RNA–Protein interactions for RNA: ENST00000556821.5

PABPN1-207, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2 BASIC

Gene PABPN1, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-207ENST00000556821 MRPL50Q8N5N7 158 aaKnown RBP28.83■■■□□ 2.21
PABPN1-207ENST00000556821 PPIP5K2O43314 1243 aa28.82■■■□□ 2.2
PABPN1-207ENST00000556821 AOC3Q16853 763 aa28.82■■■□□ 2.2
PABPN1-207ENST00000556821 MAP1SQ66K74 1059 aaPredicted RBP28.82■■■□□ 2.2
PABPN1-207ENST00000556821 PNMA8AQ86V59 439 aaPredicted RBP28.82■■■□□ 2.2
PABPN1-207ENST00000556821 TTLL11Q8NHH1 800 aa28.82■■■□□ 2.2
PABPN1-207ENST00000556821 JDP2Q8WYK2 163 aa28.82■■■□□ 2.2
PABPN1-207ENST00000556821 RTL9Q8NET4 1388 aa28.81■■■□□ 2.2
PABPN1-207ENST00000556821 SUPT20HQ8NEM7 779 aa28.81■■■□□ 2.2
PABPN1-207ENST00000556821 SSH1Q8WYL5 1049 aa28.81■■■□□ 2.2
PABPN1-207ENST00000556821 PLA2G12BQ9BX93 195 aa28.8■■■□□ 2.2
PABPN1-207ENST00000556821 CLEC11AQ9Y240 323 aa28.8■■■□□ 2.2
PABPN1-207ENST00000556821 VPS33BQ9H267 617 aa28.79■■■□□ 2.2
PABPN1-207ENST00000556821 CCDC85CA6NKD9 419 aa28.78■■■□□ 2.2
PABPN1-207ENST00000556821 GPSM2P81274 684 aa28.78■■■□□ 2.2
PABPN1-207ENST00000556821 KIAA2012Q0VF49 1180 aa28.78■■■□□ 2.2
PABPN1-207ENST00000556821 GREM2Q9H772 168 aa28.78■■■□□ 2.2
PABPN1-207ENST00000556821 NIM1KQ8IY84 436 aa28.77■■■□□ 2.2
PABPN1-207ENST00000556821 BCL2L13Q9BXK5 485 aa28.77■■■□□ 2.2
PABPN1-207ENST00000556821 NSFL1CQ9UNZ2 370 aaKnown RBP28.77■■■□□ 2.2
PABPN1-207ENST00000556821 ZNF646O15015 1829 aaPredicted RBP28.77■■■□□ 2.2
PABPN1-207ENST00000556821 GPC2Q8N158 579 aa28.76■■■□□ 2.19
PABPN1-207ENST00000556821 POLLQ9UGP5 575 aa28.75■■■□□ 2.19
PABPN1-207ENST00000556821 EIF6P56537 245 aaKnown RBP28.74■■■□□ 2.19
PABPN1-207ENST00000556821 ALDH1L2Q3SY69 923 aa28.74■■■□□ 2.19
PABPN1-207ENST00000556821 SLC4A10Q6U841 1118 aa28.74■■■□□ 2.19
PABPN1-207ENST00000556821 ANKRD18AQ8IVF6 992 aa28.74■■■□□ 2.19
PABPN1-207ENST00000556821 ABT1Q9ULW3 272 aaKnown RBP28.74■■■□□ 2.19
PABPN1-207ENST00000556821 PTPRCP08575 1304 aa28.73■■■□□ 2.19
PABPN1-207ENST00000556821 ALDH1L1O75891 902 aa28.73■■■□□ 2.19
PABPN1-207ENST00000556821 CDC5LQ99459 802 aaKnown RBP28.73■■■□□ 2.19
PABPN1-207ENST00000556821 PODXL2Q9NZ53 605 aa28.73■■■□□ 2.19
PABPN1-207ENST00000556821 GRM8O00222 908 aa28.72■■■□□ 2.19
PABPN1-207ENST00000556821 CSF1RP07333 972 aa28.72■■■□□ 2.19
PABPN1-207ENST00000556821 CT47B1P0C2W7 299 aaPredicted RBP28.72■■■□□ 2.19
PABPN1-207ENST00000556821 CAPNS2Q96L46 248 aa28.72■■■□□ 2.19
PABPN1-207ENST00000556821 SRCIN1Q9C0H9 1055 aa28.72■■■□□ 2.19
PABPN1-207ENST00000556821 ZNRF3Q9ULT6 936 aa28.72■■■□□ 2.19
PABPN1-207ENST00000556821 FOXO4P98177 505 aa28.71■■■□□ 2.19
PABPN1-207ENST00000556821 TBC1D16Q8TBP0 767 aa28.71■■■□□ 2.19
PABPN1-207ENST00000556821 GPR101Q96P66 508 aaPredicted RBP28.7■■■□□ 2.18
PABPN1-207ENST00000556821 SMC4Q9NTJ3 1288 aa28.7■■■□□ 2.18
PABPN1-207ENST00000556821 GJA3Q9Y6H8 435 aa28.7■■■□□ 2.18
PABPN1-207ENST00000556821 YDJCA8MPS7 323 aa28.69■■■□□ 2.18
PABPN1-207ENST00000556821 C6orf229H3BNL8 230 aa28.69■■■□□ 2.18
PABPN1-207ENST00000556821 HNRNPUQ00839 825 aaKnown RBP eCLIP28.69■■■□□ 2.18
PABPN1-207ENST00000556821 FMR1Q06787 632 aaKnown RBP eCLIP28.69■■■□□ 2.18
PABPN1-207ENST00000556821 CXCL9Q07325 125 aa28.69■■■□□ 2.18
PABPN1-207ENST00000556821 CST9Q5W186 159 aa28.69■■■□□ 2.18
PABPN1-207ENST00000556821 ITGA6P23229 1130 aa28.68■■■□□ 2.18
PABPN1-207ENST00000556821 ECE1P42892 770 aa28.68■■■□□ 2.18
PABPN1-207ENST00000556821 SCNN1DP51172 638 aa28.68■■■□□ 2.18
PABPN1-207ENST00000556821 WASHC4Q2M389 1173 aa28.68■■■□□ 2.18
PABPN1-207ENST00000556821 EPHA10Q5JZY3 1008 aa28.68■■■□□ 2.18
PABPN1-207ENST00000556821 CYP4F22Q6NT55 531 aa28.67■■■□□ 2.18
PABPN1-207ENST00000556821 BSDC1Q9NW68 430 aaPredicted RBP28.67■■■□□ 2.18
PABPN1-207ENST00000556821 ANKIB1Q9P2G1 1089 aa28.67■■■□□ 2.18
PABPN1-207ENST00000556821 XDHP47989 1333 aa28.67■■■□□ 2.18
PABPN1-207ENST00000556821 RIMBP2O15034 1052 aa28.66■■■□□ 2.18
PABPN1-207ENST00000556821 UFL1O94874 794 aa28.66■■■□□ 2.18
PABPN1-207ENST00000556821 C9orf78Q9NZ63 289 aaPredicted RBP28.66■■■□□ 2.18
PABPN1-207ENST00000556821 UTYO14607 1347 aa28.66■■■□□ 2.18
PABPN1-207ENST00000556821 THSD7BQ9C0I4 1608 aa28.65■■■□□ 2.18
PABPN1-207ENST00000556821 MAP2K2P36507 400 aa28.65■■■□□ 2.18
PABPN1-207ENST00000556821 EYA3Q99504 573 aa28.65■■■□□ 2.18
PABPN1-207ENST00000556821 BEGAINQ9BUH8 593 aa28.65■■■□□ 2.18
PABPN1-207ENST00000556821 DBNDD1Q9H9R9 158 aa28.65■■■□□ 2.18
PABPN1-207ENST00000556821 GGA1Q9UJY5 639 aa28.65■■■□□ 2.18
PABPN1-207ENST00000556821 MINPP1Q9UNW1 487 aa28.65■■■□□ 2.18
PABPN1-207ENST00000556821 POLR2AP24928 1970 aaKnown RBP28.64■■■□□ 2.18
PABPN1-207ENST00000556821 NBPF7P0C2Y1 421 aaPredicted RBP28.64■■■□□ 2.18
PABPN1-207ENST00000556821 KAZALD1Q96I82 304 aa28.64■■■□□ 2.18
PABPN1-207ENST00000556821 TLL2Q9Y6L7 1015 aa28.64■■■□□ 2.18
PABPN1-207ENST00000556821 TRPM7Q96QT4 1865 aa28.63■■■□□ 2.17
PABPN1-207ENST00000556821 WTIPA6NIX2 430 aaPredicted RBP28.63■■■□□ 2.17
PABPN1-207ENST00000556821 RAD17O75943 681 aa28.63■■■□□ 2.17
PABPN1-207ENST00000556821 BRPF1P55201 1214 aaPredicted RBP28.63■■■□□ 2.17
PABPN1-207ENST00000556821 CIAPIN1Q6FI81 312 aa28.63■■■□□ 2.17
PABPN1-207ENST00000556821 IGHMBP2P38935 993 aaKnown RBP28.62■■■□□ 2.17
PABPN1-207ENST00000556821 RARSP54136 660 aaKnown RBP28.62■■■□□ 2.17
PABPN1-207ENST00000556821 LMBR1LQ6UX01 489 aa28.62■■■□□ 2.17
PABPN1-207ENST00000556821 SUCLG2Q96I99 432 aa28.62■■■□□ 2.17
PABPN1-207ENST00000556821 MCOLN1Q9GZU1 580 aa28.62■■■□□ 2.17
PABPN1-207ENST00000556821 ECE2O60344 883 aa28.61■■■□□ 2.17
PABPN1-207ENST00000556821 EPS15P42566 896 aa28.61■■■□□ 2.17
PABPN1-207ENST00000556821 DOK7Q18PE1 504 aa28.61■■■□□ 2.17
PABPN1-207ENST00000556821 TSKSQ9UJT2 592 aa28.61■■■□□ 2.17
PABPN1-207ENST00000556821 ANKRD18BA2A2Z9 1011 aa28.6■■■□□ 2.17
PABPN1-207ENST00000556821 ZC3H12CQ9C0D7 883 aaKnown RBP28.6■■■□□ 2.17
PABPN1-207ENST00000556821 GPRC5DQ9NZD1 345 aa28.6■■■□□ 2.17
PABPN1-207ENST00000556821 ATP2B4P23634 1241 aa28.59■■■□□ 2.17
PABPN1-207ENST00000556821 LMOD1P29536 600 aaPredicted RBP28.59■■■□□ 2.17
PABPN1-207ENST00000556821 NOB1Q9ULX3 412 aaKnown RBP28.59■■■□□ 2.17
PABPN1-207ENST00000556821 CHMP3Q9Y3E7 222 aa28.59■■■□□ 2.17
PABPN1-207ENST00000556821 TRAF5O00463 557 aa28.58■■■□□ 2.17
PABPN1-207ENST00000556821 AOC2O75106 756 aa28.58■■■□□ 2.17
PABPN1-207ENST00000556821 GMPSP49915 693 aaPredicted RBP28.58■■■□□ 2.17
PABPN1-207ENST00000556821 CCT4P50991 539 aaKnown RBP28.58■■■□□ 2.17
PABPN1-207ENST00000556821 IFIT5Q13325 482 aaKnown RBP28.58■■■□□ 2.17
PABPN1-207ENST00000556821 MPHOSPH8Q99549 860 aa28.58■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms