q6UY11 383 aa13.04□□□□□ -0.32
SNRPA1-212ENST00000560496 ANKRD18AQ8IVF6 992 aa13.04□□□□□ -0.32
SNRPA1-212ENST00000560496 TTLL11Q8NHH1 800 aa13.04□□□□□ -0.32
SNRPA1-212ENST00000560496 GREM2Q9H772 168 aa13.04□□□□□ -0.32
SNRPA1-212ENST00000560496 LAMB1P07942 1786 aa13.04□□□□□ -0.32
SNRPA1-212ENST00000560496 H7C1D1 291 aa13.03□□□□□ -0.32
SNRPA1-212ENST00000560496 VIL1P09327 827 aaKnown RBP13.03□□□□□ -0.32
SNRPA1-212ENST00000560496 ECE1P42892 770 aa13.03□□□□□ -0.32
SNRPA1-212ENST00000560496 KIF4BQ2VIQ3 1234 aa13.03□□□□□ -0.32
SNRPA1-212ENST00000560496 CDC37L1Q7L3B6 337 aa13.03□□□□□ -0.32
SNRPA1-212ENST00000560496 HHIPL1Q96JK4 782 aa13.03□□□□□ -0.32
SNRPA1-212ENST00000560496 ANKIB1Q9P2G1 1089 aa13.03□□□□□ -0.32
SNRPA1-212ENST00000560496 WTIPA6NIX2 430 aaPredicted RBP13.02□□□□□ -0.33
SNRPA1-212ENST00000560496 ADM5C9JUS6 153 aa13.02□□□□□ -0.33
SNRPA1-212ENST00000560496 H7C1W4 665 aa13.02□□□□□ -0.33
SNRPA1-212ENST00000560496 AOC2O75106 756 aa13.02□□□□□ -0.33
SNRPA1-212ENST00000560496 SLC4A2P04920 1241 aa13.02□□□□□ -0.33
SNRPA1-212ENST00000560496 LBX1P52954 281 aa13.02□□□□□ -0.33
SNRPA1-212ENST00000560496 MAP2K1Q02750 393 aaPredicted RBP13.02□□□□□ -0.33
SNRPA1-212ENST00000560496 NEXNQ0ZGT2 675 aa13.02□□□□□ -0.33
SNRPA1-212ENST00000560496 PAXIP1Q6ZW49 1069 aaPredicted RBP13.02□□□□□ -0.33
SNRPA1-212ENST00000560496 UBE3BQ7Z3V4 1068 aa13.02□□□□□ -0.33
SNRPA1-212ENST00000560496 CDC5LQ99459 802 aaKnown RBP13.02□□□□□ -0.33
SNRPA1-212ENST00000560496 PLA2G12BQ9BX93 195 aa13.02□□□□□ -0.33
SNRPA1-212ENST00000560496 ZC3H12CQ9C0D7 883 aaKnown RBP13.02□□□□□ -0.33
SNRPA1-212ENST00000560496 ZNF408Q9H9D4 720 aa13.02□□□□□ -0.33
SNRPA1-212ENST00000560496 SPINK5Q9NQ38 1064 aaPredicted RBP13.02□□□□□ -0.33
SNRPA1-212ENST00000560496 GGA3Q9NZ52 723 aa13.02□□□□□ -0.33
SNRPA1-212ENST00000560496 ASTN2O75129 1339 aaPredicted RBP13.02□□□□□ -0.33
SNRPA1-212ENST00000560496 ZNF316A6NFI3 1004 aaPredicted RBP13.01□□□□□ -0.33
SNRPA1-212ENST00000560496 GRM1Q13255 1194 aa13.01□□□□□ -0.33
SNRPA1-212ENST00000560496 GCKRQ14397 625 aa13.01□□□□□ -0.33
SNRPA1-212ENST00000560496 FAM161AQ3B820 660 aa13.01□□□□□ -0.33
SNRPA1-212ENST00000560496 RSBN1LQ6PCB5 846 aaPredicted RBP13.01□□□□□ -0.33
SNRPA1-212ENST00000560496 GMLQ99445 158 aa13.01□□□□□ -0.33
SNRPA1-212ENST00000560496 BSDC1Q9NW68 430 aaPredicted RBP13.01□□□□□ -0.33
SNRPA1-212ENST00000560496 MINPP1Q9UNW1 487 aa13.01□□□□□ -0.33
SNRPA1-212ENST00000560496 ANP32CO43423 234 aa13□□□□□ -0.33
SNRPA1-212ENST00000560496 VAMP4O75379 141 aa13□□□□□ -0.33
SNRPA1-212ENST00000560496 ATP2B4P23634 1241 aa13□□□□□ -0.33
SNRPA1-212ENST00000560496 ZEB1P37275 1124 aaPredicted RBP13□□□□□ -0.33
SNRPA1-212ENST00000560496 ZNF280AP59817 542 aaPredicted RBP13□□□□□ -0.33
SNRPA1-212ENST00000560496 EXOSC9Q06265 439 aaKnown RBP13□□□□□ -0.33
SNRPA1-212ENST00000560496 FKBP5Q13451 457 aaPredicted RBP13□□□□□ -0.33
SNRPA1-212ENST00000560496 KRT26Q7Z3Y9 468 aa13□□□□□ -0.33
SNRPA1-212ENST00000560496 USP48Q86UV5 1035 aa13□□□□□ -0.33
SNRPA1-212ENST00000560496 WDR63Q8IWG1 891 aa13□□□□□ -0.33
SNRPA1-212ENST00000560496 DNAAF4Q8WXU2 420 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 167.3 ms