RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 RASSF7Q02833 373 aa18.1■□□□□ 0.49
CPSF1-206ENST00000531480 VPS33BQ9H267 617 aa18.1■□□□□ 0.49
CPSF1-206ENST00000531480 LMNB1P20700 586 aa18.09■□□□□ 0.49
CPSF1-206ENST00000531480 C1QTNF8P60827 252 aa18.09■□□□□ 0.49
CPSF1-206ENST00000531480 PTPN12Q05209 780 aaKnown RBP18.09■□□□□ 0.49
CPSF1-206ENST00000531480 MPNDQ8N594 471 aa18.09■□□□□ 0.49
CPSF1-206ENST00000531480 CHMP4BQ9H444 224 aaKnown RBP18.09■□□□□ 0.49
CPSF1-206ENST00000531480 FBXO3Q9UK99 471 aa18.09■□□□□ 0.49
CPSF1-206ENST00000531480 CHMP3Q9Y3E7 222 aa18.09■□□□□ 0.49
CPSF1-206ENST00000531480 TIAM2Q8IVF5 1701 aa18.09■□□□□ 0.49
CPSF1-206ENST00000531480 GPSM2P81274 684 aa18.08■□□□□ 0.48
CPSF1-206ENST00000531480 ZNF594Q96JF6 807 aaPredicted RBP18.08■□□□□ 0.48
CPSF1-206ENST00000531480 MPHOSPH8Q99549 860 aa18.08■□□□□ 0.48
CPSF1-206ENST00000531480 TMX4Q9H1E5 349 aaPredicted RBP18.08■□□□□ 0.48
CPSF1-206ENST00000531480 RIPOR2Q9Y4F9 1068 aa18.08■□□□□ 0.48
CPSF1-206ENST00000531480 XDHP47989 1333 aa18.07■□□□□ 0.48
CPSF1-206ENST00000531480 ZC3H4Q9UPT8 1303 aaKnown RBP18.07■□□□□ 0.48
CPSF1-206ENST00000531480 COL4A5P29400 1685 aa18.07■□□□□ 0.48
CPSF1-206ENST00000531480 POLA2Q14181 598 aa18.07■□□□□ 0.48
CPSF1-206ENST00000531480 DPP8Q6V1X1 898 aaPredicted RBP18.07■□□□□ 0.48
CPSF1-206ENST00000531480 LDHAL6AQ6ZMR3 332 aa18.07■□□□□ 0.48
CPSF1-206ENST00000531480 SUPT20HQ8NEM7 779 aa18.07■□□□□ 0.48
CPSF1-206ENST00000531480 SSH3Q8TE77 659 aa18.07■□□□□ 0.48
CPSF1-206ENST00000531480 COPRSQ9NQ92 184 aa18.07■□□□□ 0.48
CPSF1-206ENST00000531480 POLLQ9UGP5 575 aa18.07■□□□□ 0.48
CPSF1-206ENST00000531480 PNMA6EA0A0J9YXQ4 647 aa18.06■□□□□ 0.48
CPSF1-206ENST00000531480 ATP8B2P98198 1209 aa18.06■□□□□ 0.48
CPSF1-206ENST00000531480 TBC1D16Q8TBP0 767 aa18.06■□□□□ 0.48
CPSF1-206ENST00000531480 NSFL1CQ9UNZ2 370 aaKnown RBP18.06■□□□□ 0.48
CPSF1-206ENST00000531480 SRGAP3O43295 1099 aa18.05■□□□□ 0.48
CPSF1-206ENST00000531480 CIAO1O76071 339 aa18.05■□□□□ 0.48
CPSF1-206ENST00000531480 IARSP41252 1262 aaKnown RBP18.05■□□□□ 0.48
CPSF1-206ENST00000531480 CHRNDQ07001 517 aa18.05■□□□□ 0.48
CPSF1-206ENST00000531480 CEP85Q6P2H3 762 aa18.05■□□□□ 0.48
CPSF1-206ENST00000531480 PUS3Q9BZE2 481 aaKnown RBP18.05■□□□□ 0.48
CPSF1-206ENST00000531480 ANKRD2Q9GZV1 360 aa18.05■□□□□ 0.48
CPSF1-206ENST00000531480 GPBP1L1Q9HC44 474 aaPredicted RBP18.05■□□□□ 0.48
CPSF1-206ENST00000531480 EYA2O00167 538 aa18.04■□□□□ 0.48
CPSF1-206ENST00000531480 ATP2B4P23634 1241 aa18.04■□□□□ 0.48
CPSF1-206ENST00000531480 KIAA2012Q0VF49 1180 aa18.04■□□□□ 0.48
CPSF1-206ENST00000531480 TAF7LQ5H9L4 462 aa18.04■□□□□ 0.48
CPSF1-206ENST00000531480 C9orf131Q5VYM1 1079 aa18.04■□□□□ 0.48
CPSF1-206ENST00000531480 ATG9AQ7Z3C6 839 aa18.04■□□□□ 0.48
CPSF1-206ENST00000531480 VGLL2Q8N8G2 317 aa18.04■□□□□ 0.48
CPSF1-206ENST00000531480 KLHDC4Q8TBB5 520 aa18.04■□□□□ 0.48
CPSF1-206ENST00000531480 C1orf115Q9H7X2 142 aa18.04■□□□□ 0.48
CPSF1-206ENST00000531480 ZNF277Q9NRM2 450 aaPredicted RBP18.04■□□□□ 0.48
CPSF1-206ENST00000531480 LEMD3Q9Y2U8 911 aa18.04■□□□□ 0.48
CPSF1-206ENST00000531480 SUPT16HQ9Y5B9 1047 aaKnown RBP18.04■□□□□ 0.48
CPSF1-206ENST00000531480 MROH5Q6ZUA9 1318 aa18.03■□□□□ 0.48
CPSF1-206ENST00000531480 IRS2Q9Y4H2 1338 aa18.03■□□□□ 0.48
CPSF1-206ENST00000531480 LRRC24Q50LG9 513 aa18.03■□□□□ 0.48
CPSF1-206ENST00000531480 RPAP2Q8IXW5 612 aaPredicted RBP18.03■□□□□ 0.48
CPSF1-206ENST00000531480 RNF181Q9P0P0 153 aa18.03■□□□□ 0.48
CPSF1-206ENST00000531480 ANKIB1Q9P2G1 1089 aa18.03■□□□□ 0.48
CPSF1-206ENST00000531480 GGA1Q9UJY5 639 aa18.03■□□□□ 0.48
CPSF1-206ENST00000531480 C15orf52Q6ZUT6 534 aaKnown RBP18.02■□□□□ 0.48
CPSF1-206ENST00000531480 CNNM1Q9NRU3 951 aa18.02■□□□□ 0.48
CPSF1-206ENST00000531480 MED23Q9ULK4 1368 aa18.02■□□□□ 0.47
CPSF1-206ENST00000531480 PSME4Q14997 1843 aa18.01■□□□□ 0.47
CPSF1-206ENST00000531480 WTIPA6NIX2 430 aaPredicted RBP18.01■□□□□ 0.47
CPSF1-206ENST00000531480 UFL1O94874 794 aa18.01■□□□□ 0.47
CPSF1-206ENST00000531480 SIRT2Q8IXJ6 389 aa18.01■□□□□ 0.47
CPSF1-206ENST00000531480 EYA3Q99504 573 aa18.01■□□□□ 0.47
CPSF1-206ENST00000531480 PA2G4Q9UQ80 394 aaKnown RBP18.01■□□□□ 0.47
CPSF1-206ENST00000531480 NOP58Q9Y2X3 529 aaKnown RBP18.01■□□□□ 0.47
CPSF1-206ENST00000531480 ZNF804BA4D1E1 1349 aa18■□□□□ 0.47
CPSF1-206ENST00000531480 FZD9O00144 591 aa18■□□□□ 0.47
CPSF1-206ENST00000531480 AAMPQ13685 434 aa18■□□□□ 0.47
CPSF1-206ENST00000531480 AOC3Q16853 763 aa18■□□□□ 0.47
CPSF1-206ENST00000531480 WASHC4Q2M389 1173 aa18■□□□□ 0.47
CPSF1-206ENST00000531480 CRBNQ96SW2 442 aa18■□□□□ 0.47
CPSF1-206ENST00000531480 ZNF646O15015 1829 aaPredicted RBP18■□□□□ 0.47
CPSF1-206ENST00000531480 C6orf229H3BNL8 230 aa17.99■□□□□ 0.47
CPSF1-206ENST00000531480 PPIP5K2O43314 1243 aa17.99■□□□□ 0.47
CPSF1-206ENST00000531480 TAF5LO75529 589 aa17.99■□□□□ 0.47
CPSF1-206ENST00000531480 PDE8BO95263 885 aa17.99■□□□□ 0.47
CPSF1-206ENST00000531480 IL15P40933 162 aaPredicted RBP17.99■□□□□ 0.47
CPSF1-206ENST00000531480 UBE4AQ14139 1066 aa17.99■□□□□ 0.47
CPSF1-206ENST00000531480 ARAP2Q8WZ64 1704 aa17.98■□□□□ 0.47
CPSF1-206ENST00000531480 FGFR2P21802 821 aa17.98■□□□□ 0.47
CPSF1-206ENST00000531480 LARGE2Q8N3Y3 721 aa17.98■□□□□ 0.47
CPSF1-206ENST00000531480 HELBQ8NG08 1087 aaPredicted RBP17.98■□□□□ 0.47
CPSF1-206ENST00000531480 SCN9AQ15858 1988 aa17.98■□□□□ 0.47
CPSF1-206ENST00000531480 METTL24Q5JXM2 366 aa17.97■□□□□ 0.47
CPSF1-206ENST00000531480 ZC3H12CQ9C0D7 883 aaKnown RBP17.97■□□□□ 0.47
CPSF1-206ENST00000531480 SIL1Q9H173 461 aa17.97■□□□□ 0.47
CPSF1-206ENST00000531480 SNAP23O00161 211 aa17.96■□□□□ 0.47
CPSF1-206ENST00000531480 TXNRD3Q86VQ6 643 aa17.96■□□□□ 0.47
CPSF1-206ENST00000531480 JDP2Q8WYK2 163 aa17.96■□□□□ 0.47
CPSF1-206ENST00000531480 GPR101Q96P66 508 aaPredicted RBP17.96■□□□□ 0.47
CPSF1-206ENST00000531480 ZNRF3Q9ULT6 936 aa17.96■□□□□ 0.47
CPSF1-206ENST00000531480 WDR90Q96KV7 1748 aa17.95■□□□□ 0.46
CPSF1-206ENST00000531480 YDJCA8MPS7 323 aa17.95■□□□□ 0.46
CPSF1-206ENST00000531480 KLRK1P26718 216 aa17.95■□□□□ 0.46
CPSF1-206ENST00000531480 NIM1KQ8IY84 436 aa17.95■□□□□ 0.46
CPSF1-206ENST00000531480 GLTPD2A6NH11 291 aa17.94■□□□□ 0.46
CPSF1-206ENST00000531480 ZBTB22O15209 634 aa17.94■□□□□ 0.46
CPSF1-206ENST00000531480 HMMRO75330 724 aa17.94■□□□□ 0.46
CPSF1-206ENST00000531480 SASH1O94885 1247 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms