RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 PDE8AO60658 829 aa14.52□□□□□ -0.09
CLSTN3-206ENST00000535668 CCDC152Q4G0S7 254 aa14.52□□□□□ -0.09
CLSTN3-206ENST00000535668 PODNQ7Z5L7 613 aa14.52□□□□□ -0.09
CLSTN3-206ENST00000535668 PSME4Q14997 1843 aa14.52□□□□□ -0.09
CLSTN3-206ENST00000535668 PITPNM2Q9BZ72 1349 aa14.51□□□□□ -0.09
CLSTN3-206ENST00000535668 FAM155AB1AL88 458 aaPredicted RBP14.51□□□□□ -0.09
CLSTN3-206ENST00000535668 APAF1O14727 1248 aa14.51□□□□□ -0.09
CLSTN3-206ENST00000535668 FKBP1BP68106 108 aa14.51□□□□□ -0.09
CLSTN3-206ENST00000535668 CCDC30Q5VVM6 783 aa14.51□□□□□ -0.09
CLSTN3-206ENST00000535668 RIC3Q7Z5B4 369 aa14.51□□□□□ -0.09
CLSTN3-206ENST00000535668 REM2Q8IYK8 340 aaPredicted RBP14.51□□□□□ -0.09
CLSTN3-206ENST00000535668 CCDC102AQ96A19 550 aa14.51□□□□□ -0.09
CLSTN3-206ENST00000535668 ZC3H12CQ9C0D7 883 aaKnown RBP14.51□□□□□ -0.09
CLSTN3-206ENST00000535668 PHAXQ9H814 394 aaKnown RBP14.51□□□□□ -0.09
CLSTN3-206ENST00000535668 ZBTB12Q9Y330 459 aaPredicted RBP14.51□□□□□ -0.09
CLSTN3-206ENST00000535668 SHTN1A0MZ66 631 aa14.5□□□□□ -0.09
CLSTN3-206ENST00000535668 DDX58O95786 925 aaKnown RBP14.5□□□□□ -0.09
CLSTN3-206ENST00000535668 KSR2Q6VAB6 950 aa14.5□□□□□ -0.09
CLSTN3-206ENST00000535668 SAMD7Q7Z3H4 446 aa14.5□□□□□ -0.09
CLSTN3-206ENST00000535668 KRT26Q7Z3Y9 468 aa14.5□□□□□ -0.09
CLSTN3-206ENST00000535668 C8orf58Q8NAV2 365 aa14.5□□□□□ -0.09
CLSTN3-206ENST00000535668 DBNDD1Q9H9R9 158 aa14.5□□□□□ -0.09
CLSTN3-206ENST00000535668 CWC25Q9NXE8 425 aaPredicted RBP14.5□□□□□ -0.09
CLSTN3-206ENST00000535668 LAS1LQ9Y4W2 734 aaKnown RBP14.5□□□□□ -0.09
CLSTN3-206ENST00000535668 POLR2AP24928 1970 aaKnown RBP14.5□□□□□ -0.09
CLSTN3-206ENST00000535668 PDE4DIPQ5VU43 2346 aa14.49□□□□□ -0.09
CLSTN3-206ENST00000535668 XDHP47989 1333 aa14.49□□□□□ -0.09
CLSTN3-206ENST00000535668 IL16Q14005 1332 aa14.49□□□□□ -0.09
CLSTN3-206ENST00000535668 C6orf229H3BNL8 230 aa14.49□□□□□ -0.09
CLSTN3-206ENST00000535668 AOC2O75106 756 aa14.49□□□□□ -0.09
CLSTN3-206ENST00000535668 EGFRP00533 1210 aa14.49□□□□□ -0.09
CLSTN3-206ENST00000535668 RGMBQ6NW40 437 aa14.49□□□□□ -0.09
CLSTN3-206ENST00000535668 USP48Q86UV5 1035 aa14.49□□□□□ -0.09
CLSTN3-206ENST00000535668 PLA2G12BQ9BX93 195 aa14.49□□□□□ -0.09
CLSTN3-206ENST00000535668 GBA2Q9HCG7 927 aaPredicted RBP14.49□□□□□ -0.09
CLSTN3-206ENST00000535668 SEC31BQ9NQW1 1179 aa14.49□□□□□ -0.09
CLSTN3-206ENST00000535668 KCNQ5Q9NR82 932 aa14.49□□□□□ -0.09
CLSTN3-206ENST00000535668 BSDC1Q9NW68 430 aaPredicted RBP14.49□□□□□ -0.09
CLSTN3-206ENST00000535668 GGA1Q9UJY5 639 aa14.49□□□□□ -0.09
CLSTN3-206ENST00000535668 HUNKP57058 714 aa14.48□□□□□ -0.09
CLSTN3-206ENST00000535668 RSBN1LQ6PCB5 846 aaPredicted RBP14.48□□□□□ -0.09
CLSTN3-206ENST00000535668 DCPSQ96C86 337 aaKnown RBP14.48□□□□□ -0.09
CLSTN3-206ENST00000535668 MED23Q9ULK4 1368 aa14.47□□□□□ -0.09
CLSTN3-206ENST00000535668 IGKV5-2P06315 115 aa14.47□□□□□ -0.09
CLSTN3-206ENST00000535668 ATP2B4P23634 1241 aa14.47□□□□□ -0.09
CLSTN3-206ENST00000535668 KIF4BQ2VIQ3 1234 aa14.47□□□□□ -0.09
CLSTN3-206ENST00000535668 C2orf69Q8N8R5 385 aa14.47□□□□□ -0.09
CLSTN3-206ENST00000535668 TTLL11Q8NHH1 800 aa14.47□□□□□ -0.09
CLSTN3-206ENST00000535668 H7C1W4 665 aa14.46□□□□□ -0.09
CLSTN3-206ENST00000535668 RIMBP2O15034 1052 aa14.46□□□□□ -0.09
CLSTN3-206ENST00000535668 TBC1D10BQ4KMP7 808 aaPredicted RBP14.46□□□□□ -0.09
CLSTN3-206ENST00000535668 NOM1Q5C9Z4 860 aaKnown RBP14.46□□□□□ -0.09
CLSTN3-206ENST00000535668 CDC5LQ99459 802 aaKnown RBP14.46□□□□□ -0.09
CLSTN3-206ENST00000535668 MYD88Q99836 296 aa14.46□□□□□ -0.09
CLSTN3-206ENST00000535668 ANKIB1Q9P2G1 1089 aa14.46□□□□□ -0.09
CLSTN3-206ENST00000535668 CACNA1FO60840 1977 aa14.45□□□□□ -0.1
CLSTN3-206ENST00000535668 UFL1O94874 794 aa14.45□□□□□ -0.1
CLSTN3-206ENST00000535668 SLC10A3P09131 477 aa14.45□□□□□ -0.1
CLSTN3-206ENST00000535668 CTSWP56202 376 aa14.45□□□□□ -0.1
CLSTN3-206ENST00000535668 DOK7Q18PE1 504 aa14.45□□□□□ -0.1
CLSTN3-206ENST00000535668 PAXIP1Q6ZW49 1069 aaPredicted RBP14.45□□□□□ -0.1
CLSTN3-206ENST00000535668 ANKRD18AQ8IVF6 992 aa14.45□□□□□ -0.1
CLSTN3-206ENST00000535668 SULF1Q8IWU6 871 aa14.45□□□□□ -0.1
CLSTN3-206ENST00000535668 MINPP1Q9UNW1 487 aa14.45□□□□□ -0.1
CLSTN3-206ENST00000535668 MYO3BQ8WXR4 1341 aa14.44□□□□□ -0.1
CLSTN3-206ENST00000535668 CASP8AP2Q9UKL3 1982 aa14.44□□□□□ -0.1
CLSTN3-206ENST00000535668 PI4KAP2A4QPH2 592 aa14.44□□□□□ -0.1
CLSTN3-206ENST00000535668 USP17L3A6NCW0 530 aa14.44□□□□□ -0.1
CLSTN3-206ENST00000535668 USP17L4A6NCW7 530 aa14.44□□□□□ -0.1
CLSTN3-206ENST00000535668 CSF1RP07333 972 aa14.44□□□□□ -0.1
CLSTN3-206ENST00000535668 USP17L8P0C7I0 530 aa14.44□□□□□ -0.1
CLSTN3-206ENST00000535668 STRIP1Q5VSL9 837 aa14.44□□□□□ -0.1
CLSTN3-206ENST00000535668 USP17L1Q7RTZ2 530 aa14.44□□□□□ -0.1
CLSTN3-206ENST00000535668 TSPYL6Q8N831 410 aa14.44□□□□□ -0.1
CLSTN3-206ENST00000535668 PI4KAP1Q8N8J0 262 aa14.44□□□□□ -0.1
CLSTN3-206ENST00000535668 ZIC5Q96T25 663 aa14.44□□□□□ -0.1
CLSTN3-206ENST00000535668 MAP3K2Q9Y2U5 619 aa14.44□□□□□ -0.1
CLSTN3-206ENST00000535668 ZNF646O15015 1829 aaPredicted RBP14.43□□□□□ -0.1
CLSTN3-206ENST00000535668 MYH3P11055 1940 aa14.43□□□□□ -0.1
CLSTN3-206ENST00000535668 NEURL1BA8MQ27 555 aa14.43□□□□□ -0.1
CLSTN3-206ENST00000535668 CASP7P55210 303 aa14.43□□□□□ -0.1
CLSTN3-206ENST00000535668 RTL5Q5HYW3 569 aaPredicted RBP14.43□□□□□ -0.1
CLSTN3-206ENST00000535668 DACT2Q5SW24 774 aa14.43□□□□□ -0.1
CLSTN3-206ENST00000535668 C15orf52Q6ZUT6 534 aaKnown RBP14.43□□□□□ -0.1
CLSTN3-206ENST00000535668 WWC1Q8IX03 1113 aa14.43□□□□□ -0.1
CLSTN3-206ENST00000535668 CFHR5Q9BXR6 569 aa14.43□□□□□ -0.1
CLSTN3-206ENST00000535668 MCOLN1Q9GZU1 580 aa14.43□□□□□ -0.1
CLSTN3-206ENST00000535668 COA1Q9GZY4 146 aa14.43□□□□□ -0.1
CLSTN3-206ENST00000535668 GGA3Q9NZ52 723 aa14.43□□□□□ -0.1
CLSTN3-206ENST00000535668 LEMD3Q9Y2U8 911 aa14.43□□□□□ -0.1
CLSTN3-206ENST00000535668 PAPPA2Q9BXP8 1791 aa14.42□□□□□ -0.1
CLSTN3-206ENST00000535668 ADM5C9JUS6 153 aa14.42□□□□□ -0.1
CLSTN3-206ENST00000535668 ELL2O00472 640 aaPredicted RBP14.42□□□□□ -0.1
CLSTN3-206ENST00000535668 NEXNQ0ZGT2 675 aa14.42□□□□□ -0.1
CLSTN3-206ENST00000535668 SCARF1Q14162 830 aa14.42□□□□□ -0.1
CLSTN3-206ENST00000535668 CDCA5Q96FF9 252 aa14.42□□□□□ -0.1
CLSTN3-206ENST00000535668 ZBED3Q96IU2 234 aaPredicted RBP14.42□□□□□ -0.1
CLSTN3-206ENST00000535668 CSRNP1Q96S65 589 aa14.42□□□□□ -0.1
CLSTN3-206ENST00000535668 MYOZ2Q9NPC6 264 aa14.42□□□□□ -0.1
CLSTN3-206ENST00000535668 CCT4P50991 539 aaKnown RBP14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms