RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 CWF19L2Q2TBE0 894 aaKnown RBP12.2□□□□□ -0.46
CHD7-208ENST00000528280 EAPPQ56P03 285 aaPredicted RBP12.2□□□□□ -0.46
CHD7-208ENST00000528280 PLA2G12BQ9BX93 195 aa12.2□□□□□ -0.46
CHD7-208ENST00000528280 SPINK5Q9NQ38 1064 aaPredicted RBP12.2□□□□□ -0.46
CHD7-208ENST00000528280 RASSF10A6NK89 507 aa12.19□□□□□ -0.46
CHD7-208ENST00000528280 ATP2B4P23634 1241 aa12.19□□□□□ -0.46
CHD7-208ENST00000528280 GPSM2P81274 684 aa12.19□□□□□ -0.46
CHD7-208ENST00000528280 DEFB115Q30KQ5 88 aa12.19□□□□□ -0.46
CHD7-208ENST00000528280 UBE3BQ7Z3V4 1068 aa12.19□□□□□ -0.46
CHD7-208ENST00000528280 TBC1D16Q8TBP0 767 aa12.19□□□□□ -0.46
CHD7-208ENST00000528280 JARID2Q92833 1246 aaPredicted RBP12.19□□□□□ -0.46
CHD7-208ENST00000528280 BCL2L13Q9BXK5 485 aa12.19□□□□□ -0.46
CHD7-208ENST00000528280 SEC31BQ9NQW1 1179 aa12.19□□□□□ -0.46
CHD7-208ENST00000528280 BSDC1Q9NW68 430 aaPredicted RBP12.19□□□□□ -0.46
CHD7-208ENST00000528280 GGA1Q9UJY5 639 aa12.19□□□□□ -0.46
CHD7-208ENST00000528280 RTL9Q8NET4 1388 aa12.18□□□□□ -0.46
CHD7-208ENST00000528280 LAMB2P55268 1798 aa12.18□□□□□ -0.46
CHD7-208ENST00000528280 DDX60Q8IY21 1712 aaKnown RBP12.18□□□□□ -0.46
CHD7-208ENST00000528280 H7C1D1 291 aa12.18□□□□□ -0.46
CHD7-208ENST00000528280 ALDH1L1O75891 902 aa12.18□□□□□ -0.46
CHD7-208ENST00000528280 CSF1RP07333 972 aa12.18□□□□□ -0.46
CHD7-208ENST00000528280 IGHMBP2P38935 993 aaKnown RBP12.18□□□□□ -0.46
CHD7-208ENST00000528280 SLFN5Q08AF3 891 aa12.18□□□□□ -0.46
CHD7-208ENST00000528280 CNTROBQ8N137 903 aa12.18□□□□□ -0.46
CHD7-208ENST00000528280 DPF2Q92785 391 aa12.18□□□□□ -0.46
CHD7-208ENST00000528280 ADARB2Q9NS39 739 aaKnown RBP12.18□□□□□ -0.46
CHD7-208ENST00000528280 GPRC5DQ9NZD1 345 aa12.18□□□□□ -0.46
CHD7-208ENST00000528280 POLLQ9UGP5 575 aa12.18□□□□□ -0.46
CHD7-208ENST00000528280 THSD7BQ9C0I4 1608 aa12.18□□□□□ -0.46
CHD7-208ENST00000528280 XDHP47989 1333 aa12.17□□□□□ -0.46
CHD7-208ENST00000528280 WDR33Q9C0J8 1336 aaKnown RBP12.17□□□□□ -0.46
CHD7-208ENST00000528280 RIMBP2O15034 1052 aa12.17□□□□□ -0.46
CHD7-208ENST00000528280 CT47B1P0C2W7 299 aaPredicted RBP12.17□□□□□ -0.46
CHD7-208ENST00000528280 RPS12P25398 132 aaKnown RBP12.17□□□□□ -0.46
CHD7-208ENST00000528280 SCNN1DP51172 638 aa12.17□□□□□ -0.46
CHD7-208ENST00000528280 BEND3Q5T5X7 828 aa12.17□□□□□ -0.46
CHD7-208ENST00000528280 ZC3H15Q8WU90 426 aaKnown RBP12.17□□□□□ -0.46
CHD7-208ENST00000528280 MPHOSPH8Q99549 860 aa12.17□□□□□ -0.46
CHD7-208ENST00000528280 ANKRD2Q9GZV1 360 aa12.17□□□□□ -0.46
CHD7-208ENST00000528280 C9orf78Q9NZ63 289 aaPredicted RBP12.17□□□□□ -0.46
CHD7-208ENST00000528280 ADAMTSL1Q8N6G6 1762 aa12.17□□□□□ -0.46
CHD7-208ENST00000528280 RAD17O75943 681 aa12.16□□□□□ -0.46
CHD7-208ENST00000528280 UFL1O94874 794 aa12.16□□□□□ -0.46
CHD7-208ENST00000528280 EPS15P42566 896 aa12.16□□□□□ -0.46
CHD7-208ENST00000528280 ALDH1L2Q3SY69 923 aa12.16□□□□□ -0.46
CHD7-208ENST00000528280 CCDC85AQ96PX6 553 aaPredicted RBP12.16□□□□□ -0.46
CHD7-208ENST00000528280 SRCIN1Q9C0H9 1055 aa12.16□□□□□ -0.46
CHD7-208ENST00000528280 GREM2Q9H772 168 aa12.16□□□□□ -0.46
CHD7-208ENST00000528280 LEMD3Q9Y2U8 911 aa12.16□□□□□ -0.46
CHD7-208ENST00000528280 PTPRCP08575 1304 aa12.15□□□□□ -0.46
CHD7-208ENST00000528280 ANKRD18BA2A2Z9 1011 aa12.15□□□□□ -0.46
CHD7-208ENST00000528280 GMPSP49915 693 aaPredicted RBP12.15□□□□□ -0.46
CHD7-208ENST00000528280 CASP7P55210 303 aa12.15□□□□□ -0.46
CHD7-208ENST00000528280 IFIT5Q13325 482 aaKnown RBP12.15□□□□□ -0.46
CHD7-208ENST00000528280 PODNQ7Z5L7 613 aa12.15□□□□□ -0.46
CHD7-208ENST00000528280 CNOT7Q9UIV1 285 aaKnown RBP12.15□□□□□ -0.46
CHD7-208ENST00000528280 MINPP1Q9UNW1 487 aa12.15□□□□□ -0.46
CHD7-208ENST00000528280 TRPM7Q96QT4 1865 aa12.14□□□□□ -0.47
CHD7-208ENST00000528280 F6X3S4 739 aa12.14□□□□□ -0.47
CHD7-208ENST00000528280 GRM8O00222 908 aa12.14□□□□□ -0.47
CHD7-208ENST00000528280 ECE2O60344 883 aa12.14□□□□□ -0.47
CHD7-208ENST00000528280 ITGA6P23229 1130 aa12.14□□□□□ -0.47
CHD7-208ENST00000528280 MMP14P50281 582 aa12.14□□□□□ -0.47
CHD7-208ENST00000528280 DOK7Q18PE1 504 aa12.14□□□□□ -0.47
CHD7-208ENST00000528280 CCDC57Q2TAC2 916 aa12.14□□□□□ -0.47
CHD7-208ENST00000528280 SLC4A10Q6U841 1118 aa12.14□□□□□ -0.47
CHD7-208ENST00000528280 TRMT2AQ8IZ69 625 aaKnown RBP12.14□□□□□ -0.47
CHD7-208ENST00000528280 MRPL50Q8N5N7 158 aaKnown RBP12.14□□□□□ -0.47
CHD7-208ENST00000528280 DBNDD1Q9H9R9 158 aa12.14□□□□□ -0.47
CHD7-208ENST00000528280 PGAP2Q9UHJ9 254 aa12.14□□□□□ -0.47
CHD7-208ENST00000528280 TAF1P21675 1872 aa12.13□□□□□ -0.47
CHD7-208ENST00000528280 YDJCA8MPS7 323 aa12.13□□□□□ -0.47
CHD7-208ENST00000528280 PSMD14O00487 310 aa12.13□□□□□ -0.47
CHD7-208ENST00000528280 VIL1P09327 827 aaKnown RBP12.13□□□□□ -0.47
CHD7-208ENST00000528280 CCT4P50991 539 aaKnown RBP12.13□□□□□ -0.47
CHD7-208ENST00000528280 MAP1SQ66K74 1059 aaPredicted RBP12.13□□□□□ -0.47
CHD7-208ENST00000528280 SLC51AQ86UW1 340 aa12.13□□□□□ -0.47
CHD7-208ENST00000528280 MCOLN1Q9GZU1 580 aa12.13□□□□□ -0.47
CHD7-208ENST00000528280 COL4A5P29400 1685 aa12.13□□□□□ -0.47
CHD7-208ENST00000528280 LRRC37AA6NMS7 1700 aa12.12□□□□□ -0.47
CHD7-208ENST00000528280 FOXO4P98177 505 aa12.12□□□□□ -0.47
CHD7-208ENST00000528280 DIEXFQ68CQ4 756 aaKnown RBP12.12□□□□□ -0.47
CHD7-208ENST00000528280 AGBL3Q8NEM8 1001 aa12.12□□□□□ -0.47
CHD7-208ENST00000528280 BEGAINQ9BUH8 593 aa12.12□□□□□ -0.47
CHD7-208ENST00000528280 HDAC5Q9UQL6 1122 aa12.12□□□□□ -0.47
CHD7-208ENST00000528280 LTBP1Q14766 1721 aa12.11□□□□□ -0.47
CHD7-208ENST00000528280 USP17L3A6NCW0 530 aa12.11□□□□□ -0.47
CHD7-208ENST00000528280 USP17L4A6NCW7 530 aa12.11□□□□□ -0.47
CHD7-208ENST00000528280 KCNJ4P48050 445 aa12.11□□□□□ -0.47
CHD7-208ENST00000528280 TAF7LQ5H9L4 462 aa12.11□□□□□ -0.47
CHD7-208ENST00000528280 LMBR1LQ6UX01 489 aa12.11□□□□□ -0.47
CHD7-208ENST00000528280 CDC37L1Q7L3B6 337 aa12.11□□□□□ -0.47
CHD7-208ENST00000528280 USP17L1Q7RTZ2 530 aa12.11□□□□□ -0.47
CHD7-208ENST00000528280 MICALL2Q8IY33 904 aa12.11□□□□□ -0.47
CHD7-208ENST00000528280 SSH1Q8WYL5 1049 aa12.11□□□□□ -0.47
CHD7-208ENST00000528280 COA1Q9GZY4 146 aa12.11□□□□□ -0.47
CHD7-208ENST00000528280 CHMP3Q9Y3E7 222 aa12.11□□□□□ -0.47
CHD7-208ENST00000528280 ZNF804BA4D1E1 1349 aa12.11□□□□□ -0.47
CHD7-208ENST00000528280 MED23Q9ULK4 1368 aa12.1□□□□□ -0.47
CHD7-208ENST00000528280 RSBN1LQ6PCB5 846 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms