RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, human

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAPN1-222	ENST00000532285	IGHMBP2	P38935	993 aa	Known RBP	29.06	■■■□□ 2.24
CAPN1-222	ENST00000532285	FAM161A	Q3B820	660 aa		29.06	■■■□□ 2.24
CAPN1-222	ENST00000532285	CEP350	Q5VT06	3117 aa		29.05	■■■□□ 2.24
CAPN1-222	ENST00000532285	LMOD1	P29536	600 aa	Predicted RBP	29.04	■■■□□ 2.24
CAPN1-222	ENST00000532285	EPHX2	P34913	555 aa		29.04	■■■□□ 2.24
CAPN1-222	ENST00000532285	APLP1	P51693	650 aa		29.04	■■■□□ 2.24
CAPN1-222	ENST00000532285	BRPF1	P55201	1214 aa	Predicted RBP	29.04	■■■□□ 2.24
CAPN1-222	ENST00000532285	CIAPIN1	Q6FI81	312 aa		29.04	■■■□□ 2.24
CAPN1-222	ENST00000532285	ZC3H12C	Q9C0D7	883 aa	Known RBP	29.04	■■■□□ 2.24
CAPN1-222	ENST00000532285	MINPP1	Q9UNW1	487 aa		29.04	■■■□□ 2.24
CAPN1-222	ENST00000532285	ANKRD18B	A2A2Z9	1011 aa		29.03	■■■□□ 2.24
CAPN1-222	ENST00000532285	ATP2B4	P23634	1241 aa		29.03	■■■□□ 2.24
CAPN1-222	ENST00000532285	TNIP1	Q15025	636 aa		29.03	■■■□□ 2.24
CAPN1-222	ENST00000532285	PNMA8A	Q86V59	439 aa	Predicted RBP	29.03	■■■□□ 2.24
CAPN1-222	ENST00000532285	MPHOSPH8	Q99549	860 aa		29.03	■■■□□ 2.24
CAPN1-222	ENST00000532285	UTY	O14607	1347 aa		29.02	■■■□□ 2.24
CAPN1-222	ENST00000532285	YDJC	A8MPS7	323 aa		29.02	■■■□□ 2.24
CAPN1-222	ENST00000532285	IFIT5	Q13325	482 aa	Known RBP	29.02	■■■□□ 2.24
CAPN1-222	ENST00000532285	CHADL	Q6NUI6	762 aa		29.02	■■■□□ 2.24
CAPN1-222	ENST00000532285	LMBR1L	Q6UX01	489 aa		29.02	■■■□□ 2.24
CAPN1-222	ENST00000532285	LDHD	Q86WU2	507 aa		29.02	■■■□□ 2.24
CAPN1-222	ENST00000532285	DBNDD1	Q9H9R9	158 aa		29.02	■■■□□ 2.24
CAPN1-222	ENST00000532285	RAD17	O75943	681 aa		29.01	■■■□□ 2.23
CAPN1-222	ENST00000532285	POTEI	P0CG38	1075 aa		29.01	■■■□□ 2.23
CAPN1-222	ENST00000532285	POTEJ	P0CG39	1038 aa		29.01	■■■□□ 2.23
CAPN1-222	ENST00000532285	SCNN1D	P51172	638 aa		29.01	■■■□□ 2.23
CAPN1-222	ENST00000532285	RARS	P54136	660 aa	Known RBP	29.01	■■■□□ 2.23
CAPN1-222	ENST00000532285	GPR101	Q96P66	508 aa	Predicted RBP	29.01	■■■□□ 2.23
CAPN1-222	ENST00000532285	CHMP3	Q9Y3E7	222 aa		29.01	■■■□□ 2.23
CAPN1-222	ENST00000532285	EAPP	Q56P03	285 aa	Predicted RBP	29	■■■□□ 2.23
CAPN1-222	ENST00000532285	EPHA10	Q5JZY3	1008 aa		29	■■■□□ 2.23
CAPN1-222	ENST00000532285	NOB1	Q9ULX3	412 aa	Known RBP	29	■■■□□ 2.23
CAPN1-222	ENST00000532285	ADAMTSL1	Q8N6G6	1762 aa		29	■■■□□ 2.23
CAPN1-222	ENST00000532285	ECE2	O60344	883 aa		28.99	■■■□□ 2.23
CAPN1-222	ENST00000532285	NBPF7	P0C2Y1	421 aa	Predicted RBP	28.99	■■■□□ 2.23
CAPN1-222	ENST00000532285	DOK7	Q18PE1	504 aa		28.99	■■■□□ 2.23
CAPN1-222	ENST00000532285		G3V3G9	751 aa		28.98	■■■□□ 2.23
CAPN1-222	ENST00000532285	EPS15	P42566	896 aa		28.98	■■■□□ 2.23
CAPN1-222	ENST00000532285	DCAF8	Q5TAQ9	597 aa		28.98	■■■□□ 2.23
CAPN1-222	ENST00000532285	SUCLG2	Q96I99	432 aa		28.98	■■■□□ 2.23
CAPN1-222	ENST00000532285	ANKRD2	Q9GZV1	360 aa		28.98	■■■□□ 2.23
CAPN1-222	ENST00000532285	GMPS	P49915	693 aa	Predicted RBP	28.97	■■■□□ 2.23
CAPN1-222	ENST00000532285	CCT4	P50991	539 aa	Known RBP	28.97	■■■□□ 2.23
CAPN1-222	ENST00000532285	CCDC57	Q2TAC2	916 aa		28.97	■■■□□ 2.23
CAPN1-222	ENST00000532285	GPRC5D	Q9NZD1	345 aa		28.97	■■■□□ 2.23
CAPN1-222	ENST00000532285	SCN9A	Q15858	1988 aa		28.96	■■■□□ 2.23
CAPN1-222	ENST00000532285	API5	Q9BZZ5	524 aa	Known RBP	28.96	■■■□□ 2.23
CAPN1-222	ENST00000532285	CLEC11A	Q9Y240	323 aa		28.96	■■■□□ 2.23
CAPN1-222	ENST00000532285	LEMD3	Q9Y2U8	911 aa		28.96	■■■□□ 2.23
CAPN1-222	ENST00000532285	PSME4	Q14997	1843 aa		28.95	■■■□□ 2.23
CAPN1-222	ENST00000532285	KAZALD1	Q96I82	304 aa		28.95	■■■□□ 2.22
CAPN1-222	ENST00000532285		A0A1B0GUL6	1792 aa		28.95	■■■□□ 2.22
CAPN1-222	ENST00000532285	KIF16B	Q96L93	1317 aa		28.94	■■■□□ 2.22
CAPN1-222	ENST00000532285	MED23	Q9ULK4	1368 aa		28.94	■■■□□ 2.22
CAPN1-222	ENST00000532285	PSMD14	O00487	310 aa		28.94	■■■□□ 2.22
CAPN1-222	ENST00000532285	USP50	Q70EL3	339 aa	Predicted RBP	28.94	■■■□□ 2.22
CAPN1-222	ENST00000532285	USP44	Q9H0E7	712 aa		28.94	■■■□□ 2.22
CAPN1-222	ENST00000532285	CHRND	Q07001	517 aa		28.93	■■■□□ 2.22
CAPN1-222	ENST00000532285	TAF7L	Q5H9L4	462 aa		28.93	■■■□□ 2.22
CAPN1-222	ENST00000532285	ARHGAP45	Q92619	1136 aa		28.93	■■■□□ 2.22
CAPN1-222	ENST00000532285	KCNQ5	Q9NR82	932 aa		28.93	■■■□□ 2.22
CAPN1-222	ENST00000532285	ADARB2	Q9NS39	739 aa	Known RBP	28.93	■■■□□ 2.22
CAPN1-222	ENST00000532285	ZBED9	Q6R2W3	1325 aa		28.93	■■■□□ 2.22
CAPN1-222	ENST00000532285	WTIP	A6NIX2	430 aa	Predicted RBP	28.92	■■■□□ 2.22
CAPN1-222	ENST00000532285	BICC1	Q9H694	974 aa	Known RBP	28.92	■■■□□ 2.22
CAPN1-222	ENST00000532285	DPF2	Q92785	391 aa		28.91	■■■□□ 2.22
CAPN1-222	ENST00000532285	ZNF804B	A4D1E1	1349 aa		28.91	■■■□□ 2.22
CAPN1-222	ENST00000532285	RABL6	Q3YEC7	729 aa	Predicted RBP	28.9	■■■□□ 2.22
CAPN1-222	ENST00000532285	LDHAL6A	Q6ZMR3	332 aa		28.9	■■■□□ 2.22
CAPN1-222	ENST00000532285	PODN	Q7Z5L7	613 aa		28.9	■■■□□ 2.22
CAPN1-222	ENST00000532285	ZNF594	Q96JF6	807 aa	Predicted RBP	28.9	■■■□□ 2.22
CAPN1-222	ENST00000532285	CNOT7	Q9UIV1	285 aa	Known RBP	28.9	■■■□□ 2.22
CAPN1-222	ENST00000532285	RPS12	P25398	132 aa	Known RBP	28.89	■■■□□ 2.22
CAPN1-222	ENST00000532285	ZBTB12	Q9Y330	459 aa	Predicted RBP	28.89	■■■□□ 2.22
CAPN1-222	ENST00000532285		H7C1D1	291 aa		28.88	■■■□□ 2.21
CAPN1-222	ENST00000532285	IPO8	O15397	1037 aa	Known RBP	28.88	■■■□□ 2.21
CAPN1-222	ENST00000532285	VIL1	P09327	827 aa	Known RBP	28.88	■■■□□ 2.21
CAPN1-222	ENST00000532285	KCNJ4	P48050	445 aa		28.88	■■■□□ 2.21
CAPN1-222	ENST00000532285	CNNM1	Q9NRU3	951 aa		28.88	■■■□□ 2.21
CAPN1-222	ENST00000532285	CNTROB	Q8N137	903 aa		28.87	■■■□□ 2.21
CAPN1-222	ENST00000532285	ANKRD44	Q8N8A2	993 aa		28.87	■■■□□ 2.21
CAPN1-222	ENST00000532285	ITGBL1	O95965	494 aa	Predicted RBP	28.86	■■■□□ 2.21
CAPN1-222	ENST00000532285	MAP1S	Q66K74	1059 aa	Predicted RBP	28.86	■■■□□ 2.21
CAPN1-222	ENST00000532285	MICALL2	Q8IY33	904 aa		28.86	■■■□□ 2.21
CAPN1-222	ENST00000532285	HELB	Q8NG08	1087 aa	Predicted RBP	28.86	■■■□□ 2.21
CAPN1-222	ENST00000532285	COA1	Q9GZY4	146 aa		28.86	■■■□□ 2.21
CAPN1-222	ENST00000532285	PASK	Q96RG2	1323 aa		28.86	■■■□□ 2.21
CAPN1-222	ENST00000532285	TAF5L	O75529	589 aa		28.85	■■■□□ 2.21
CAPN1-222	ENST00000532285	BCAR3	O75815	825 aa		28.85	■■■□□ 2.21
CAPN1-222	ENST00000532285	HTRA3	P83110	453 aa		28.85	■■■□□ 2.21
CAPN1-222	ENST00000532285	TXNRD3	Q86VQ6	643 aa		28.85	■■■□□ 2.21
CAPN1-222	ENST00000532285	DNAJC5G	Q8N7S2	189 aa		28.85	■■■□□ 2.21
CAPN1-222	ENST00000532285	USP17L3	A6NCW0	530 aa		28.83	■■■□□ 2.21
CAPN1-222	ENST00000532285	USP17L4	A6NCW7	530 aa		28.83	■■■□□ 2.21
CAPN1-222	ENST00000532285	UBTFL1	P0CB47	393 aa	Predicted RBP	28.83	■■■□□ 2.21
CAPN1-222	ENST00000532285	INTS3	Q68E01	1043 aa	Known RBP	28.83	■■■□□ 2.21
CAPN1-222	ENST00000532285	USP17L1	Q7RTZ2	530 aa		28.83	■■■□□ 2.21
CAPN1-222	ENST00000532285	HDAC5	Q9UQL6	1122 aa		28.83	■■■□□ 2.21
CAPN1-222	ENST00000532285	SHTN1	A0MZ66	631 aa		28.82	■■■□□ 2.2
CAPN1-222	ENST00000532285	RSBN1L	Q6PCB5	846 aa	Predicted RBP	28.82	■■■□□ 2.2

Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms