RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 ZBTB40Q9NUA8 1239 aa21.36■■□□□ 1.01
RABGGTA-203ENST00000543002 PODXL2Q9NZ53 605 aa21.36■■□□□ 1.01
RABGGTA-203ENST00000543002 SPEF2Q9C093 1822 aa21.36■■□□□ 1.01
RABGGTA-203ENST00000543002 SUPT20HQ8NEM7 779 aa21.35■■□□□ 1.01
RABGGTA-203ENST00000543002 XDHP47989 1333 aa21.34■■□□□ 1.01
RABGGTA-203ENST00000543002 SRGAP3O43295 1099 aa21.34■■□□□ 1.01
RABGGTA-203ENST00000543002 PTPN12Q05209 780 aaKnown RBP21.34■■□□□ 1.01
RABGGTA-203ENST00000543002 ZNF277Q9NRM2 450 aaPredicted RBP21.34■■□□□ 1.01
RABGGTA-203ENST00000543002 CNNM1Q9NRU3 951 aa21.34■■□□□ 1.01
RABGGTA-203ENST00000543002 ANKIB1Q9P2G1 1089 aa21.34■■□□□ 1.01
RABGGTA-203ENST00000543002 CHD4Q14839 1912 aa21.34■■□□□ 1.01
RABGGTA-203ENST00000543002 SBF1O95248 1867 aa21.34■■□□□ 1.01
RABGGTA-203ENST00000543002 ATP8B2P98198 1209 aa21.33■■□□□ 1.01
RABGGTA-203ENST00000543002 C9orf131Q5VYM1 1079 aa21.33■■□□□ 1.01
RABGGTA-203ENST00000543002 KLHDC4Q8TBB5 520 aa21.33■■□□□ 1.01
RABGGTA-203ENST00000543002 PUS3Q9BZE2 481 aaKnown RBP21.33■■□□□ 1.01
RABGGTA-203ENST00000543002 ANKRD2Q9GZV1 360 aa21.33■■□□□ 1.01
RABGGTA-203ENST00000543002 RNF181Q9P0P0 153 aa21.33■■□□□ 1.01
RABGGTA-203ENST00000543002 LTBP1Q14766 1721 aa21.33■■□□□ 1.01
RABGGTA-203ENST00000543002 DUOX1Q9NRD9 1551 aa21.33■■□□□ 1
RABGGTA-203ENST00000543002 UTRNP46939 3433 aa21.32■■□□□ 1
RABGGTA-203ENST00000543002 PNMA6EA0A0J9YXQ4 647 aa21.32■■□□□ 1
RABGGTA-203ENST00000543002 CHRNDQ07001 517 aa21.32■■□□□ 1
RABGGTA-203ENST00000543002 TBC1D16Q8TBP0 767 aa21.32■■□□□ 1
RABGGTA-203ENST00000543002 VPS33BQ9H267 617 aa21.32■■□□□ 1
RABGGTA-203ENST00000543002 COPRSQ9NQ92 184 aa21.32■■□□□ 1
RABGGTA-203ENST00000543002 POLLQ9UGP5 575 aa21.32■■□□□ 1
RABGGTA-203ENST00000543002 RIPOR2Q9Y4F9 1068 aa21.32■■□□□ 1
RABGGTA-203ENST00000543002 C6orf229H3BNL8 230 aa21.31■■□□□ 1
RABGGTA-203ENST00000543002 ATP2B4P23634 1241 aa21.31■■□□□ 1
RABGGTA-203ENST00000543002 IARSP41252 1262 aaKnown RBP21.31■■□□□ 1
RABGGTA-203ENST00000543002 LRRC24Q50LG9 513 aa21.31■■□□□ 1
RABGGTA-203ENST00000543002 CEP85Q6P2H3 762 aa21.31■■□□□ 1
RABGGTA-203ENST00000543002 GGA1Q9UJY5 639 aa21.31■■□□□ 1
RABGGTA-203ENST00000543002 FBXO3Q9UK99 471 aa21.31■■□□□ 1
RABGGTA-203ENST00000543002 EYA2O00167 538 aa21.3■■□□□ 1
RABGGTA-203ENST00000543002 UFL1O94874 794 aa21.3■■□□□ 1
RABGGTA-203ENST00000543002 POLA2Q14181 598 aa21.3■■□□□ 1
RABGGTA-203ENST00000543002 SSH3Q8TE77 659 aa21.3■■□□□ 1
RABGGTA-203ENST00000543002 LEMD3Q9Y2U8 911 aa21.3■■□□□ 1
RABGGTA-203ENST00000543002 MROH5Q6ZUA9 1318 aa21.3■■□□□ 1
RABGGTA-203ENST00000543002 CRBNQ96SW2 442 aa21.29■■□□□ 1
RABGGTA-203ENST00000543002 EYA3Q99504 573 aa21.29■■□□□ 1
RABGGTA-203ENST00000543002 PA2G4Q9UQ80 394 aaKnown RBP21.29■■□□□ 1
RABGGTA-203ENST00000543002 CCDC88AQ3V6T2 1871 aa21.29■■□□□ 1
RABGGTA-203ENST00000543002 PPIP5K2O43314 1243 aa21.29■■□□□ 1
RABGGTA-203ENST00000543002 CIAO1O76071 339 aa21.29■■□□□ 1
RABGGTA-203ENST00000543002 KIAA2012Q0VF49 1180 aa21.29■■□□□ 1
RABGGTA-203ENST00000543002 AOC3Q16853 763 aa21.29■■□□□ 1
RABGGTA-203ENST00000543002 WASHC4Q2M389 1173 aa21.29■■□□□ 1
RABGGTA-203ENST00000543002 RPAP2Q8IXW5 612 aaPredicted RBP21.29■■□□□ 1
RABGGTA-203ENST00000543002 LARGE2Q8N3Y3 721 aa21.29■■□□□ 1
RABGGTA-203ENST00000543002 HELBQ8NG08 1087 aaPredicted RBP21.29■■□□□ 1
RABGGTA-203ENST00000543002 TAF5LO75529 589 aa21.28■■□□□ 1
RABGGTA-203ENST00000543002 ATG9AQ7Z3C6 839 aa21.28■■□□□ 1
RABGGTA-203ENST00000543002 SIL1Q9H173 461 aa21.28■■□□□ 1
RABGGTA-203ENST00000543002 ZNF804BA4D1E1 1349 aa21.27■■□□□ 1
RABGGTA-203ENST00000543002 DICER1Q9UPY3 1922 aaKnown RBP21.27■■□□□ 1
RABGGTA-203ENST00000543002 WTIPA6NIX2 430 aaPredicted RBP21.27■□□□□ 0.99
RABGGTA-203ENST00000543002 METTL24Q5JXM2 366 aa21.27■□□□□ 0.99
RABGGTA-203ENST00000543002 GPR101Q96P66 508 aaPredicted RBP21.27■□□□□ 0.99
RABGGTA-203ENST00000543002 ZC3H4Q9UPT8 1303 aaKnown RBP21.26■□□□□ 0.99
RABGGTA-203ENST00000543002 IL15P40933 162 aaPredicted RBP21.26■□□□□ 0.99
RABGGTA-203ENST00000543002 KCNJ4P48050 445 aa21.26■□□□□ 0.99
RABGGTA-203ENST00000543002 JDP2Q8WYK2 163 aa21.26■□□□□ 0.99
RABGGTA-203ENST00000543002 ZC3H12CQ9C0D7 883 aaKnown RBP21.26■□□□□ 0.99
RABGGTA-203ENST00000543002 A0A1B0GUL6 1792 aa21.25■□□□□ 0.99
RABGGTA-203ENST00000543002 RIMBP2O15034 1052 aa21.25■□□□□ 0.99
RABGGTA-203ENST00000543002 VGLL2Q8N8G2 317 aa21.25■□□□□ 0.99
RABGGTA-203ENST00000543002 COL4A5P29400 1685 aa21.24■□□□□ 0.99
RABGGTA-203ENST00000543002 SNAP23O00161 211 aa21.24■□□□□ 0.99
RABGGTA-203ENST00000543002 PDE8BO95263 885 aa21.24■□□□□ 0.99
RABGGTA-203ENST00000543002 UBE4AQ14139 1066 aa21.24■□□□□ 0.99
RABGGTA-203ENST00000543002 SIRT2Q8IXJ6 389 aa21.24■□□□□ 0.99
RABGGTA-203ENST00000543002 NIM1KQ8IY84 436 aa21.24■□□□□ 0.99
RABGGTA-203ENST00000543002 MED23Q9ULK4 1368 aa21.24■□□□□ 0.99
RABGGTA-203ENST00000543002 HMMRO75330 724 aa21.23■□□□□ 0.99
RABGGTA-203ENST00000543002 YY1P25490 414 aa21.23■□□□□ 0.99
RABGGTA-203ENST00000543002 C15orf52Q6ZUT6 534 aaKnown RBP21.23■□□□□ 0.99
RABGGTA-203ENST00000543002 NOP58Q9Y2X3 529 aaKnown RBP21.23■□□□□ 0.99
RABGGTA-203ENST00000543002 TIAM2Q8IVF5 1701 aa21.22■□□□□ 0.99
RABGGTA-203ENST00000543002 FZD9O00144 591 aa21.22■□□□□ 0.99
RABGGTA-203ENST00000543002 SURF6O75683 361 aaKnown RBP21.22■□□□□ 0.99
RABGGTA-203ENST00000543002 G3BP1Q13283 466 aaKnown RBP eCLIP21.22■□□□□ 0.99
RABGGTA-203ENST00000543002 AAMPQ13685 434 aa21.22■□□□□ 0.99
RABGGTA-203ENST00000543002 CEP126Q9P2H0 1117 aa21.22■□□□□ 0.99
RABGGTA-203ENST00000543002 IRS2Q9Y4H2 1338 aa21.21■□□□□ 0.99
RABGGTA-203ENST00000543002 KLRK1P26718 216 aa21.21■□□□□ 0.99
RABGGTA-203ENST00000543002 ZNRF3Q9ULT6 936 aa21.21■□□□□ 0.99
RABGGTA-203ENST00000543002 CENPBP07199 599 aaPredicted RBP21.2■□□□□ 0.98
RABGGTA-203ENST00000543002 PUM3Q15397 648 aaKnown RBP21.2■□□□□ 0.98
RABGGTA-203ENST00000543002 DOK7Q18PE1 504 aa21.2■□□□□ 0.98
RABGGTA-203ENST00000543002 TXNRD3Q86VQ6 643 aa21.2■□□□□ 0.98
RABGGTA-203ENST00000543002 EXOC6Q8TAG9 804 aa21.2■□□□□ 0.98
RABGGTA-203ENST00000543002 DBNDD1Q9H9R9 158 aa21.2■□□□□ 0.98
RABGGTA-203ENST00000543002 G3V3G9 751 aa21.19■□□□□ 0.98
RABGGTA-203ENST00000543002 FGFR2P21802 821 aa21.19■□□□□ 0.98
RABGGTA-203ENST00000543002 DCAF8Q5TAQ9 597 aa21.19■□□□□ 0.98
RABGGTA-203ENST00000543002 PCDHB15Q9Y5E8 787 aa21.19■□□□□ 0.98
RABGGTA-203ENST00000543002 ECE2O60344 883 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms