RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 PLEKHG2Q9H7P9 1386 aa6.14□□□□□ -1.43
PROM1-220ENST00000540805 CCDC66A2RUB6 948 aa6.14□□□□□ -1.43
PROM1-220ENST00000540805 H3BQV1 296 aa6.14□□□□□ -1.43
PROM1-220ENST00000540805 CPLX1O14810 134 aa6.14□□□□□ -1.43
PROM1-220ENST00000540805 EIF4A1P60842 406 aaKnown RBP6.14□□□□□ -1.43
PROM1-220ENST00000540805 MAP3K11Q16584 847 aa6.14□□□□□ -1.43
PROM1-220ENST00000540805 IFFO2Q5TF58 517 aa6.14□□□□□ -1.43
PROM1-220ENST00000540805 CCDC186Q7Z3E2 898 aa6.14□□□□□ -1.43
PROM1-220ENST00000540805 LRP10Q7Z4F1 713 aa6.14□□□□□ -1.43
PROM1-220ENST00000540805 GPATCH11Q8N954 259 aa6.14□□□□□ -1.43
PROM1-220ENST00000540805 TTC14Q96N46 770 aa6.14□□□□□ -1.43
PROM1-220ENST00000540805 LARP6Q9BRS8 491 aaKnown RBP6.14□□□□□ -1.43
PROM1-220ENST00000540805 NUP62CLQ9H1M0 184 aa6.14□□□□□ -1.43
PROM1-220ENST00000540805 TCEAL9Q9UHQ7 104 aa6.14□□□□□ -1.43
PROM1-220ENST00000540805 NRBP1Q9UHY1 535 aa6.14□□□□□ -1.43
PROM1-220ENST00000540805 LRP6O75581 1613 aa6.14□□□□□ -1.43
PROM1-220ENST00000540805 TJP1Q07157 1748 aa6.14□□□□□ -1.43
PROM1-220ENST00000540805 ARFGEF2Q9Y6D5 1785 aa6.14□□□□□ -1.43
PROM1-220ENST00000540805 F6X3S4 739 aa6.14□□□□□ -1.43
PROM1-220ENST00000540805 GNAI3P08754 354 aa6.14□□□□□ -1.43
PROM1-220ENST00000540805 SART3Q15020 963 aaKnown RBP6.14□□□□□ -1.43
PROM1-220ENST00000540805 UNC5CLQ8IV45 518 aa6.14□□□□□ -1.43
PROM1-220ENST00000540805 AMOTL1Q8IY63 956 aa6.14□□□□□ -1.43
PROM1-220ENST00000540805 C10orf67Q8IYJ2 551 aa6.14□□□□□ -1.43
PROM1-220ENST00000540805 SNX14Q9Y5W7 946 aa6.14□□□□□ -1.43
PROM1-220ENST00000540805 SOS2Q07890 1332 aaPredicted RBP6.14□□□□□ -1.43
PROM1-220ENST00000540805 GJB2P29033 226 aa6.13□□□□□ -1.43
PROM1-220ENST00000540805 TYRO3Q06418 890 aa6.13□□□□□ -1.43
PROM1-220ENST00000540805 RAD51AP2Q09MP3 1159 aa6.13□□□□□ -1.43
PROM1-220ENST00000540805 TRDNQ13061 729 aa6.13□□□□□ -1.43
PROM1-220ENST00000540805 KMT5BQ4FZB7 885 aa6.13□□□□□ -1.43
PROM1-220ENST00000540805 NFXL1Q6ZNB6 911 aa6.13□□□□□ -1.43
PROM1-220ENST00000540805 ANKRD24Q8TF21 1146 aa6.13□□□□□ -1.43
PROM1-220ENST00000540805 KCPQ6ZWJ8 1503 aa6.13□□□□□ -1.43
PROM1-220ENST00000540805 VPS37CA5D8V6 355 aaPredicted RBP6.13□□□□□ -1.43
PROM1-220ENST00000540805 TULP2O00295 520 aa6.13□□□□□ -1.43
PROM1-220ENST00000540805 ADCY9O60503 1353 aa6.13□□□□□ -1.43
PROM1-220ENST00000540805 COL5A2P05997 1499 aaPredicted RBP6.13□□□□□ -1.43
PROM1-220ENST00000540805 TPD52L1Q16890 204 aaPredicted RBP6.13□□□□□ -1.43
PROM1-220ENST00000540805 RUFY3Q7L099 469 aa6.13□□□□□ -1.43
PROM1-220ENST00000540805 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.13□□□□□ -1.43
PROM1-220ENST00000540805 CCDC83Q8IWF9 413 aa6.13□□□□□ -1.43
PROM1-220ENST00000540805 KRT222Q8N1A0 295 aa6.13□□□□□ -1.43
PROM1-220ENST00000540805 TRIM5Q9C035 493 aa6.13□□□□□ -1.43
PROM1-220ENST00000540805 ZCCHC17Q9NP64 241 aaKnown RBP6.13□□□□□ -1.43
PROM1-220ENST00000540805 MTMR6Q9Y217 621 aa6.13□□□□□ -1.43
PROM1-220ENST00000540805 MRVI1Q9Y6F6 885 aa6.13□□□□□ -1.43
PROM1-220ENST00000540805 TNNT3P45378 269 aaPredicted RBP6.13□□□□□ -1.43
PROM1-220ENST00000540805 PSEN1P49768 467 aa6.13□□□□□ -1.43
PROM1-220ENST00000540805 ATP8B2P98198 1209 aa6.13□□□□□ -1.43
PROM1-220ENST00000540805 TAF7Q15545 349 aaPredicted RBP6.13□□□□□ -1.43
PROM1-220ENST00000540805 RRP12Q5JTH9 1297 aaKnown RBP6.13□□□□□ -1.43
PROM1-220ENST00000540805 LUZP1Q86V48 1076 aa6.13□□□□□ -1.43
PROM1-220ENST00000540805 CCAR1Q8IX12 1150 aaKnown RBP6.13□□□□□ -1.43
PROM1-220ENST00000540805 LRRN4CLQ8ND94 238 aa6.13□□□□□ -1.43
PROM1-220ENST00000540805 KIF18AQ8NI77 898 aa6.13□□□□□ -1.43
PROM1-220ENST00000540805 IL25Q9H293 177 aa6.13□□□□□ -1.43
PROM1-220ENST00000540805 CNNM1Q9NRU3 951 aa6.13□□□□□ -1.43
PROM1-220ENST00000540805 MORC2Q9Y6X9 1032 aaPredicted RBP6.13□□□□□ -1.43
PROM1-220ENST00000540805 PNMA6EA0A0J9YXQ4 647 aa6.12□□□□□ -1.43
PROM1-220ENST00000540805 PRAMEF22A3QJZ6 481 aa6.12□□□□□ -1.43
PROM1-220ENST00000540805 POLR3GO15318 223 aaPredicted RBP6.12□□□□□ -1.43
PROM1-220ENST00000540805 SGSM2O43147 1006 aa6.12□□□□□ -1.43
PROM1-220ENST00000540805 RBM5P52756 815 aaKnown RBP eCLIP6.12□□□□□ -1.43
PROM1-220ENST00000540805 RBM6P78332 1123 aaKnown RBP6.12□□□□□ -1.43
PROM1-220ENST00000540805 KRT85P78386 507 aa6.12□□□□□ -1.43
PROM1-220ENST00000540805 PDIA6Q15084 440 aa6.12□□□□□ -1.43
PROM1-220ENST00000540805 AKAP4Q5JQC9 854 aa6.12□□□□□ -1.43
PROM1-220ENST00000540805 ZSCAN25Q6NSZ9 544 aa6.12□□□□□ -1.43
PROM1-220ENST00000540805 TMED8Q6PL24 325 aaPredicted RBP6.12□□□□□ -1.43
PROM1-220ENST00000540805 CPLX2Q6PUV4 134 aaKnown RBP6.12□□□□□ -1.43
PROM1-220ENST00000540805 ZNF397Q8NF99 534 aaPredicted RBP6.12□□□□□ -1.43
PROM1-220ENST00000540805 NRAPQ86VF7 1730 aa6.12□□□□□ -1.43
PROM1-220ENST00000540805 SOS1Q07889 1333 aaPredicted RBP6.12□□□□□ -1.43
PROM1-220ENST00000540805 ZKSCAN1P17029 563 aaPredicted RBP6.12□□□□□ -1.43
PROM1-220ENST00000540805 ZNF75DP51815 510 aa6.12□□□□□ -1.43
PROM1-220ENST00000540805 FAM212AQ96EL1 285 aa6.12□□□□□ -1.43
PROM1-220ENST00000540805 ZSCAN31Q96LW9 406 aaPredicted RBP6.12□□□□□ -1.43
PROM1-220ENST00000540805 CBX8Q9HC52 389 aa6.12□□□□□ -1.43
PROM1-220ENST00000540805 CASTP20810 708 aaKnown RBP6.12□□□□□ -1.43
PROM1-220ENST00000540805 CAMK4Q16566 473 aa6.12□□□□□ -1.43
PROM1-220ENST00000540805 ANO6Q4KMQ2 910 aa6.12□□□□□ -1.43
PROM1-220ENST00000540805 DNAJC21Q5F1R6 531 aaKnown RBP6.12□□□□□ -1.43
PROM1-220ENST00000540805 CEP135Q66GS9 1140 aa6.12□□□□□ -1.43
PROM1-220ENST00000540805 ZNF526Q8TF50 670 aaPredicted RBP6.12□□□□□ -1.43
PROM1-220ENST00000540805 TNMDQ9H2S6 317 aa6.12□□□□□ -1.43
PROM1-220ENST00000540805 PHAXQ9H814 394 aaKnown RBP6.12□□□□□ -1.43
PROM1-220ENST00000540805 SH2B1Q9NRF2 756 aaPredicted RBP6.12□□□□□ -1.43
PROM1-220ENST00000540805 ZNF446Q9NWS9 450 aa6.12□□□□□ -1.43
PROM1-220ENST00000540805 CCDC171Q6TFL3 1326 aa6.11□□□□□ -1.43
PROM1-220ENST00000540805 RNMTO43148 476 aaKnown RBP6.11□□□□□ -1.43
PROM1-220ENST00000540805 LARGE1O95461 756 aa6.11□□□□□ -1.43
PROM1-220ENST00000540805 MAP4K4O95819 1239 aaPredicted RBP6.11□□□□□ -1.43
PROM1-220ENST00000540805 E2F4Q16254 413 aa6.11□□□□□ -1.43
PROM1-220ENST00000540805 KIF6Q6ZMV9 814 aa6.11□□□□□ -1.43
PROM1-220ENST00000540805 PLA2G4DQ86XP0 818 aa6.11□□□□□ -1.43
PROM1-220ENST00000540805 CNTROBQ8N137 903 aa6.11□□□□□ -1.43
PROM1-220ENST00000540805 CABLES1Q8TDN4 633 aa6.11□□□□□ -1.43
PROM1-220ENST00000540805 LSG1Q9H089 658 aaKnown RBP6.11□□□□□ -1.43
PROM1-220ENST00000540805 IL1RAPL2Q9NP60 686 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms