RNA–Protein interactions for RNA: ENST00000536876.5

LTBR-206, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-206ENST00000536876 RTL5Q5HYW3 569 aaPredicted RBP22.9■■□□□ 1.26
LTBR-206ENST00000536876 TBC1D16Q8TBP0 767 aa22.9■■□□□ 1.26
LTBR-206ENST00000536876 GBA2Q9HCG7 927 aaPredicted RBP22.9■■□□□ 1.26
LTBR-206ENST00000536876 PAPPA2Q9BXP8 1791 aa22.89■■□□□ 1.26
LTBR-206ENST00000536876 MYH3P11055 1940 aa22.89■■□□□ 1.25
LTBR-206ENST00000536876 C6orf229H3BNL8 230 aa22.89■■□□□ 1.25
LTBR-206ENST00000536876 RALBP1Q15311 655 aa22.89■■□□□ 1.25
LTBR-206ENST00000536876 RGMBQ6NW40 437 aa22.89■■□□□ 1.25
LTBR-206ENST00000536876 LAS1LQ9Y4W2 734 aaKnown RBP22.89■■□□□ 1.25
LTBR-206ENST00000536876 IRS4O14654 1257 aaPredicted RBP22.88■■□□□ 1.25
LTBR-206ENST00000536876 KIF4BQ2VIQ3 1234 aa22.88■■□□□ 1.25
LTBR-206ENST00000536876 SEC31BQ9NQW1 1179 aa22.88■■□□□ 1.25
LTBR-206ENST00000536876 DBF4Q9UBU7 674 aaPredicted RBP22.88■■□□□ 1.25
LTBR-206ENST00000536876 TRIM28Q13263 835 aaKnown RBP22.87■■□□□ 1.25
LTBR-206ENST00000536876 GGA3Q9NZ52 723 aa22.87■■□□□ 1.25
LTBR-206ENST00000536876 VIL1P09327 827 aaKnown RBP22.86■■□□□ 1.25
LTBR-206ENST00000536876 RBM26Q5T8P6 1007 aaKnown RBP22.86■■□□□ 1.25
LTBR-206ENST00000536876 PODXL2Q9NZ53 605 aa22.86■■□□□ 1.25
LTBR-206ENST00000536876 SLC10A3P09131 477 aa22.85■■□□□ 1.25
LTBR-206ENST00000536876 RPS8P62241 208 aaKnown RBP22.85■■□□□ 1.25
LTBR-206ENST00000536876 KIF23Q02241 960 aaPredicted RBP22.85■■□□□ 1.25
LTBR-206ENST00000536876 DUSP27Q5VZP5 1158 aa22.85■■□□□ 1.25
LTBR-206ENST00000536876 RUNDC1Q96C34 613 aa22.85■■□□□ 1.25
LTBR-206ENST00000536876 EYA3Q99504 573 aa22.85■■□□□ 1.25
LTBR-206ENST00000536876 SAGE1Q9NXZ1 904 aa22.85■■□□□ 1.25
LTBR-206ENST00000536876 MYBBP1AQ9BQG0 1328 aaKnown RBP22.84■■□□□ 1.25
LTBR-206ENST00000536876 DCPSQ96C86 337 aaKnown RBP22.84■■□□□ 1.25
LTBR-206ENST00000536876 MBIPQ9NS73 344 aa22.84■■□□□ 1.25
LTBR-206ENST00000536876 HYPKQ9NX55 129 aa22.84■■□□□ 1.25
LTBR-206ENST00000536876 ZNF280AP59817 542 aaPredicted RBP22.83■■□□□ 1.25
LTBR-206ENST00000536876 C2orf69Q8N8R5 385 aa22.83■■□□□ 1.25
LTBR-206ENST00000536876 CDCA5Q96FF9 252 aa22.83■■□□□ 1.25
LTBR-206ENST00000536876 CFAP44Q96MT7 982 aa22.83■■□□□ 1.25
LTBR-206ENST00000536876 RNF186Q9NXI6 227 aa22.83■■□□□ 1.25
LTBR-206ENST00000536876 UFL1O94874 794 aa22.82■■□□□ 1.24
LTBR-206ENST00000536876 ZNF853P0CG23 659 aa22.82■■□□□ 1.24
LTBR-206ENST00000536876 ZBTB38Q8NAP3 1195 aaPredicted RBP22.82■■□□□ 1.24
LTBR-206ENST00000536876 PHAXQ9H814 394 aaKnown RBP22.82■■□□□ 1.24
LTBR-206ENST00000536876 ZNF157P51786 506 aaPredicted RBP22.81■■□□□ 1.24
LTBR-206ENST00000536876 RASAL3Q86YV0 1011 aa22.81■■□□□ 1.24
LTBR-206ENST00000536876 CCDC102AQ96A19 550 aa22.81■■□□□ 1.24
LTBR-206ENST00000536876 GMLQ99445 158 aa22.81■■□□□ 1.24
LTBR-206ENST00000536876 ADAMTS8Q9UP79 889 aa22.8■■□□□ 1.24
LTBR-206ENST00000536876 TRPA1O75762 1119 aa22.79■■□□□ 1.24
LTBR-206ENST00000536876 ANGEL2Q5VTE6 544 aaKnown RBP22.79■■□□□ 1.24
LTBR-206ENST00000536876 RSBN1LQ6PCB5 846 aaPredicted RBP22.79■■□□□ 1.24
LTBR-206ENST00000536876 SULF1Q8IWU6 871 aa22.79■■□□□ 1.24
LTBR-206ENST00000536876 JARID2Q92833 1246 aaPredicted RBP22.79■■□□□ 1.24
LTBR-206ENST00000536876 CSRNP1Q96S65 589 aa22.79■■□□□ 1.24
LTBR-206ENST00000536876 GGA1Q9UJY5 639 aa22.79■■□□□ 1.24
LTBR-206ENST00000536876 A0A1B0GUL6 1792 aa22.78■■□□□ 1.24
LTBR-206ENST00000536876 WTIPA6NIX2 430 aaPredicted RBP22.78■■□□□ 1.24
LTBR-206ENST00000536876 MYD88Q99836 296 aa22.78■■□□□ 1.24
LTBR-206ENST00000536876 ZC3H12CQ9C0D7 883 aaKnown RBP22.78■■□□□ 1.24
LTBR-206ENST00000536876 PCCAP05165 728 aaPredicted RBP22.77■■□□□ 1.24
LTBR-206ENST00000536876 SCARF1Q14162 830 aa22.77■■□□□ 1.24
LTBR-206ENST00000536876 RIC3Q7Z5B4 369 aa22.77■■□□□ 1.24
LTBR-206ENST00000536876 CCDC85AQ96PX6 553 aaPredicted RBP22.77■■□□□ 1.24
LTBR-206ENST00000536876 SCAF8Q9UPN6 1271 aaKnown RBP22.77■■□□□ 1.24
LTBR-206ENST00000536876 SOX10P56693 466 aa22.76■■□□□ 1.23
LTBR-206ENST00000536876 GOLGA2Q08379 1002 aa22.76■■□□□ 1.23
LTBR-206ENST00000536876 AGBL3Q8NEM8 1001 aa22.76■■□□□ 1.23
LTBR-206ENST00000536876 ANKIB1Q9P2G1 1089 aa22.76■■□□□ 1.23
LTBR-206ENST00000536876 LAMB1P07942 1786 aa22.76■■□□□ 1.23
LTBR-206ENST00000536876 MOB2Q70IA6 237 aa22.75■■□□□ 1.23
LTBR-206ENST00000536876 PDE8AO60658 829 aa22.74■■□□□ 1.23
LTBR-206ENST00000536876 WDR43Q15061 677 aaKnown RBP eCLIP22.74■■□□□ 1.23
LTBR-206ENST00000536876 CCDC152Q4G0S7 254 aa22.74■■□□□ 1.23
LTBR-206ENST00000536876 CCDC191Q8NCU4 936 aa22.74■■□□□ 1.23
LTBR-206ENST00000536876 MYOZ2Q9NPC6 264 aa22.74■■□□□ 1.23
LTBR-206ENST00000536876 XDHP47989 1333 aa22.74■■□□□ 1.23
LTBR-206ENST00000536876 PITPNM2Q9BZ72 1349 aa22.74■■□□□ 1.23
LTBR-206ENST00000536876 HTTP42858 3142 aa22.73■■□□□ 1.23
LTBR-206ENST00000536876 C8orf58Q8NAV2 365 aa22.72■■□□□ 1.23
LTBR-206ENST00000536876 MXD3Q9BW11 206 aa22.72■■□□□ 1.23
LTBR-206ENST00000536876 IFT57Q9NWB7 429 aa22.72■■□□□ 1.23
LTBR-206ENST00000536876 CWC25Q9NXE8 425 aaPredicted RBP22.72■■□□□ 1.23
LTBR-206ENST00000536876 MED23Q9ULK4 1368 aa22.72■■□□□ 1.23
LTBR-206ENST00000536876 ECM29Q5VYK3 1845 aa22.71■■□□□ 1.23
LTBR-206ENST00000536876 ELL2O00472 640 aaPredicted RBP22.71■■□□□ 1.23
LTBR-206ENST00000536876 USP17L8P0C7I0 530 aa22.71■■□□□ 1.23
LTBR-206ENST00000536876 DDX10Q13206 875 aaKnown RBP22.71■■□□□ 1.23
LTBR-206ENST00000536876 CTU1Q7Z7A3 348 aaKnown RBP22.71■■□□□ 1.23
LTBR-206ENST00000536876 METTL22Q9BUU2 404 aaPredicted RBP22.71■■□□□ 1.23
LTBR-206ENST00000536876 FKBP1BP68106 108 aa22.7■■□□□ 1.22
LTBR-206ENST00000536876 USP17L3A6NCW0 530 aa22.69■■□□□ 1.22
LTBR-206ENST00000536876 USP17L4A6NCW7 530 aa22.69■■□□□ 1.22
LTBR-206ENST00000536876 G3V3G9 751 aa22.69■■□□□ 1.22
LTBR-206ENST00000536876 IGKV5-2P06315 115 aa22.69■■□□□ 1.22
LTBR-206ENST00000536876 ATP2B4P23634 1241 aa22.69■■□□□ 1.22
LTBR-206ENST00000536876 CTSWP56202 376 aa22.69■■□□□ 1.22
LTBR-206ENST00000536876 NBPF9Q3BBW0 867 aa22.69■■□□□ 1.22
LTBR-206ENST00000536876 DCAF8Q5TAQ9 597 aa22.69■■□□□ 1.22
LTBR-206ENST00000536876 PRAMEF18Q5VWM3 479 aa22.69■■□□□ 1.22
LTBR-206ENST00000536876 USP17L1Q7RTZ2 530 aa22.69■■□□□ 1.22
LTBR-206ENST00000536876 ANKRD18AQ8IVF6 992 aa22.69■■□□□ 1.22
LTBR-206ENST00000536876 APAF1O14727 1248 aa22.68■■□□□ 1.22
LTBR-206ENST00000536876 DACT2Q5SW24 774 aa22.68■■□□□ 1.22
LTBR-206ENST00000536876 PODNQ7Z5L7 613 aa22.68■■□□□ 1.22
LTBR-206ENST00000536876 HSP90B1P14625 803 aaKnown RBP22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms