RNA–Protein interactions for RNA: ENST00000556217.5

SUPT16H-205, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 1,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-205ENST00000556217 POLLQ9UGP5 575 aa20.05■□□□□ 0.8
SUPT16H-205ENST00000556217 RPS8P62241 208 aaKnown RBP20.04■□□□□ 0.8
SUPT16H-205ENST00000556217 TBC1D10BQ4KMP7 808 aaPredicted RBP20.04■□□□□ 0.8
SUPT16H-205ENST00000556217 DUSP27Q5VZP5 1158 aa20.04■□□□□ 0.8
SUPT16H-205ENST00000556217 GOLGA2Q08379 1002 aa20.03■□□□□ 0.8
SUPT16H-205ENST00000556217 DOK7Q18PE1 504 aa20.03■□□□□ 0.8
SUPT16H-205ENST00000556217 RIC3Q7Z5B4 369 aa20.03■□□□□ 0.8
SUPT16H-205ENST00000556217 C2orf69Q8N8R5 385 aa20.03■□□□□ 0.8
SUPT16H-205ENST00000556217 TBC1D16Q8TBP0 767 aa20.03■□□□□ 0.8
SUPT16H-205ENST00000556217 ZIC5Q96T25 663 aa20.03■□□□□ 0.8
SUPT16H-205ENST00000556217 ZC3H12CQ9C0D7 883 aaKnown RBP20.03■□□□□ 0.8
SUPT16H-205ENST00000556217 SAGE1Q9NXZ1 904 aa20.03■□□□□ 0.8
SUPT16H-205ENST00000556217 G3V3G9 751 aa20.02■□□□□ 0.8
SUPT16H-205ENST00000556217 RBM26Q5T8P6 1007 aaKnown RBP20.02■□□□□ 0.8
SUPT16H-205ENST00000556217 DCAF8Q5TAQ9 597 aa20.02■□□□□ 0.8
SUPT16H-205ENST00000556217 ZBTB38Q8NAP3 1195 aaPredicted RBP20.02■□□□□ 0.8
SUPT16H-205ENST00000556217 GBA2Q9HCG7 927 aaPredicted RBP20.02■□□□□ 0.8
SUPT16H-205ENST00000556217 RTL9Q8NET4 1388 aa20.01■□□□□ 0.79
SUPT16H-205ENST00000556217 RGMBQ6NW40 437 aa20.01■□□□□ 0.79
SUPT16H-205ENST00000556217 CCDC102AQ96A19 550 aa20.01■□□□□ 0.79
SUPT16H-205ENST00000556217 PODXL2Q9NZ53 605 aa20.01■□□□□ 0.79
SUPT16H-205ENST00000556217 ANKIB1Q9P2G1 1089 aa20.01■□□□□ 0.79
SUPT16H-205ENST00000556217 ADAMTS8Q9UP79 889 aa20.01■□□□□ 0.79
SUPT16H-205ENST00000556217 COL4A1P02462 1669 aa20■□□□□ 0.79
SUPT16H-205ENST00000556217 DDX10Q13206 875 aaKnown RBP20■□□□□ 0.79
SUPT16H-205ENST00000556217 KIF4BQ2VIQ3 1234 aa20■□□□□ 0.79
SUPT16H-205ENST00000556217 KCNQ5Q9NR82 932 aa20■□□□□ 0.79
SUPT16H-205ENST00000556217 MBIPQ9NS73 344 aa20■□□□□ 0.79
SUPT16H-205ENST00000556217 SCN9AQ15858 1988 aa20■□□□□ 0.79
SUPT16H-205ENST00000556217 UFL1O94874 794 aa19.99■□□□□ 0.79
SUPT16H-205ENST00000556217 EGFRP00533 1210 aa19.99■□□□□ 0.79
SUPT16H-205ENST00000556217 VIL1P09327 827 aaKnown RBP19.99■□□□□ 0.79
SUPT16H-205ENST00000556217 CALD1Q05682 793 aaKnown RBP19.99■□□□□ 0.79
SUPT16H-205ENST00000556217 CCDC152Q4G0S7 254 aa19.99■□□□□ 0.79
SUPT16H-205ENST00000556217 SULF1Q8IWU6 871 aa19.99■□□□□ 0.79
SUPT16H-205ENST00000556217 GGA1Q9UJY5 639 aa19.99■□□□□ 0.79
SUPT16H-205ENST00000556217 AKAP11Q9UKA4 1901 aa19.99■□□□□ 0.79
SUPT16H-205ENST00000556217 ADM5C9JUS6 153 aa19.98■□□□□ 0.79
SUPT16H-205ENST00000556217 DLK2Q6UY11 383 aa19.98■□□□□ 0.79
SUPT16H-205ENST00000556217 CCDC191Q8NCU4 936 aa19.98■□□□□ 0.79
SUPT16H-205ENST00000556217 CHMP4AQ9BY43 222 aa19.98■□□□□ 0.79
SUPT16H-205ENST00000556217 ZNF157P51786 506 aaPredicted RBP19.97■□□□□ 0.79
SUPT16H-205ENST00000556217 MYD88Q99836 296 aa19.97■□□□□ 0.79
SUPT16H-205ENST00000556217 SEC31BQ9NQW1 1179 aa19.97■□□□□ 0.79
SUPT16H-205ENST00000556217 IFT57Q9NWB7 429 aa19.97■□□□□ 0.79
SUPT16H-205ENST00000556217 GGA3Q9NZ52 723 aa19.97■□□□□ 0.79
SUPT16H-205ENST00000556217 PSME4Q14997 1843 aa19.97■□□□□ 0.79
SUPT16H-205ENST00000556217 FAM155AB1AL88 458 aaPredicted RBP19.96■□□□□ 0.79
SUPT16H-205ENST00000556217 TRPA1O75762 1119 aa19.96■□□□□ 0.79
SUPT16H-205ENST00000556217 PCCAP05165 728 aaPredicted RBP19.96■□□□□ 0.79
SUPT16H-205ENST00000556217 ZNF853P0CG23 659 aa19.96■□□□□ 0.79
SUPT16H-205ENST00000556217 GNAI1P63096 354 aa19.96■□□□□ 0.79
SUPT16H-205ENST00000556217 KIF23Q02241 960 aaPredicted RBP19.96■□□□□ 0.79
SUPT16H-205ENST00000556217 RNF186Q9NXI6 227 aa19.96■□□□□ 0.79
SUPT16H-205ENST00000556217 ZNF609O15014 1411 aa19.95■□□□□ 0.78
SUPT16H-205ENST00000556217 PDE8AO60658 829 aa19.95■□□□□ 0.78
SUPT16H-205ENST00000556217 DDX58O95786 925 aaKnown RBP19.95■□□□□ 0.78
SUPT16H-205ENST00000556217 CTU1Q7Z7A3 348 aaKnown RBP19.95■□□□□ 0.78
SUPT16H-205ENST00000556217 AGBL3Q8NEM8 1001 aa19.95■□□□□ 0.78
SUPT16H-205ENST00000556217 PHAXQ9H814 394 aaKnown RBP19.95■□□□□ 0.78
SUPT16H-205ENST00000556217 CWC25Q9NXE8 425 aaPredicted RBP19.95■□□□□ 0.78
SUPT16H-205ENST00000556217 ZNF280AP59817 542 aaPredicted RBP19.94■□□□□ 0.78
SUPT16H-205ENST00000556217 RSBN1LQ6PCB5 846 aaPredicted RBP19.94■□□□□ 0.78
SUPT16H-205ENST00000556217 XDHP47989 1333 aa19.94■□□□□ 0.78
SUPT16H-205ENST00000556217 ELL2O00472 640 aaPredicted RBP19.93■□□□□ 0.78
SUPT16H-205ENST00000556217 ANKRD18AQ8IVF6 992 aa19.93■□□□□ 0.78
SUPT16H-205ENST00000556217 CDCA5Q96FF9 252 aa19.93■□□□□ 0.78
SUPT16H-205ENST00000556217 SLC10A3P09131 477 aa19.92■□□□□ 0.78
SUPT16H-205ENST00000556217 SCARF1Q14162 830 aa19.92■□□□□ 0.78
SUPT16H-205ENST00000556217 REM2Q8IYK8 340 aaPredicted RBP19.92■□□□□ 0.78
SUPT16H-205ENST00000556217 METTL22Q9BUU2 404 aaPredicted RBP19.92■□□□□ 0.78
SUPT16H-205ENST00000556217 MYH3P11055 1940 aa19.92■□□□□ 0.78
SUPT16H-205ENST00000556217 APAF1O14727 1248 aa19.91■□□□□ 0.78
SUPT16H-205ENST00000556217 USP17L8P0C7I0 530 aa19.91■□□□□ 0.78
SUPT16H-205ENST00000556217 ATP2B4P23634 1241 aa19.91■□□□□ 0.78
SUPT16H-205ENST00000556217 FKBP1BP68106 108 aa19.91■□□□□ 0.78
SUPT16H-205ENST00000556217 ANGEL2Q5VTE6 544 aaKnown RBP19.91■□□□□ 0.78
SUPT16H-205ENST00000556217 CCDC30Q5VVM6 783 aa19.91■□□□□ 0.78
SUPT16H-205ENST00000556217 GCC1Q96CN9 775 aa19.91■□□□□ 0.78
SUPT16H-205ENST00000556217 CCDC85AQ96PX6 553 aaPredicted RBP19.91■□□□□ 0.78
SUPT16H-205ENST00000556217 CDC5LQ99459 802 aaKnown RBP19.91■□□□□ 0.78
SUPT16H-205ENST00000556217 USP17L3A6NCW0 530 aa19.9■□□□□ 0.78
SUPT16H-205ENST00000556217 USP17L4A6NCW7 530 aa19.9■□□□□ 0.78
SUPT16H-205ENST00000556217 USP17L1Q7RTZ2 530 aa19.9■□□□□ 0.78
SUPT16H-205ENST00000556217 PODNQ7Z5L7 613 aa19.9■□□□□ 0.78
SUPT16H-205ENST00000556217 MYOZ2Q9NPC6 264 aa19.9■□□□□ 0.78
SUPT16H-205ENST00000556217 ASTN2O75129 1339 aaPredicted RBP19.9■□□□□ 0.78
SUPT16H-205ENST00000556217 PITPNM2Q9BZ72 1349 aa19.9■□□□□ 0.78
SUPT16H-205ENST00000556217 PKN2Q16513 984 aaKnown RBP19.89■□□□□ 0.77
SUPT16H-205ENST00000556217 JARID2Q92833 1246 aaPredicted RBP19.89■□□□□ 0.77
SUPT16H-205ENST00000556217 CSRNP1Q96S65 589 aa19.89■□□□□ 0.77
SUPT16H-205ENST00000556217 PAPPA2Q9BXP8 1791 aa19.89■□□□□ 0.77
SUPT16H-205ENST00000556217 HPS5Q9UPZ3 1129 aa19.89■□□□□ 0.77
SUPT16H-205ENST00000556217 CTSWP56202 376 aa19.88■□□□□ 0.77
SUPT16H-205ENST00000556217 C8orf58Q8NAV2 365 aa19.88■□□□□ 0.77
SUPT16H-205ENST00000556217 GMLQ99445 158 aa19.88■□□□□ 0.77
SUPT16H-205ENST00000556217 PRKRIP1Q9H875 184 aaPredicted RBP19.88■□□□□ 0.77
SUPT16H-205ENST00000556217 MAP3K2Q9Y2U5 619 aa19.88■□□□□ 0.77
SUPT16H-205ENST00000556217 SPEF2Q9C093 1822 aa19.88■□□□□ 0.77
SUPT16H-205ENST00000556217 NEXNQ0ZGT2 675 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms