RNA–Protein interactions for RNA: ENST00000535601.5

HTATSF1-204, Transcript of HIV-1 Tat specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTATSF1, Length 3,019 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-204ENST00000535601 MEX3CQ5U5Q3 659 aaKnown RBP21.96■■□□□ 1.11
HTATSF1-204ENST00000535601 VPS72Q15906 364 aa21.95■■□□□ 1.1
HTATSF1-204ENST00000535601 JCADQ9P266 1359 aa21.95■■□□□ 1.1
HTATSF1-204ENST00000535601 ANKRD18BA2A2Z9 1011 aa21.95■■□□□ 1.1
HTATSF1-204ENST00000535601 TTC39AQ5SRH9 613 aa21.95■■□□□ 1.1
HTATSF1-204ENST00000535601 CIAO1O76071 339 aa21.94■■□□□ 1.1
HTATSF1-204ENST00000535601 AMIGO3Q86WK7 504 aa21.94■■□□□ 1.1
HTATSF1-204ENST00000535601 NECAB1Q8N987 351 aa21.94■■□□□ 1.1
HTATSF1-204ENST00000535601 KBTBD3Q8NAB2 608 aa21.94■■□□□ 1.1
HTATSF1-204ENST00000535601 RIC1Q4ADV7 1423 aa21.94■■□□□ 1.1
HTATSF1-204ENST00000535601 TAF1P21675 1872 aa21.94■■□□□ 1.1
HTATSF1-204ENST00000535601 HIP1O00291 1037 aa21.94■■□□□ 1.1
HTATSF1-204ENST00000535601 HSPA1LP34931 641 aa21.94■■□□□ 1.1
HTATSF1-204ENST00000535601 PLA2G12BQ9BX93 195 aa21.94■■□□□ 1.1
HTATSF1-204ENST00000535601 RIPOR2Q9Y4F9 1068 aa21.94■■□□□ 1.1
HTATSF1-204ENST00000535601 GBP4Q96PP9 640 aa21.93■■□□□ 1.1
HTATSF1-204ENST00000535601 LRRC2Q9BYS8 371 aa21.93■■□□□ 1.1
HTATSF1-204ENST00000535601 PDRG1Q9NUG6 133 aa21.93■■□□□ 1.1
HTATSF1-204ENST00000535601 ERVV-1B6SEH8 477 aa21.93■■□□□ 1.1
HTATSF1-204ENST00000535601 PDE8AO60658 829 aa21.93■■□□□ 1.1
HTATSF1-204ENST00000535601 ZAP70P43403 619 aa21.93■■□□□ 1.1
HTATSF1-204ENST00000535601 ATP2B3Q16720 1220 aa21.93■■□□□ 1.1
HTATSF1-204ENST00000535601 CCDC83Q8IWF9 413 aa21.93■■□□□ 1.1
HTATSF1-204ENST00000535601 CDHR2Q9BYE9 1310 aa21.92■■□□□ 1.1
HTATSF1-204ENST00000535601 WTIPA6NIX2 430 aaPredicted RBP21.92■■□□□ 1.1
HTATSF1-204ENST00000535601 ZKSCAN1P17029 563 aaPredicted RBP21.92■■□□□ 1.1
HTATSF1-204ENST00000535601 SRP68Q9UHB9 627 aaKnown RBP21.92■■□□□ 1.1
HTATSF1-204ENST00000535601 MYO5AQ9Y4I1 1855 aaKnown RBP21.91■■□□□ 1.1
HTATSF1-204ENST00000535601 CYP2E1P05181 493 aaPredicted RBP21.91■■□□□ 1.1
HTATSF1-204ENST00000535601 C3orf67Q6ZVT6 689 aa21.91■■□□□ 1.1
HTATSF1-204ENST00000535601 CUL4AQ13619 759 aa21.91■■□□□ 1.1
HTATSF1-204ENST00000535601 CYP46A1Q9Y6A2 500 aa21.91■■□□□ 1.1
HTATSF1-204ENST00000535601 SH3TC1Q8TE82 1336 aa21.91■■□□□ 1.1
HTATSF1-204ENST00000535601 MCMDC2Q4G0Z9 681 aa21.9■■□□□ 1.1
HTATSF1-204ENST00000535601 UTP14AQ9BVJ6 771 aaKnown RBP21.9■■□□□ 1.1
HTATSF1-204ENST00000535601 M0R2C6 588 aa21.9■■□□□ 1.1
HTATSF1-204ENST00000535601 STK3Q13188 491 aa21.9■■□□□ 1.1
HTATSF1-204ENST00000535601 CCDC158Q5M9N0 1113 aa21.9■■□□□ 1.1
HTATSF1-204ENST00000535601 COL4A1P02462 1669 aa21.9■■□□□ 1.1
HTATSF1-204ENST00000535601 DDX11L8A8MPP1 907 aa21.9■■□□□ 1.1
HTATSF1-204ENST00000535601 GPR108Q9NPR9 543 aa21.9■■□□□ 1.1
HTATSF1-204ENST00000535601 SPEF2Q9C093 1822 aa21.89■■□□□ 1.1
HTATSF1-204ENST00000535601 MCM2P49736 904 aa21.89■■□□□ 1.1
HTATSF1-204ENST00000535601 FNBP4Q8N3X1 1017 aaPredicted RBP21.89■■□□□ 1.1
HTATSF1-204ENST00000535601 TCHHQ07283 1943 aa21.89■■□□□ 1.09
HTATSF1-204ENST00000535601 MCAMP43121 646 aa21.89■■□□□ 1.09
HTATSF1-204ENST00000535601 PHKA1P46020 1223 aa21.89■■□□□ 1.09
HTATSF1-204ENST00000535601 NUCB2P80303 420 aa21.89■■□□□ 1.09
HTATSF1-204ENST00000535601 WASHC4Q2M389 1173 aa21.89■■□□□ 1.09
HTATSF1-204ENST00000535601 TTLL5Q6EMB2 1281 aa21.89■■□□□ 1.09
HTATSF1-204ENST00000535601 IL17RAQ96F46 866 aa21.89■■□□□ 1.09
HTATSF1-204ENST00000535601 ZSWIM6Q9HCJ5 1215 aa21.89■■□□□ 1.09
HTATSF1-204ENST00000535601 OSBP2Q969R2 916 aa21.88■■□□□ 1.09
HTATSF1-204ENST00000535601 GDPD2Q9HCC8 539 aa21.88■■□□□ 1.09
HTATSF1-204ENST00000535601 CWC22Q9HCG8 908 aaKnown RBP21.88■■□□□ 1.09
HTATSF1-204ENST00000535601 LIMCH1Q9UPQ0 1083 aa21.88■■□□□ 1.09
HTATSF1-204ENST00000535601 CYP21A2P08686 494 aa21.88■■□□□ 1.09
HTATSF1-204ENST00000535601 NCLP19338 710 aaKnown RBP21.88■■□□□ 1.09
HTATSF1-204ENST00000535601 ME3Q16798 604 aa21.88■■□□□ 1.09
HTATSF1-204ENST00000535601 TPCN1Q9ULQ1 816 aa21.88■■□□□ 1.09
HTATSF1-204ENST00000535601 MAST3O60307 1309 aa21.88■■□□□ 1.09
HTATSF1-204ENST00000535601 ST3GAL1Q11201 340 aa21.88■■□□□ 1.09
HTATSF1-204ENST00000535601 PPFIA3O75145 1194 aa21.87■■□□□ 1.09
HTATSF1-204ENST00000535601 PHF14O94880 888 aa21.87■■□□□ 1.09
HTATSF1-204ENST00000535601 IQSEC3Q9UPP2 1182 aaPredicted RBP21.87■■□□□ 1.09
HTATSF1-204ENST00000535601 AKAP2Q9Y2D5 859 aa21.87■■□□□ 1.09
HTATSF1-204ENST00000535601 NTSR2O95665 410 aa21.87■■□□□ 1.09
HTATSF1-204ENST00000535601 ERFEQ4G0M1 354 aa21.87■■□□□ 1.09
HTATSF1-204ENST00000535601 BRPF3Q9ULD4 1205 aa21.87■■□□□ 1.09
HTATSF1-204ENST00000535601 CHST3Q7LGC8 479 aa21.86■■□□□ 1.09
HTATSF1-204ENST00000535601 VGLL2Q8N8G2 317 aa21.86■■□□□ 1.09
HTATSF1-204ENST00000535601 SMARCC1Q92922 1105 aaPredicted RBP21.86■■□□□ 1.09
HTATSF1-204ENST00000535601 AFF2P51816 1311 aa21.86■■□□□ 1.09
HTATSF1-204ENST00000535601 EPB41L2O43491 1005 aaKnown RBP21.86■■□□□ 1.09
HTATSF1-204ENST00000535601 PRPF40AO75400 957 aaKnown RBP21.86■■□□□ 1.09
HTATSF1-204ENST00000535601 STOX1Q6ZVD7 989 aa21.86■■□□□ 1.09
HTATSF1-204ENST00000535601 GNPATO15228 680 aa21.85■■□□□ 1.09
HTATSF1-204ENST00000535601 HAND2P61296 217 aa21.85■■□□□ 1.09
HTATSF1-204ENST00000535601 USPL1Q5W0Q7 1092 aa21.85■■□□□ 1.09
HTATSF1-204ENST00000535601 SLC51AQ86UW1 340 aa21.85■■□□□ 1.09
HTATSF1-204ENST00000535601 PDE8BO95263 885 aa21.85■■□□□ 1.09
HTATSF1-204ENST00000535601 BLOC1S2Q6QNY1 142 aa21.85■■□□□ 1.09
HTATSF1-204ENST00000535601 ANO8Q9HCE9 1232 aaPredicted RBP21.85■■□□□ 1.09
HTATSF1-204ENST00000535601 TBC1D9BQ66K14 1250 aa21.85■■□□□ 1.09
HTATSF1-204ENST00000535601 KCNB2Q92953 911 aa21.85■■□□□ 1.09
HTATSF1-204ENST00000535601 MPHOSPH8Q99549 860 aa21.85■■□□□ 1.09
HTATSF1-204ENST00000535601 RNF113AO15541 343 aaKnown RBP21.84■■□□□ 1.09
HTATSF1-204ENST00000535601 PUS7LQ9H0K6 701 aaKnown RBP21.84■■□□□ 1.09
HTATSF1-204ENST00000535601 ZMYM1Q5SVZ6 1142 aa21.84■■□□□ 1.09
HTATSF1-204ENST00000535601 RPAP1Q9BWH6 1393 aaPredicted RBP21.84■■□□□ 1.09
HTATSF1-204ENST00000535601 CERKQ8TCT0 537 aa21.83■■□□□ 1.09
HTATSF1-204ENST00000535601 CCNL1Q9UK58 526 aaPredicted RBP21.83■■□□□ 1.09
HTATSF1-204ENST00000535601 IDH1O75874 414 aaKnown RBP21.83■■□□□ 1.08
HTATSF1-204ENST00000535601 HSPD1P10809 573 aaKnown RBP21.83■■□□□ 1.08
HTATSF1-204ENST00000535601 RNF20Q5VTR2 975 aa21.83■■□□□ 1.08
HTATSF1-204ENST00000535601 DDX49Q9Y6V7 483 aaKnown RBP21.83■■□□□ 1.08
HTATSF1-204ENST00000535601 BTAF1O14981 1849 aa21.83■■□□□ 1.08
HTATSF1-204ENST00000535601 AKAP11Q9UKA4 1901 aa21.83■■□□□ 1.08
HTATSF1-204ENST00000535601 CCDC102BQ68D86 513 aa21.82■■□□□ 1.08
HTATSF1-204ENST00000535601 PIH1D3Q9NQM4 214 aaKnown RBP21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms