RNA–Protein interactions for RNA: ENST00000555906.5

PRKCH-219, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-219ENST00000555906 CTCFP49711 727 aaPredicted RBP25.36■■□□□ 1.65
PRKCH-219ENST00000555906 HIRAP54198 1017 aaPredicted RBP25.36■■□□□ 1.65
PRKCH-219ENST00000555906 TWISTNBQ3B726 338 aaPredicted RBP25.36■■□□□ 1.65
PRKCH-219ENST00000555906 PRDM10Q9NQV6 1147 aa25.36■■□□□ 1.65
PRKCH-219ENST00000555906 ZNF609O15014 1411 aa25.36■■□□□ 1.65
PRKCH-219ENST00000555906 SHTN1A0MZ66 631 aa25.35■■□□□ 1.65
PRKCH-219ENST00000555906 PI4KAP2A4QPH2 592 aa25.35■■□□□ 1.65
PRKCH-219ENST00000555906 RPS12P25398 132 aaKnown RBP25.35■■□□□ 1.65
PRKCH-219ENST00000555906 ECE1P42892 770 aa25.35■■□□□ 1.65
PRKCH-219ENST00000555906 PI4KAP1Q8N8J0 262 aa25.35■■□□□ 1.65
PRKCH-219ENST00000555906 GLIS2Q9BZE0 524 aaPredicted RBP25.35■■□□□ 1.65
PRKCH-219ENST00000555906 ZBTB12Q9Y330 459 aaPredicted RBP25.35■■□□□ 1.65
PRKCH-219ENST00000555906 UFL1O94874 794 aa25.34■■□□□ 1.65
PRKCH-219ENST00000555906 IGKV5-2P06315 115 aa25.34■■□□□ 1.65
PRKCH-219ENST00000555906 CTSWP56202 376 aa25.34■■□□□ 1.65
PRKCH-219ENST00000555906 MAP2K1Q02750 393 aaPredicted RBP25.34■■□□□ 1.65
PRKCH-219ENST00000555906 NEXNQ0ZGT2 675 aa25.34■■□□□ 1.65
PRKCH-219ENST00000555906 CAPNS2Q96L46 248 aa25.34■■□□□ 1.65
PRKCH-219ENST00000555906 GPR101Q96P66 508 aaPredicted RBP25.34■■□□□ 1.65
PRKCH-219ENST00000555906 MRS2Q9HD23 443 aa25.34■■□□□ 1.65
PRKCH-219ENST00000555906 GGA1Q9UJY5 639 aa25.34■■□□□ 1.65
PRKCH-219ENST00000555906 JARID2Q92833 1246 aaPredicted RBP25.33■■□□□ 1.65
PRKCH-219ENST00000555906 ZC3H12CQ9C0D7 883 aaKnown RBP25.33■■□□□ 1.65
PRKCH-219ENST00000555906 ANKIB1Q9P2G1 1089 aa25.33■■□□□ 1.65
PRKCH-219ENST00000555906 CELF2O95319 508 aaKnown RBP25.32■■□□□ 1.64
PRKCH-219ENST00000555906 DOK7Q18PE1 504 aa25.32■■□□□ 1.64
PRKCH-219ENST00000555906 PAXIP1Q6ZW49 1069 aaPredicted RBP25.32■■□□□ 1.64
PRKCH-219ENST00000555906 CDC37L1Q7L3B6 337 aa25.32■■□□□ 1.64
PRKCH-219ENST00000555906 ANKRD18AQ8IVF6 992 aa25.32■■□□□ 1.64
PRKCH-219ENST00000555906 CCDC85AQ96PX6 553 aaPredicted RBP25.32■■□□□ 1.64
PRKCH-219ENST00000555906 POLR2AP24928 1970 aaKnown RBP25.32■■□□□ 1.64
PRKCH-219ENST00000555906 XDHP47989 1333 aa25.32■■□□□ 1.64
PRKCH-219ENST00000555906 FANCIQ9NVI1 1328 aa25.32■■□□□ 1.64
PRKCH-219ENST00000555906 ZNF646O15015 1829 aaPredicted RBP25.31■■□□□ 1.64
PRKCH-219ENST00000555906 CDC5LQ99459 802 aaKnown RBP25.31■■□□□ 1.64
PRKCH-219ENST00000555906 NEURL1BA8MQ27 555 aa25.3■■□□□ 1.64
PRKCH-219ENST00000555906 ANP32CO43423 234 aa25.3■■□□□ 1.64
PRKCH-219ENST00000555906 CYP4F22Q6NT55 531 aa25.3■■□□□ 1.64
PRKCH-219ENST00000555906 SAPCD2Q86UD0 394 aa25.3■■□□□ 1.64
PRKCH-219ENST00000555906 HHIPL1Q96JK4 782 aa25.3■■□□□ 1.64
PRKCH-219ENST00000555906 CWF19L2Q2TBE0 894 aaKnown RBP25.29■■□□□ 1.64
PRKCH-219ENST00000555906 G2E3Q7L622 706 aa25.29■■□□□ 1.64
PRKCH-219ENST00000555906 SAMD7Q7Z3H4 446 aa25.29■■□□□ 1.64
PRKCH-219ENST00000555906 KCNQ5Q9NR82 932 aa25.29■■□□□ 1.64
PRKCH-219ENST00000555906 CAPN15O75808 1086 aa25.28■■□□□ 1.64
PRKCH-219ENST00000555906 SLC4A2P04920 1241 aa25.28■■□□□ 1.64
PRKCH-219ENST00000555906 VIL1P09327 827 aaKnown RBP25.28■■□□□ 1.64
PRKCH-219ENST00000555906 TTLL11Q8NHH1 800 aa25.28■■□□□ 1.64
PRKCH-219ENST00000555906 HSPA8P11142 646 aaKnown RBP25.27■■□□□ 1.64
PRKCH-219ENST00000555906 FLIIQ13045 1269 aa25.27■■□□□ 1.64
PRKCH-219ENST00000555906 TBC1D10BQ4KMP7 808 aaPredicted RBP25.27■■□□□ 1.64
PRKCH-219ENST00000555906 G3V3G9 751 aa25.26■■□□□ 1.63
PRKCH-219ENST00000555906 EGFRP00533 1210 aa25.26■■□□□ 1.63
PRKCH-219ENST00000555906 ATP2B4P23634 1241 aa25.26■■□□□ 1.63
PRKCH-219ENST00000555906 LBX1P52954 281 aa25.26■■□□□ 1.63
PRKCH-219ENST00000555906 DCAF8Q5TAQ9 597 aa25.26■■□□□ 1.63
PRKCH-219ENST00000555906 WDR63Q8IWG1 891 aa25.26■■□□□ 1.63
PRKCH-219ENST00000555906 GREM2Q9H772 168 aa25.26■■□□□ 1.63
PRKCH-219ENST00000555906 ZNF408Q9H9D4 720 aa25.26■■□□□ 1.63
PRKCH-219ENST00000555906 MED23Q9ULK4 1368 aa25.26■■□□□ 1.63
PRKCH-219ENST00000555906 ZNF316A6NFI3 1004 aaPredicted RBP25.25■■□□□ 1.63
PRKCH-219ENST00000555906 GRM1Q13255 1194 aa25.25■■□□□ 1.63
PRKCH-219ENST00000555906 KIF4BQ2VIQ3 1234 aa25.25■■□□□ 1.63
PRKCH-219ENST00000555906 UBE3BQ7Z3V4 1068 aa25.25■■□□□ 1.63
PRKCH-219ENST00000555906 BSDC1Q9NW68 430 aaPredicted RBP25.25■■□□□ 1.63
PRKCH-219ENST00000555906 A0A1B0GUL6 1792 aa25.25■■□□□ 1.63
PRKCH-219ENST00000555906 H7C1W4 665 aa25.24■■□□□ 1.63
PRKCH-219ENST00000555906 MAP2K2P36507 400 aa25.24■■□□□ 1.63
PRKCH-219ENST00000555906 PLA2G12BQ9BX93 195 aa25.24■■□□□ 1.63
PRKCH-219ENST00000555906 FKBP5Q13451 457 aaPredicted RBP25.23■■□□□ 1.63
PRKCH-219ENST00000555906 KRT26Q7Z3Y9 468 aa25.23■■□□□ 1.63
PRKCH-219ENST00000555906 USP48Q86UV5 1035 aa25.23■■□□□ 1.63
PRKCH-219ENST00000555906 AGBL3Q8NEM8 1001 aa25.23■■□□□ 1.63
PRKCH-219ENST00000555906 GCKRQ14397 625 aa25.22■■□□□ 1.63
PRKCH-219ENST00000555906 RSBN1LQ6PCB5 846 aaPredicted RBP25.22■■□□□ 1.63
PRKCH-219ENST00000555906 DNAAF4Q8WXU2 420 aa25.22■■□□□ 1.63
PRKCH-219ENST00000555906 BEGAINQ9BUH8 593 aa25.22■■□□□ 1.63
PRKCH-219ENST00000555906 MYH16Q9H6N6 1097 aa25.22■■□□□ 1.63
PRKCH-219ENST00000555906 MINPP1Q9UNW1 487 aa25.22■■□□□ 1.63
PRKCH-219ENST00000555906 ZNF280AP59817 542 aaPredicted RBP25.21■■□□□ 1.63
PRKCH-219ENST00000555906 PODNQ7Z5L7 613 aa25.21■■□□□ 1.63
PRKCH-219ENST00000555906 LINS1Q8NG48 757 aa25.21■■□□□ 1.63
PRKCH-219ENST00000555906 DCPSQ96C86 337 aaKnown RBP25.21■■□□□ 1.63
PRKCH-219ENST00000555906 AOC2O75106 756 aa25.2■■□□□ 1.62
PRKCH-219ENST00000555906 VAMP4O75379 141 aa25.2■■□□□ 1.62
PRKCH-219ENST00000555906 CASP7P55210 303 aa25.2■■□□□ 1.62
PRKCH-219ENST00000555906 RBM26Q5T8P6 1007 aaKnown RBP25.2■■□□□ 1.62
PRKCH-219ENST00000555906 GGA3Q9NZ52 723 aa25.2■■□□□ 1.62
PRKCH-219ENST00000555906 ADM5C9JUS6 153 aa25.19■■□□□ 1.62
PRKCH-219ENST00000555906 IGHMBP2P38935 993 aaKnown RBP25.19■■□□□ 1.62
PRKCH-219ENST00000555906 USP17L3A6NCW0 530 aa25.18■■□□□ 1.62
PRKCH-219ENST00000555906 USP17L4A6NCW7 530 aa25.18■■□□□ 1.62
PRKCH-219ENST00000555906 CCT4P50991 539 aaKnown RBP25.18■■□□□ 1.62
PRKCH-219ENST00000555906 BRPF1P55201 1214 aaPredicted RBP25.18■■□□□ 1.62
PRKCH-219ENST00000555906 EXOSC9Q06265 439 aaKnown RBP25.18■■□□□ 1.62
PRKCH-219ENST00000555906 FAM161AQ3B820 660 aa25.18■■□□□ 1.62
PRKCH-219ENST00000555906 USP17L1Q7RTZ2 530 aa25.18■■□□□ 1.62
PRKCH-219ENST00000555906 GMLQ99445 158 aa25.18■■□□□ 1.62
PRKCH-219ENST00000555906 CA12O43570 354 aa25.17■■□□□ 1.62
PRKCH-219ENST00000555906 ITGA6P23229 1130 aa25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms