RNA–Protein interactions for RNA: ENST00000544455.5

BRCA2-206, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA2, Length 10,984 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-206ENST00000544455 ANP32BQ92688 251 aaKnown RBP4.48□□□□□ -1.69
BRCA2-206ENST00000544455 CHMP4AQ9BY43 222 aa4.48□□□□□ -1.69
BRCA2-206ENST00000544455 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.48□□□□□ -1.69
BRCA2-206ENST00000544455 IDH1O75874 414 aaKnown RBP4.48□□□□□ -1.69
BRCA2-206ENST00000544455 KIF6Q6ZMV9 814 aa4.48□□□□□ -1.69
BRCA2-206ENST00000544455 PSMA5P28066 241 aa4.48□□□□□ -1.69
BRCA2-206ENST00000544455 MCMDC2Q4G0Z9 681 aa4.48□□□□□ -1.69
BRCA2-206ENST00000544455 PTF1AQ7RTS3 328 aa4.48□□□□□ -1.69
BRCA2-206ENST00000544455 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.48□□□□□ -1.693e-6■■■■■ 27.2
BRCA2-206ENST00000544455 DZIP3Q86Y13 1208 aaKnown RBP4.48□□□□□ -1.69
BRCA2-206ENST00000544455 TSPY26PQ9H489 355 aa4.48□□□□□ -1.69
BRCA2-206ENST00000544455 SOS2Q07890 1332 aaPredicted RBP4.48□□□□□ -1.69
BRCA2-206ENST00000544455 IRS4O14654 1257 aaPredicted RBP4.48□□□□□ -1.69
BRCA2-206ENST00000544455 RABL6Q3YEC7 729 aaPredicted RBP4.48□□□□□ -1.69
BRCA2-206ENST00000544455 MAST3O60307 1309 aa4.48□□□□□ -1.69
BRCA2-206ENST00000544455 ERVV-2B6SEH9 535 aa4.48□□□□□ -1.69
BRCA2-206ENST00000544455 METTL24Q5JXM2 366 aa4.48□□□□□ -1.69
BRCA2-206ENST00000544455 TTC6Q86TZ1 520 aa4.48□□□□□ -1.69
BRCA2-206ENST00000544455 SPC24Q8NBT2 197 aa4.48□□□□□ -1.69
BRCA2-206ENST00000544455 MTMR6Q9Y217 621 aa4.48□□□□□ -1.69
BRCA2-206ENST00000544455 LIG1P18858 919 aa4.48□□□□□ -1.69
BRCA2-206ENST00000544455 AP5Z1O43299 807 aa4.47□□□□□ -1.69
BRCA2-206ENST00000544455 SCRN1Q12765 414 aa4.47□□□□□ -1.69
BRCA2-206ENST00000544455 TCIRG1Q13488 830 aa4.47□□□□□ -1.69
BRCA2-206ENST00000544455 KBTBD3Q8NAB2 608 aa4.47□□□□□ -1.69
BRCA2-206ENST00000544455 HAUS7Q99871 368 aa4.47□□□□□ -1.69
BRCA2-206ENST00000544455 VIRMAQ69YN4 1812 aaKnown RBP4.47□□□□□ -1.69
BRCA2-206ENST00000544455 SMIM22K7EJ46 135 aa4.47□□□□□ -1.69
BRCA2-206ENST00000544455 POLR3DP05423 398 aaPredicted RBP4.47□□□□□ -1.69
BRCA2-206ENST00000544455 CCDC173Q0VFZ6 552 aa4.47□□□□□ -1.69
BRCA2-206ENST00000544455 ZKSCAN3Q9BRR0 538 aa4.47□□□□□ -1.69
BRCA2-206ENST00000544455 CHD2O14647 1828 aaKnown RBP4.47□□□□□ -1.69
BRCA2-206ENST00000544455 EXOC5O00471 708 aa4.47□□□□□ -1.69
BRCA2-206ENST00000544455 PTMAP06454 111 aaKnown RBP4.47□□□□□ -1.69
BRCA2-206ENST00000544455 HSPD1P10809 573 aaKnown RBP4.47□□□□□ -1.69
BRCA2-206ENST00000544455 ATP6V1AP38606 617 aa4.47□□□□□ -1.69
BRCA2-206ENST00000544455 SENP2Q9HC62 589 aa4.47□□□□□ -1.69
BRCA2-206ENST00000544455 HDAC5Q9UQL6 1122 aa4.47□□□□□ -1.69
BRCA2-206ENST00000544455 MED23Q9ULK4 1368 aa4.47□□□□□ -1.69
BRCA2-206ENST00000544455 PTMSP20962 102 aa4.47□□□□□ -1.69
BRCA2-206ENST00000544455 CCDC158Q5M9N0 1113 aa4.47□□□□□ -1.69
BRCA2-206ENST00000544455 CCDC82Q8N4S0 544 aa4.47□□□□□ -1.69
BRCA2-206ENST00000544455 CARD10Q9BWT7 1032 aa4.47□□□□□ -1.69
BRCA2-206ENST00000544455 APPP05067 770 aa4.47□□□□□ -1.69
BRCA2-206ENST00000544455 MCAMP43121 646 aa4.47□□□□□ -1.69
BRCA2-206ENST00000544455 ZNF445P59923 1031 aa4.47□□□□□ -1.69
BRCA2-206ENST00000544455 IFIT5Q13325 482 aaKnown RBP4.47□□□□□ -1.69
BRCA2-206ENST00000544455 RNF20Q5VTR2 975 aa4.47□□□□□ -1.69
BRCA2-206ENST00000544455 CCDC191Q8NCU4 936 aa4.47□□□□□ -1.69
BRCA2-206ENST00000544455 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.47□□□□□ -1.69
BRCA2-206ENST00000544455 CEP126Q9P2H0 1117 aa4.47□□□□□ -1.69
BRCA2-206ENST00000544455 ZNF142P52746 1687 aaPredicted RBP4.47□□□□□ -1.69
BRCA2-206ENST00000544455 TRPM3Q9HCF6 1732 aaPredicted RBP4.47□□□□□ -1.69
BRCA2-206ENST00000544455 UBN2Q6ZU65 1347 aa4.47□□□□□ -1.69
BRCA2-206ENST00000544455 E7EWF7 191 aa4.47□□□□□ -1.69
BRCA2-206ENST00000544455 H3BQV1 296 aa4.47□□□□□ -1.69
BRCA2-206ENST00000544455 RNF113AO15541 343 aaKnown RBP4.47□□□□□ -1.69
BRCA2-206ENST00000544455 CYP19A1P11511 503 aaPredicted RBP4.47□□□□□ -1.69
BRCA2-206ENST00000544455 MSNP26038 577 aaKnown RBP4.47□□□□□ -1.69
BRCA2-206ENST00000544455 IL15P40933 162 aaPredicted RBP4.47□□□□□ -1.69
BRCA2-206ENST00000544455 IFFO2Q5TF58 517 aa4.47□□□□□ -1.69
BRCA2-206ENST00000544455 BICD2Q8TD16 824 aa4.47□□□□□ -1.69
BRCA2-206ENST00000544455 PIH1D3Q9NQM4 214 aaKnown RBP4.47□□□□□ -1.69
BRCA2-206ENST00000544455 TOMM22Q9NS69 142 aa4.47□□□□□ -1.69
BRCA2-206ENST00000544455 SUSD4Q5VX71 490 aa4.47□□□□□ -1.69
BRCA2-206ENST00000544455 MIGA1Q8NAN2 632 aa4.47□□□□□ -1.69
BRCA2-206ENST00000544455 JAG2Q9Y219 1238 aa4.47□□□□□ -1.69
BRCA2-206ENST00000544455 CTDSPL2Q05D32 466 aa4.46□□□□□ -1.69
BRCA2-206ENST00000544455 TTLL11Q8NHH1 800 aa4.46□□□□□ -1.69
BRCA2-206ENST00000544455 WWC3Q9ULE0 1092 aa4.46□□□□□ -1.69
BRCA2-206ENST00000544455 FOXP2O15409 715 aa4.46□□□□□ -1.69
BRCA2-206ENST00000544455 PHKA1P46020 1223 aa4.46□□□□□ -1.69
BRCA2-206ENST00000544455 CMTR1Q8N1G2 835 aaKnown RBP4.46□□□□□ -1.69
BRCA2-206ENST00000544455 FAM184AQ8NB25 1140 aa4.46□□□□□ -1.69
BRCA2-206ENST00000544455 KDM3BQ7LBC6 1761 aa4.46□□□□□ -1.7
BRCA2-206ENST00000544455 HIP1O00291 1037 aa4.46□□□□□ -1.7
BRCA2-206ENST00000544455 RBM10P98175 930 aaKnown RBP4.46□□□□□ -1.7
BRCA2-206ENST00000544455 RRP12Q5JTH9 1297 aaKnown RBP4.46□□□□□ -1.7
BRCA2-206ENST00000544455 SLC9C2Q5TAH2 1124 aa4.46□□□□□ -1.7
BRCA2-206ENST00000544455 SPATA32Q96LK8 384 aa4.46□□□□□ -1.7
BRCA2-206ENST00000544455 ISCA1Q9BUE6 129 aa4.46□□□□□ -1.7
BRCA2-206ENST00000544455 PTPDC1A2A3K4 754 aa4.46□□□□□ -1.7
BRCA2-206ENST00000544455 NLRP10Q86W26 655 aa4.46□□□□□ -1.7
BRCA2-206ENST00000544455 DACT1Q9NYF0 836 aa4.46□□□□□ -1.7
BRCA2-206ENST00000544455 STARD3NLO95772 234 aa4.46□□□□□ -1.7
BRCA2-206ENST00000544455 LUZP1Q86V48 1076 aa4.46□□□□□ -1.7
BRCA2-206ENST00000544455 U3KPZ7 1027 aaPredicted RBP4.46□□□□□ -1.7
BRCA2-206ENST00000544455 CRKLP46109 303 aaKnown RBP4.46□□□□□ -1.7
BRCA2-206ENST00000544455 ZSCAN31Q96LW9 406 aaPredicted RBP4.46□□□□□ -1.7
BRCA2-206ENST00000544455 TTC12Q9H892 705 aaPredicted RBP4.46□□□□□ -1.7
BRCA2-206ENST00000544455 CTDNEP1O95476 244 aa4.46□□□□□ -1.7
BRCA2-206ENST00000544455 CTSWP56202 376 aa4.46□□□□□ -1.7
BRCA2-206ENST00000544455 ISM2Q6H9L7 571 aa4.46□□□□□ -1.7
BRCA2-206ENST00000544455 PRKAB2O43741 272 aa4.46□□□□□ -1.7
BRCA2-206ENST00000544455 ZMYM1Q5SVZ6 1142 aa4.46□□□□□ -1.7
BRCA2-206ENST00000544455 LMO7Q8WWI1 1683 aa4.46□□□□□ -1.7
BRCA2-206ENST00000544455 FGAP02671 866 aa4.46□□□□□ -1.7
BRCA2-206ENST00000544455 AIFM3Q96NN9 605 aa4.46□□□□□ -1.7
BRCA2-206ENST00000544455 R3HCC1Q9Y3T6 440 aaKnown RBP4.46□□□□□ -1.7
BRCA2-206ENST00000544455 C5P01031 1676 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms