RNA–Protein interactions for RNA: ENST00000528999.5

PUF60-213, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 3

Gene PUF60, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-213ENST00000528999 CCDC83Q8IWF9 413 aa12.72□□□□□ -0.37
PUF60-213ENST00000528999 MTMR6Q9Y217 621 aa12.72□□□□□ -0.37
PUF60-213ENST00000528999 RIPOR2Q9Y4F9 1068 aa12.72□□□□□ -0.37
PUF60-213ENST00000528999 ANKRD18BA2A2Z9 1011 aa12.71□□□□□ -0.37
PUF60-213ENST00000528999 GOLIM4O00461 696 aa12.71□□□□□ -0.37
PUF60-213ENST00000528999 PDE8AO60658 829 aa12.71□□□□□ -0.37
PUF60-213ENST00000528999 TOB2Q14106 344 aaPredicted RBP12.71□□□□□ -0.37
PUF60-213ENST00000528999 GORABQ5T7V8 394 aa12.71□□□□□ -0.37
PUF60-213ENST00000528999 LARP1BQ659C4 914 aaKnown RBP12.71□□□□□ -0.37
PUF60-213ENST00000528999 DHX32Q7L7V1 743 aaKnown RBP12.71□□□□□ -0.37
PUF60-213ENST00000528999 ZNF34Q8IZ26 560 aa12.71□□□□□ -0.37
PUF60-213ENST00000528999 RGS22Q8NE09 1264 aa12.71□□□□□ -0.37
PUF60-213ENST00000528999 TTLL11Q8NHH1 800 aa12.71□□□□□ -0.37
PUF60-213ENST00000528999 KIF3AQ9Y496 699 aa12.71□□□□□ -0.37
PUF60-213ENST00000528999 CPA1P15085 419 aa12.7□□□□□ -0.38
PUF60-213ENST00000528999 TTF1Q15361 905 aaPredicted RBP12.7□□□□□ -0.38
PUF60-213ENST00000528999 UVSSAQ2YD98 709 aa12.7□□□□□ -0.38
PUF60-213ENST00000528999 TTC39AQ5SRH9 613 aa12.7□□□□□ -0.38
PUF60-213ENST00000528999 BARGINQ6ZT62 677 aa12.7□□□□□ -0.38
PUF60-213ENST00000528999 DDX46Q7L014 1031 aaKnown RBP12.7□□□□□ -0.38
PUF60-213ENST00000528999 FAM184AQ8NB25 1140 aa12.7□□□□□ -0.38
PUF60-213ENST00000528999 TRIM44Q96DX7 344 aaPredicted RBP12.7□□□□□ -0.38
PUF60-213ENST00000528999 EDC3Q96F86 508 aaKnown RBP12.7□□□□□ -0.38
PUF60-213ENST00000528999 XAGE2Q96GT9 111 aa12.7□□□□□ -0.38
PUF60-213ENST00000528999 AGXT2Q9BYV1 514 aa12.7□□□□□ -0.38
PUF60-213ENST00000528999 PANK2Q9BZ23 570 aa12.7□□□□□ -0.38
PUF60-213ENST00000528999 TMEM63CQ9P1W3 806 aa12.7□□□□□ -0.38
PUF60-213ENST00000528999 ELP1O95163 1332 aa12.69□□□□□ -0.38
PUF60-213ENST00000528999 SPATA31A1Q5TZJ5 1347 aa12.69□□□□□ -0.38
PUF60-213ENST00000528999 LARGE1O95461 756 aa12.69□□□□□ -0.38
PUF60-213ENST00000528999 CYP21A2P08686 494 aa12.69□□□□□ -0.38
PUF60-213ENST00000528999 UQCRFS1P1P0C7P4 283 aa12.69□□□□□ -0.38
PUF60-213ENST00000528999 EIF5P55010 431 aaKnown RBP12.69□□□□□ -0.38
PUF60-213ENST00000528999 CTSWP56202 376 aa12.69□□□□□ -0.38
PUF60-213ENST00000528999 EXOSC10Q01780 885 aaKnown RBP12.69□□□□□ -0.38
PUF60-213ENST00000528999 PARP10Q53GL7 1025 aa12.69□□□□□ -0.38
PUF60-213ENST00000528999 SMARCC1Q92922 1105 aaPredicted RBP12.69□□□□□ -0.38
PUF60-213ENST00000528999 FAM89AQ96GI7 184 aa12.69□□□□□ -0.38
PUF60-213ENST00000528999 ZNF594Q96JF6 807 aaPredicted RBP12.69□□□□□ -0.38
PUF60-213ENST00000528999 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.69□□□□□ -0.388e-8■■■■□ 25
PUF60-213ENST00000528999 MROH5Q6ZUA9 1318 aa12.68□□□□□ -0.38
PUF60-213ENST00000528999 WDR19Q8NEZ3 1342 aa12.68□□□□□ -0.38
PUF60-213ENST00000528999 IRS4O14654 1257 aaPredicted RBP12.68□□□□□ -0.38
PUF60-213ENST00000528999 PFKFB2O60825 505 aa12.68□□□□□ -0.38
PUF60-213ENST00000528999 HSPD1P10809 573 aaKnown RBP12.68□□□□□ -0.38
PUF60-213ENST00000528999 PRIM1P49642 420 aaKnown RBP12.68□□□□□ -0.38
PUF60-213ENST00000528999 EVCP57679 992 aa12.68□□□□□ -0.38
PUF60-213ENST00000528999 HMGN5P82970 282 aaKnown RBP12.68□□□□□ -0.38
PUF60-213ENST00000528999 ST3GAL1Q11201 340 aa12.68□□□□□ -0.38
PUF60-213ENST00000528999 DDB1Q16531 1140 aa12.68□□□□□ -0.38
PUF60-213ENST00000528999 CCDC183Q5T5S1 534 aa12.68□□□□□ -0.38
PUF60-213ENST00000528999 FOXD4L5Q5VV16 416 aaPredicted RBP12.68□□□□□ -0.38
PUF60-213ENST00000528999 ATL3Q6DD88 541 aa12.68□□□□□ -0.38
PUF60-213ENST00000528999 LDHAL6AQ6ZMR3 332 aa12.68□□□□□ -0.38
PUF60-213ENST00000528999 FOXD4L4Q8WXT5 416 aaPredicted RBP12.68□□□□□ -0.38
PUF60-213ENST00000528999 GTF3C6Q969F1 213 aa12.68□□□□□ -0.38
PUF60-213ENST00000528999 ZNF274Q96GC6 653 aaPredicted RBP12.68□□□□□ -0.38
PUF60-213ENST00000528999 SLC4A9Q96Q91 983 aa12.68□□□□□ -0.38
PUF60-213ENST00000528999 PUS3Q9BZE2 481 aaKnown RBP12.68□□□□□ -0.38
PUF60-213ENST00000528999 SCAND2PQ9GZW5 306 aaPredicted RBP12.68□□□□□ -0.38
PUF60-213ENST00000528999 ZSCAN16Q9H4T2 348 aaPredicted RBP12.68□□□□□ -0.38
PUF60-213ENST00000528999 ITGB4P16144 1822 aa12.67□□□□□ -0.38
PUF60-213ENST00000528999 ITGA6P23229 1130 aa12.67□□□□□ -0.38
PUF60-213ENST00000528999 KRT85P78386 507 aa12.67□□□□□ -0.38
PUF60-213ENST00000528999 HLFQ16534 295 aa12.67□□□□□ -0.38
PUF60-213ENST00000528999 ATP2B3Q16720 1220 aa12.67□□□□□ -0.38
PUF60-213ENST00000528999 METTL24Q5JXM2 366 aa12.67□□□□□ -0.38
PUF60-213ENST00000528999 Q6ZUG5 572 aa12.67□□□□□ -0.38
PUF60-213ENST00000528999 DZIP3Q86Y13 1208 aaKnown RBP12.67□□□□□ -0.38
PUF60-213ENST00000528999 NECAB1Q8N987 351 aa12.67□□□□□ -0.38
PUF60-213ENST00000528999 APPBP2Q92624 585 aa12.67□□□□□ -0.38
PUF60-213ENST00000528999 TSPY26PQ9H489 355 aa12.67□□□□□ -0.38
PUF60-213ENST00000528999 TRMT112Q9UI30 125 aaKnown RBP12.67□□□□□ -0.38
PUF60-213ENST00000528999 RTL9Q8NET4 1388 aa12.67□□□□□ -0.38
PUF60-213ENST00000528999 ROBO1Q9Y6N7 1651 aa12.67□□□□□ -0.38
PUF60-213ENST00000528999 PDE8BO95263 885 aa12.66□□□□□ -0.38
PUF60-213ENST00000528999 CLCN1P35523 988 aa12.66□□□□□ -0.38
PUF60-213ENST00000528999 UBE3CQ15386 1083 aa12.66□□□□□ -0.38
PUF60-213ENST00000528999 SMARCC2Q8TAQ2 1214 aa12.66□□□□□ -0.38
PUF60-213ENST00000528999 PDLIM2Q96JY6 352 aa12.66□□□□□ -0.38
PUF60-213ENST00000528999 SEC62Q99442 399 aaKnown RBP12.66□□□□□ -0.38
PUF60-213ENST00000528999 RBSNQ9H1K0 784 aa12.66□□□□□ -0.38
PUF60-213ENST00000528999 CCDC87Q9NVE4 849 aa12.66□□□□□ -0.38
PUF60-213ENST00000528999 CNPY2Q9Y2B0 182 aa12.66□□□□□ -0.38
PUF60-213ENST00000528999 ZBTB1Q9Y2K1 713 aa12.66□□□□□ -0.38
PUF60-213ENST00000528999 COL16A1Q07092 1604 aaPredicted RBP12.66□□□□□ -0.38
PUF60-213ENST00000528999 MAST3O60307 1309 aa12.65□□□□□ -0.38
PUF60-213ENST00000528999 FGD1P98174 961 aa12.65□□□□□ -0.38
PUF60-213ENST00000528999 FKBP4Q02790 459 aaKnown RBP eCLIP12.65□□□□□ -0.38
PUF60-213ENST00000528999 IMMTQ16891 758 aaKnown RBP12.65□□□□□ -0.38
PUF60-213ENST00000528999 NAA16Q6N069 864 aaPredicted RBP12.65□□□□□ -0.38
PUF60-213ENST00000528999 INTS5Q6P9B9 1019 aaKnown RBP12.65□□□□□ -0.38
PUF60-213ENST00000528999 CCDC129Q6ZRS4 1044 aa12.65□□□□□ -0.38
PUF60-213ENST00000528999 VGLL2Q8N8G2 317 aa12.65□□□□□ -0.38
PUF60-213ENST00000528999 LPIN2Q92539 896 aa12.65□□□□□ -0.38
PUF60-213ENST00000528999 LARP6Q9BRS8 491 aaKnown RBP12.65□□□□□ -0.38
PUF60-213ENST00000528999 GREM2Q9H772 168 aa12.65□□□□□ -0.38
PUF60-213ENST00000528999 CNNM1Q9NRU3 951 aa12.65□□□□□ -0.38
PUF60-213ENST00000528999 RBM27Q9P2N5 1060 aaKnown RBP12.65□□□□□ -0.38
PUF60-213ENST00000528999 NSFL1CQ9UNZ2 370 aaKnown RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms