RNA–Protein interactions for RNA: ENST00000529307.1

CAPRIN1-207, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CAPRIN1, Length 2,266 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-207ENST00000529307 BCL11BQ9C0K0 894 aaPredicted RBP20.1■□□□□ 0.81
CAPRIN1-207ENST00000529307 FSD1Q9BTV5 496 aa20.09■□□□□ 0.81
CAPRIN1-207ENST00000529307 LY75O60449 1722 aa20.09■□□□□ 0.81
CAPRIN1-207ENST00000529307 RAD50Q92878 1312 aa20.09■□□□□ 0.81
CAPRIN1-207ENST00000529307 DDX11L8A8MPP1 907 aa20.09■□□□□ 0.81
CAPRIN1-207ENST00000529307 GNPATO15228 680 aa20.09■□□□□ 0.81
CAPRIN1-207ENST00000529307 NMIQ13287 307 aaPredicted RBP20.09■□□□□ 0.81
CAPRIN1-207ENST00000529307 LDHAL6AQ6ZMR3 332 aa20.09■□□□□ 0.81
CAPRIN1-207ENST00000529307 AK7Q96M32 723 aa20.09■□□□□ 0.81
CAPRIN1-207ENST00000529307 ZNF652Q9Y2D9 606 aa20.09■□□□□ 0.81
CAPRIN1-207ENST00000529307 ADORA1P30542 326 aa20.08■□□□□ 0.81
CAPRIN1-207ENST00000529307 ZSCAN30Q86W11 494 aa20.08■□□□□ 0.81
CAPRIN1-207ENST00000529307 DNAJC2Q99543 621 aaKnown RBP20.08■□□□□ 0.81
CAPRIN1-207ENST00000529307 FAM13BQ9NYF5 915 aa20.08■□□□□ 0.81
CAPRIN1-207ENST00000529307 SRP68Q9UHB9 627 aaKnown RBP20.08■□□□□ 0.81
CAPRIN1-207ENST00000529307 EPB41L2O43491 1005 aaKnown RBP20.07■□□□□ 0.8
CAPRIN1-207ENST00000529307 CHMP5Q9NZZ3 219 aa20.07■□□□□ 0.8
CAPRIN1-207ENST00000529307 DDX60Q8IY21 1712 aaKnown RBP20.07■□□□□ 0.8
CAPRIN1-207ENST00000529307 A0A0D9SFI3 127 aa20.07■□□□□ 0.8
CAPRIN1-207ENST00000529307 K7ELQ4 463 aaPredicted RBP20.07■□□□□ 0.8
CAPRIN1-207ENST00000529307 CHGBP05060 677 aa20.07■□□□□ 0.8
CAPRIN1-207ENST00000529307 HSPA4P34932 840 aa20.07■□□□□ 0.8
CAPRIN1-207ENST00000529307 PTH1RQ03431 593 aa20.07■□□□□ 0.8
CAPRIN1-207ENST00000529307 BBXQ8WY36 941 aaPredicted RBP20.07■□□□□ 0.8
CAPRIN1-207ENST00000529307 LRRC4BQ9NT99 713 aa20.07■□□□□ 0.8
CAPRIN1-207ENST00000529307 USPL1Q5W0Q7 1092 aa20.06■□□□□ 0.8
CAPRIN1-207ENST00000529307 RUFY2Q8WXA3 655 aa20.06■□□□□ 0.8
CAPRIN1-207ENST00000529307 IL17RAQ96F46 866 aa20.06■□□□□ 0.8
CAPRIN1-207ENST00000529307 SEC31BQ9NQW1 1179 aa20.06■□□□□ 0.8
CAPRIN1-207ENST00000529307 DMTNQ08495 405 aa20.06■□□□□ 0.8
CAPRIN1-207ENST00000529307 TBC1D9BQ66K14 1250 aa20.06■□□□□ 0.8
CAPRIN1-207ENST00000529307 VGLL2Q8N8G2 317 aa20.06■□□□□ 0.8
CAPRIN1-207ENST00000529307 NARFQ9UHQ1 456 aa20.06■□□□□ 0.8
CAPRIN1-207ENST00000529307 TAF1LQ8IZX4 1826 aa20.05■□□□□ 0.8
CAPRIN1-207ENST00000529307 SCN7AQ01118 1682 aa20.05■□□□□ 0.8
CAPRIN1-207ENST00000529307 MCCP23508 829 aa20.05■□□□□ 0.8
CAPRIN1-207ENST00000529307 CCDC173Q0VFZ6 552 aa20.05■□□□□ 0.8
CAPRIN1-207ENST00000529307 METTL24Q5JXM2 366 aa20.05■□□□□ 0.8
CAPRIN1-207ENST00000529307 DDX46Q7L014 1031 aaKnown RBP20.05■□□□□ 0.8
CAPRIN1-207ENST00000529307 XAGE2Q96GT9 111 aa20.05■□□□□ 0.8
CAPRIN1-207ENST00000529307 CNNM1Q9NRU3 951 aa20.05■□□□□ 0.8
CAPRIN1-207ENST00000529307 LRP5O75197 1615 aa20.05■□□□□ 0.8
CAPRIN1-207ENST00000529307 HIP1O00291 1037 aa20.05■□□□□ 0.8
CAPRIN1-207ENST00000529307 ANAPC15P60006 121 aa20.05■□□□□ 0.8
CAPRIN1-207ENST00000529307 BICDL1Q6ZP65 573 aa20.05■□□□□ 0.8
CAPRIN1-207ENST00000529307 KRT27Q7Z3Y8 459 aa20.05■□□□□ 0.8
CAPRIN1-207ENST00000529307 SNRKQ9NRH2 765 aa20.05■□□□□ 0.8
CAPRIN1-207ENST00000529307 AKAP2Q9Y2D5 859 aa20.05■□□□□ 0.8
CAPRIN1-207ENST00000529307 BRWD3Q6RI45 1802 aa20.05■□□□□ 0.8
CAPRIN1-207ENST00000529307 ERFEQ4G0M1 354 aa20.04■□□□□ 0.8
CAPRIN1-207ENST00000529307 ZHX1Q9UKY1 873 aaPredicted RBP20.04■□□□□ 0.8
CAPRIN1-207ENST00000529307 C3orf67Q6ZVT6 689 aa20.04■□□□□ 0.8
CAPRIN1-207ENST00000529307 ARHGEF1Q92888 912 aaKnown RBP20.04■□□□□ 0.8
CAPRIN1-207ENST00000529307 PPP1R9BQ96SB3 815 aa20.04■□□□□ 0.8
CAPRIN1-207ENST00000529307 RTCBQ9Y3I0 505 aaKnown RBP20.04■□□□□ 0.8
CAPRIN1-207ENST00000529307 DDIT3P35638 169 aa20.03■□□□□ 0.8
CAPRIN1-207ENST00000529307 RASEFQ8IZ41 740 aa20.03■□□□□ 0.8
CAPRIN1-207ENST00000529307 GOLIM4O00461 696 aa20.02■□□□□ 0.8
CAPRIN1-207ENST00000529307 RGL2O15211 777 aa20.02■□□□□ 0.8
CAPRIN1-207ENST00000529307 GTF2E1P29083 439 aaPredicted RBP20.02■□□□□ 0.8
CAPRIN1-207ENST00000529307 ATP2B3Q16720 1220 aa20.02■□□□□ 0.8
CAPRIN1-207ENST00000529307 ZNF589Q86UQ0 364 aaPredicted RBP20.02■□□□□ 0.8
CAPRIN1-207ENST00000529307 C4BP0C0L5 1744 aa20.02■□□□□ 0.8
CAPRIN1-207ENST00000529307 MED23Q9ULK4 1368 aa20.02■□□□□ 0.8
CAPRIN1-207ENST00000529307 COL4A1P02462 1669 aa20.02■□□□□ 0.8
CAPRIN1-207ENST00000529307 FAM196AQ6ZSG2 479 aa20.02■□□□□ 0.8
CAPRIN1-207ENST00000529307 PAG1Q9NWQ8 432 aa20.02■□□□□ 0.8
CAPRIN1-207ENST00000529307 LAMB2P55268 1798 aa20.02■□□□□ 0.79
CAPRIN1-207ENST00000529307 IFIT1P09914 478 aaKnown RBP20.01■□□□□ 0.79
CAPRIN1-207ENST00000529307 MSNP26038 577 aaKnown RBP20.01■□□□□ 0.79
CAPRIN1-207ENST00000529307 NEK4P51957 841 aa20.01■□□□□ 0.79
CAPRIN1-207ENST00000529307 KBTBD3Q8NAB2 608 aa20.01■□□□□ 0.79
CAPRIN1-207ENST00000529307 SNX14Q9Y5W7 946 aa20.01■□□□□ 0.79
CAPRIN1-207ENST00000529307 CCDC171Q6TFL3 1326 aa20.01■□□□□ 0.79
CAPRIN1-207ENST00000529307 PDE8BO95263 885 aa20.01■□□□□ 0.79
CAPRIN1-207ENST00000529307 SCARF1Q14162 830 aa20.01■□□□□ 0.79
CAPRIN1-207ENST00000529307 CCDC152Q4G0S7 254 aa20.01■□□□□ 0.79
CAPRIN1-207ENST00000529307 HELBQ8NG08 1087 aaPredicted RBP20.01■□□□□ 0.79
CAPRIN1-207ENST00000529307 FOXD4L1Q9NU39 408 aa20.01■□□□□ 0.79
CAPRIN1-207ENST00000529307 RFX7Q2KHR2 1363 aa20■□□□□ 0.79
CAPRIN1-207ENST00000529307 RTL9Q8NET4 1388 aa20■□□□□ 0.79
CAPRIN1-207ENST00000529307 ST18O60284 1047 aa20■□□□□ 0.79
CAPRIN1-207ENST00000529307 TRIM37O94972 964 aa20■□□□□ 0.79
CAPRIN1-207ENST00000529307 SLFNL1Q499Z3 407 aa20■□□□□ 0.79
CAPRIN1-207ENST00000529307 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20■□□□□ 0.79
CAPRIN1-207ENST00000529307 ABCC12Q96J65 1359 aa20■□□□□ 0.79
CAPRIN1-207ENST00000529307 ZPR1O75312 459 aa20■□□□□ 0.79
CAPRIN1-207ENST00000529307 PHF14O94880 888 aa20■□□□□ 0.79
CAPRIN1-207ENST00000529307 SEC62Q99442 399 aaKnown RBP20■□□□□ 0.79
CAPRIN1-207ENST00000529307 UPF3BQ9BZI7 483 aaKnown RBP20■□□□□ 0.79
CAPRIN1-207ENST00000529307 CCDC158Q5M9N0 1113 aa19.99■□□□□ 0.79
CAPRIN1-207ENST00000529307 TTC39AQ5SRH9 613 aa19.99■□□□□ 0.79
CAPRIN1-207ENST00000529307 GORABQ5T7V8 394 aa19.99■□□□□ 0.79
CAPRIN1-207ENST00000529307 SNAP23O00161 211 aa19.99■□□□□ 0.79
CAPRIN1-207ENST00000529307 DYNC1I1O14576 645 aa19.99■□□□□ 0.79
CAPRIN1-207ENST00000529307 MAP4K1Q92918 833 aa19.99■□□□□ 0.79
CAPRIN1-207ENST00000529307 NECTIN1Q15223 517 aa19.98■□□□□ 0.79
CAPRIN1-207ENST00000529307 PI16Q6UXB8 463 aa19.98■□□□□ 0.79
CAPRIN1-207ENST00000529307 MROH5Q6ZUA9 1318 aa19.98■□□□□ 0.79
CAPRIN1-207ENST00000529307 HSP90B1P14625 803 aaKnown RBP19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms