RNA–Protein interactions for RNA: ENST00000530422.1

SCARNA9-201, small Cajal body-specific RNA 9, humanhuman

BASIC

Gene SCARNA9, Length 353 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA9-201ENST00000530422 NOS2P35228 1153 aa9.92□□□□□ -0.82
SCARNA9-201ENST00000530422 MASP1P48740 699 aa9.92□□□□□ -0.82
SCARNA9-201ENST00000530422 WNT7BP56706 349 aa9.92□□□□□ -0.82
SCARNA9-201ENST00000530422 NFX1Q12986 1120 aaKnown RBP9.92□□□□□ -0.82
SCARNA9-201ENST00000530422 RNF20Q5VTR2 975 aa9.92□□□□□ -0.82
SCARNA9-201ENST00000530422 ANKRD23Q86SG2 305 aa9.92□□□□□ -0.82
SCARNA9-201ENST00000530422 NBPF5PQ86XG9 351 aaPredicted RBP9.92□□□□□ -0.82
SCARNA9-201ENST00000530422 SEC16BQ96JE7 1060 aa9.92□□□□□ -0.82
SCARNA9-201ENST00000530422 NAP1L4Q99733 375 aaKnown RBP9.92□□□□□ -0.82
SCARNA9-201ENST00000530422 PAGR1Q9BTK6 254 aa9.92□□□□□ -0.82
SCARNA9-201ENST00000530422 ABCF2Q9UG63 623 aa9.92□□□□□ -0.82
SCARNA9-201ENST00000530422 SYNPO2Q9UMS6 1093 aa9.92□□□□□ -0.82
SCARNA9-201ENST00000530422 PCDHGA11Q9Y5H2 935 aa9.92□□□□□ -0.82
SCARNA9-201ENST00000530422 C11orf95C9JLR9 678 aaPredicted RBP9.91□□□□□ -0.82
SCARNA9-201ENST00000530422 LDHAP00338 332 aaKnown RBP9.91□□□□□ -0.82
SCARNA9-201ENST00000530422 SSR1P43307 286 aaKnown RBP9.91□□□□□ -0.82
SCARNA9-201ENST00000530422 EIF1AXP47813 144 aaKnown RBP9.91□□□□□ -0.82
SCARNA9-201ENST00000530422 EXOSC10Q01780 885 aaKnown RBP9.91□□□□□ -0.82
SCARNA9-201ENST00000530422 PTK2Q05397 1052 aa9.91□□□□□ -0.82
SCARNA9-201ENST00000530422 CALD1Q05682 793 aaKnown RBP9.91□□□□□ -0.82
SCARNA9-201ENST00000530422 VPS72Q15906 364 aa9.91□□□□□ -0.82
SCARNA9-201ENST00000530422 OXLD1Q5BKU9 147 aa9.91□□□□□ -0.82
SCARNA9-201ENST00000530422 HOMER1Q86YM7 354 aa9.91□□□□□ -0.82
SCARNA9-201ENST00000530422 SAMD3Q8N6K7 520 aa9.91□□□□□ -0.82
SCARNA9-201ENST00000530422 PDILTQ8N807 584 aa9.91□□□□□ -0.82
SCARNA9-201ENST00000530422 TSR2Q969E8 191 aaKnown RBP9.91□□□□□ -0.82
SCARNA9-201ENST00000530422 TRIM55Q9BYV6 548 aa9.91□□□□□ -0.82
SCARNA9-201ENST00000530422 RSPH9Q9H1X1 276 aaPredicted RBP9.91□□□□□ -0.82
SCARNA9-201ENST00000530422 F12P00748 615 aaPredicted RBP9.9□□□□□ -0.82
SCARNA9-201ENST00000530422 LMOD3Q0VAK6 560 aa9.9□□□□□ -0.82
SCARNA9-201ENST00000530422 RAB33AQ14088 237 aa9.9□□□□□ -0.82
SCARNA9-201ENST00000530422 LCE2AQ5TA79 106 aaPredicted RBP9.9□□□□□ -0.82
SCARNA9-201ENST00000530422 ANKS3Q6ZW76 656 aa9.9□□□□□ -0.82
SCARNA9-201ENST00000530422 C1orf131Q8NDD1 294 aaKnown RBP9.9□□□□□ -0.82
SCARNA9-201ENST00000530422 CFHR5Q9BXR6 569 aa9.9□□□□□ -0.82
SCARNA9-201ENST00000530422 INO80BQ9C086 356 aaPredicted RBP9.9□□□□□ -0.82
SCARNA9-201ENST00000530422 NIF3L1Q9GZT8 377 aa9.9□□□□□ -0.82
SCARNA9-201ENST00000530422 MAP3K20Q9NYL2 800 aaKnown RBP9.9□□□□□ -0.82
SCARNA9-201ENST00000530422 SFMBT1Q9UHJ3 866 aa9.9□□□□□ -0.82
SCARNA9-201ENST00000530422 MYO15BQ96JP2 1530 aa9.89□□□□□ -0.83
SCARNA9-201ENST00000530422 CBFA2T2O43439 604 aa9.89□□□□□ -0.83
SCARNA9-201ENST00000530422 KLF4O43474 513 aa9.89□□□□□ -0.83
SCARNA9-201ENST00000530422 CCNYL3P0C7X3 344 aa9.89□□□□□ -0.83
SCARNA9-201ENST00000530422 IGFBP4P22692 258 aa9.89□□□□□ -0.83
SCARNA9-201ENST00000530422 ZRSR2Q15696 482 aaKnown RBP9.89□□□□□ -0.83
SCARNA9-201ENST00000530422 GJC2Q5T442 439 aaPredicted RBP9.89□□□□□ -0.83
SCARNA9-201ENST00000530422 WDR75Q8IWA0 830 aaKnown RBP9.89□□□□□ -0.83
SCARNA9-201ENST00000530422 TSEN2Q8NCE0 465 aaKnown RBP9.89□□□□□ -0.83
SCARNA9-201ENST00000530422 CEP63Q96MT8 703 aa9.89□□□□□ -0.83
SCARNA9-201ENST00000530422 KANSL2Q9H9L4 492 aa9.89□□□□□ -0.83
SCARNA9-201ENST00000530422 ATP13A2Q9NQ11 1180 aa9.89□□□□□ -0.83
SCARNA9-201ENST00000530422 CNTN3Q9P232 1028 aa9.89□□□□□ -0.83
SCARNA9-201ENST00000530422 FAM221BA6H8Z2 402 aa9.88□□□□□ -0.83
SCARNA9-201ENST00000530422 IFRD1O00458 451 aaPredicted RBP9.88□□□□□ -0.83
SCARNA9-201ENST00000530422 ALDH1A1P00352 501 aa9.88□□□□□ -0.83
SCARNA9-201ENST00000530422 HCLS1P14317 486 aaPredicted RBP9.88□□□□□ -0.83
SCARNA9-201ENST00000530422 NBPF10Q6P3W6 841 aaKnown RBP9.88□□□□□ -0.83
SCARNA9-201ENST00000530422 RAVER1Q8IY67 606 aaKnown RBP9.88□□□□□ -0.83
SCARNA9-201ENST00000530422 PGBD3Q8N328 593 aa9.88□□□□□ -0.83
SCARNA9-201ENST00000530422 LSM14AQ8ND56 463 aaKnown RBP9.88□□□□□ -0.83
SCARNA9-201ENST00000530422 TRPM4Q8TD43 1214 aa9.88□□□□□ -0.83
SCARNA9-201ENST00000530422 MPHOSPH6Q99547 160 aaKnown RBP9.88□□□□□ -0.83
SCARNA9-201ENST00000530422 OCSTAMPQ9BR26 566 aa9.88□□□□□ -0.83
SCARNA9-201ENST00000530422 USP31Q70CQ4 1352 aa9.88□□□□□ -0.83
SCARNA9-201ENST00000530422 ESYT3A0FGR9 886 aa9.87□□□□□ -0.83
SCARNA9-201ENST00000530422 SIAH2O43255 324 aa9.87□□□□□ -0.83
SCARNA9-201ENST00000530422 EIF4BP23588 611 aaKnown RBP9.87□□□□□ -0.83
SCARNA9-201ENST00000530422 SH3BP2P78314 561 aa9.87□□□□□ -0.83
SCARNA9-201ENST00000530422 PDXDC2PQ6P474 469 aa9.87□□□□□ -0.83
SCARNA9-201ENST00000530422 ZNF512BQ96KM6 892 aaPredicted RBP9.87□□□□□ -0.83
SCARNA9-201ENST00000530422 ESPNB1AK53 854 aa9.86□□□□□ -0.83
SCARNA9-201ENST00000530422 SNRPBP14678 240 aaKnown RBP9.86□□□□□ -0.83
SCARNA9-201ENST00000530422 POU5F1BQ06416 359 aa9.86□□□□□ -0.83
SCARNA9-201ENST00000530422 PTPRNQ16849 979 aa9.86□□□□□ -0.83
SCARNA9-201ENST00000530422 LINC01559Q495D7 138 aa9.86□□□□□ -0.83
SCARNA9-201ENST00000530422 CCDC174Q6PII3 467 aa9.86□□□□□ -0.83
SCARNA9-201ENST00000530422 TREML4Q6UXN2 200 aa9.86□□□□□ -0.83
SCARNA9-201ENST00000530422 EHBP1Q8NDI1 1231 aa9.86□□□□□ -0.83
SCARNA9-201ENST00000530422 ATL2Q8NHH9 583 aa9.86□□□□□ -0.83
SCARNA9-201ENST00000530422 FEZ1Q99689 392 aa9.86□□□□□ -0.83
SCARNA9-201ENST00000530422 UNC93B1Q9H1C4 597 aa9.86□□□□□ -0.83
SCARNA9-201ENST00000530422 EVA1BQ9NVM1 165 aa9.86□□□□□ -0.83
SCARNA9-201ENST00000530422 SPG7Q9UQ90 795 aa9.86□□□□□ -0.83
SCARNA9-201ENST00000530422 FGAP02671 866 aa9.85□□□□□ -0.83
SCARNA9-201ENST00000530422 KRT18P05783 430 aaKnown RBP9.85□□□□□ -0.83
SCARNA9-201ENST00000530422 CD53P19397 219 aa9.85□□□□□ -0.83
SCARNA9-201ENST00000530422 NFE2Q16621 373 aaPredicted RBP9.85□□□□□ -0.83
SCARNA9-201ENST00000530422 BRDTQ58F21 947 aaPredicted RBP9.85□□□□□ -0.83
SCARNA9-201ENST00000530422 C16orf46Q6P387 395 aa9.85□□□□□ -0.83
SCARNA9-201ENST00000530422 KRT26Q7Z3Y9 468 aa9.85□□□□□ -0.83
SCARNA9-201ENST00000530422 GPKOWQ92917 476 aaPredicted RBP eCLIP9.85□□□□□ -0.83
SCARNA9-201ENST00000530422 IFT122Q9HBG6 1241 aa9.85□□□□□ -0.83
SCARNA9-201ENST00000530422 AVENQ9NQS1 362 aaPredicted RBP9.85□□□□□ -0.83
SCARNA9-201ENST00000530422 TMEM260Q9NX78 707 aa9.85□□□□□ -0.83
SCARNA9-201ENST00000530422 SYNRGQ9UMZ2 1314 aa9.84□□□□□ -0.83
SCARNA9-201ENST00000530422 TSPAN6O43657 245 aa9.84□□□□□ -0.83
SCARNA9-201ENST00000530422 ETFBP38117 255 aa9.84□□□□□ -0.83
SCARNA9-201ENST00000530422 PEX19P40855 299 aa9.84□□□□□ -0.83
SCARNA9-201ENST00000530422 C16orf86Q6ZW13 317 aa9.84□□□□□ -0.83
SCARNA9-201ENST00000530422 RPAINQ86UA6 219 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms