RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 GPSM2P81274 684 aa17.25■□□□□ 0.35
TUBB3-202ENST00000553656 SLC51AQ86UW1 340 aa17.25■□□□□ 0.35
TUBB3-202ENST00000553656 ZNF277Q9NRM2 450 aaPredicted RBP17.25■□□□□ 0.35
TUBB3-202ENST00000553656 GGA1Q9UJY5 639 aa17.25■□□□□ 0.35
TUBB3-202ENST00000553656 MINPP1Q9UNW1 487 aa17.25■□□□□ 0.35
TUBB3-202ENST00000553656 SNED1Q8TER0 1413 aa17.24■□□□□ 0.35
TUBB3-202ENST00000553656 UFL1O94874 794 aa17.24■□□□□ 0.35
TUBB3-202ENST00000553656 KCNJ4P48050 445 aa17.24■□□□□ 0.35
TUBB3-202ENST00000553656 MTX1Q13505 466 aa17.24■□□□□ 0.35
TUBB3-202ENST00000553656 C9orf131Q5VYM1 1079 aa17.24■□□□□ 0.35
TUBB3-202ENST00000553656 EYA3Q99504 573 aa17.24■□□□□ 0.35
TUBB3-202ENST00000553656 GOLGB1Q14789 3259 aaKnown RBP17.23■□□□□ 0.35
TUBB3-202ENST00000553656 CHD4Q14839 1912 aa17.23■□□□□ 0.35
TUBB3-202ENST00000553656 ATP2B4P23634 1241 aa17.23■□□□□ 0.35
TUBB3-202ENST00000553656 IARSP41252 1262 aaKnown RBP17.23■□□□□ 0.35
TUBB3-202ENST00000553656 CHRNDQ07001 517 aa17.23■□□□□ 0.35
TUBB3-202ENST00000553656 RTFDC1Q9BY42 306 aaPredicted RBP17.23■□□□□ 0.35
TUBB3-202ENST00000553656 ZBTB40Q9NUA8 1239 aa17.23■□□□□ 0.35
TUBB3-202ENST00000553656 PODXL2Q9NZ53 605 aa17.23■□□□□ 0.35
TUBB3-202ENST00000553656 PPIP5K2O43314 1243 aa17.22■□□□□ 0.35
TUBB3-202ENST00000553656 LARGE2Q8N3Y3 721 aa17.22■□□□□ 0.35
TUBB3-202ENST00000553656 KLHDC4Q8TBB5 520 aa17.22■□□□□ 0.35
TUBB3-202ENST00000553656 TBC1D16Q8TBP0 767 aa17.22■□□□□ 0.35
TUBB3-202ENST00000553656 VPS33BQ9H267 617 aa17.22■□□□□ 0.35
TUBB3-202ENST00000553656 MROH5Q6ZUA9 1318 aa17.21■□□□□ 0.35
TUBB3-202ENST00000553656 CENPBP07199 599 aaPredicted RBP17.21■□□□□ 0.35
TUBB3-202ENST00000553656 RFX5P48382 616 aaPredicted RBP17.21■□□□□ 0.35
TUBB3-202ENST00000553656 ATP8B2P98198 1209 aa17.21■□□□□ 0.35
TUBB3-202ENST00000553656 PTPN12Q05209 780 aaKnown RBP17.21■□□□□ 0.35
TUBB3-202ENST00000553656 WASHC4Q2M389 1173 aa17.21■□□□□ 0.35
TUBB3-202ENST00000553656 METTL24Q5JXM2 366 aa17.21■□□□□ 0.35
TUBB3-202ENST00000553656 JDP2Q8WYK2 163 aa17.21■□□□□ 0.35
TUBB3-202ENST00000553656 SIL1Q9H173 461 aa17.21■□□□□ 0.35
TUBB3-202ENST00000553656 FBXO3Q9UK99 471 aa17.21■□□□□ 0.35
TUBB3-202ENST00000553656 LEMD3Q9Y2U8 911 aa17.21■□□□□ 0.35
TUBB3-202ENST00000553656 PNMA6EA0A0J9YXQ4 647 aa17.2■□□□□ 0.34
TUBB3-202ENST00000553656 G3V3G9 751 aa17.2■□□□□ 0.34
TUBB3-202ENST00000553656 EYA2O00167 538 aa17.2■□□□□ 0.34
TUBB3-202ENST00000553656 CIAO1O76071 339 aa17.2■□□□□ 0.34
TUBB3-202ENST00000553656 AOC3Q16853 763 aa17.2■□□□□ 0.34
TUBB3-202ENST00000553656 DCAF8Q5TAQ9 597 aa17.2■□□□□ 0.34
TUBB3-202ENST00000553656 CEP85Q6P2H3 762 aa17.2■□□□□ 0.34
TUBB3-202ENST00000553656 NIM1KQ8IY84 436 aa17.2■□□□□ 0.34
TUBB3-202ENST00000553656 CRBNQ96SW2 442 aa17.2■□□□□ 0.34
TUBB3-202ENST00000553656 PUS3Q9BZE2 481 aaKnown RBP17.2■□□□□ 0.34
TUBB3-202ENST00000553656 ZC3H12CQ9C0D7 883 aaKnown RBP17.2■□□□□ 0.34
TUBB3-202ENST00000553656 COPRSQ9NQ92 184 aa17.2■□□□□ 0.34
TUBB3-202ENST00000553656 POLLQ9UGP5 575 aa17.2■□□□□ 0.34
TUBB3-202ENST00000553656 ZC3H4Q9UPT8 1303 aaKnown RBP17.2■□□□□ 0.34
TUBB3-202ENST00000553656 DUOX1Q9NRD9 1551 aa17.19■□□□□ 0.34
TUBB3-202ENST00000553656 LTBP1Q14766 1721 aa17.19■□□□□ 0.34
TUBB3-202ENST00000553656 SBF1O95248 1867 aa17.19■□□□□ 0.34
TUBB3-202ENST00000553656 HMMRO75330 724 aa17.19■□□□□ 0.34
TUBB3-202ENST00000553656 PRELPP51888 382 aa17.19■□□□□ 0.34
TUBB3-202ENST00000553656 KIAA2012Q0VF49 1180 aa17.19■□□□□ 0.34
TUBB3-202ENST00000553656 LRRC24Q50LG9 513 aa17.19■□□□□ 0.34
TUBB3-202ENST00000553656 RPAP2Q8IXW5 612 aaPredicted RBP17.19■□□□□ 0.34
TUBB3-202ENST00000553656 HELBQ8NG08 1087 aaPredicted RBP17.19■□□□□ 0.34
TUBB3-202ENST00000553656 PA2G4Q9UQ80 394 aaKnown RBP17.19■□□□□ 0.34
TUBB3-202ENST00000553656 RIPOR2Q9Y4F9 1068 aa17.19■□□□□ 0.34
TUBB3-202ENST00000553656 ZNF804BA4D1E1 1349 aa17.19■□□□□ 0.34
TUBB3-202ENST00000553656 RIMBP2O15034 1052 aa17.18■□□□□ 0.34
TUBB3-202ENST00000553656 TAF5LO75529 589 aa17.18■□□□□ 0.34
TUBB3-202ENST00000553656 YY1P25490 414 aa17.18■□□□□ 0.34
TUBB3-202ENST00000553656 IL15P40933 162 aaPredicted RBP17.18■□□□□ 0.34
TUBB3-202ENST00000553656 OS9Q13438 667 aaPredicted RBP17.18■□□□□ 0.34
TUBB3-202ENST00000553656 SSH3Q8TE77 659 aa17.18■□□□□ 0.34
TUBB3-202ENST00000553656 CCDC88AQ3V6T2 1871 aa17.18■□□□□ 0.34
TUBB3-202ENST00000553656 G3BP1Q13283 466 aaKnown RBP eCLIP17.17■□□□□ 0.341e-8■□□□□ 8.1
TUBB3-202ENST00000553656 POLA2Q14181 598 aa17.17■□□□□ 0.34
TUBB3-202ENST00000553656 TIAM2Q8IVF5 1701 aa17.17■□□□□ 0.34
TUBB3-202ENST00000553656 GPR101Q96P66 508 aaPredicted RBP17.17■□□□□ 0.34
TUBB3-202ENST00000553656 CEP126Q9P2H0 1117 aa17.17■□□□□ 0.34
TUBB3-202ENST00000553656 MED23Q9ULK4 1368 aa17.16■□□□□ 0.34
TUBB3-202ENST00000553656 DICER1Q9UPY3 1922 aaKnown RBP17.15■□□□□ 0.34
TUBB3-202ENST00000553656 SURF6O75683 361 aaKnown RBP17.15■□□□□ 0.34
TUBB3-202ENST00000553656 PDE8BO95263 885 aa17.15■□□□□ 0.34
TUBB3-202ENST00000553656 EIF6P56537 245 aaKnown RBP17.15■□□□□ 0.34
TUBB3-202ENST00000553656 AAMPQ13685 434 aa17.15■□□□□ 0.34
TUBB3-202ENST00000553656 UBE4AQ14139 1066 aa17.15■□□□□ 0.34
TUBB3-202ENST00000553656 PUM3Q15397 648 aaKnown RBP17.15■□□□□ 0.34
TUBB3-202ENST00000553656 A0A1B0GUL6 1792 aa17.15■□□□□ 0.34
TUBB3-202ENST00000553656 DPY19L2Q6NUT2 758 aa17.14■□□□□ 0.33
TUBB3-202ENST00000553656 ATG9AQ7Z3C6 839 aa17.14■□□□□ 0.33
TUBB3-202ENST00000553656 ZNRF3Q9ULT6 936 aa17.14■□□□□ 0.33
TUBB3-202ENST00000553656 UTRNP46939 3433 aa17.14■□□□□ 0.33
TUBB3-202ENST00000553656 IFIT1P09914 478 aaKnown RBP17.13■□□□□ 0.33
TUBB3-202ENST00000553656 DOK7Q18PE1 504 aa17.13■□□□□ 0.33
TUBB3-202ENST00000553656 HSP90AB4PQ58FF6 505 aa17.13■□□□□ 0.33
TUBB3-202ENST00000553656 VGLL2Q8N8G2 317 aa17.13■□□□□ 0.33
TUBB3-202ENST00000553656 DBNDD1Q9H9R9 158 aa17.13■□□□□ 0.33
TUBB3-202ENST00000553656 FZD9O00144 591 aa17.12■□□□□ 0.33
TUBB3-202ENST00000553656 SNAP23O00161 211 aa17.12■□□□□ 0.33
TUBB3-202ENST00000553656 ECE2O60344 883 aa17.12■□□□□ 0.33
TUBB3-202ENST00000553656 SLC5A1P13866 664 aa17.12■□□□□ 0.33
TUBB3-202ENST00000553656 ZNF804AQ7Z570 1209 aa17.12■□□□□ 0.33
TUBB3-202ENST00000553656 ERC1Q8IUD2 1116 aa17.12■□□□□ 0.33
TUBB3-202ENST00000553656 COA1Q9GZY4 146 aa17.12■□□□□ 0.33
TUBB3-202ENST00000553656 AKAP2Q9Y2D5 859 aa17.12■□□□□ 0.33
TUBB3-202ENST00000553656 KDM2BQ8NHM5 1336 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms