RNA–Protein interactions for RNA: ENST00000522911.5

SDC2-207, Transcript of syndecan 2, humanhuman

TSL 3 BASIC

Gene SDC2, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-207ENST00000522911 DBNDD1Q9H9R9 158 aa12.16□□□□□ -0.46
SDC2-207ENST00000522911 ZBTB12Q9Y330 459 aaPredicted RBP12.16□□□□□ -0.46
SDC2-207ENST00000522911 TAF1P21675 1872 aa12.16□□□□□ -0.46
SDC2-207ENST00000522911 COL4A1P02462 1669 aa12.16□□□□□ -0.46
SDC2-207ENST00000522911 C6orf229H3BNL8 230 aa12.15□□□□□ -0.46
SDC2-207ENST00000522911 AOC2O75106 756 aa12.15□□□□□ -0.46
SDC2-207ENST00000522911 DDX58O95786 925 aaKnown RBP12.15□□□□□ -0.46
SDC2-207ENST00000522911 HOXD11P31277 338 aaPredicted RBP12.15□□□□□ -0.46
SDC2-207ENST00000522911 MMP14P50281 582 aa12.15□□□□□ -0.46
SDC2-207ENST00000522911 ZNF280AP59817 542 aaPredicted RBP12.15□□□□□ -0.46
SDC2-207ENST00000522911 PAXIP1Q6ZW49 1069 aaPredicted RBP12.15□□□□□ -0.46
SDC2-207ENST00000522911 KRT26Q7Z3Y9 468 aa12.15□□□□□ -0.46
SDC2-207ENST00000522911 METTL22Q9BUU2 404 aaPredicted RBP12.15□□□□□ -0.46
SDC2-207ENST00000522911 SAGE1Q9NXZ1 904 aa12.15□□□□□ -0.46
SDC2-207ENST00000522911 SHTN1A0MZ66 631 aa12.14□□□□□ -0.47
SDC2-207ENST00000522911 APAF1O14727 1248 aa12.14□□□□□ -0.47
SDC2-207ENST00000522911 HUNKP57058 714 aa12.14□□□□□ -0.47
SDC2-207ENST00000522911 CCDC27Q2M243 656 aa12.14□□□□□ -0.47
SDC2-207ENST00000522911 CCDC30Q5VVM6 783 aa12.14□□□□□ -0.47
SDC2-207ENST00000522911 SAMD7Q7Z3H4 446 aa12.14□□□□□ -0.47
SDC2-207ENST00000522911 PODNQ7Z5L7 613 aa12.14□□□□□ -0.47
SDC2-207ENST00000522911 USP48Q86UV5 1035 aa12.14□□□□□ -0.47
SDC2-207ENST00000522911 CCDC102AQ96A19 550 aa12.14□□□□□ -0.47
SDC2-207ENST00000522911 DCPSQ96C86 337 aaKnown RBP12.14□□□□□ -0.47
SDC2-207ENST00000522911 GMLQ99445 158 aa12.14□□□□□ -0.47
SDC2-207ENST00000522911 PHAXQ9H814 394 aaKnown RBP12.14□□□□□ -0.47
SDC2-207ENST00000522911 CWC25Q9NXE8 425 aaPredicted RBP12.14□□□□□ -0.47
SDC2-207ENST00000522911 GGA1Q9UJY5 639 aa12.14□□□□□ -0.47
SDC2-207ENST00000522911 XDHP47989 1333 aa12.13□□□□□ -0.47
SDC2-207ENST00000522911 PITPNM2Q9BZ72 1349 aa12.13□□□□□ -0.47
SDC2-207ENST00000522911 FAM155AB1AL88 458 aaPredicted RBP12.13□□□□□ -0.47
SDC2-207ENST00000522911 EGFRP00533 1210 aa12.13□□□□□ -0.47
SDC2-207ENST00000522911 FKBP1BP68106 108 aa12.13□□□□□ -0.47
SDC2-207ENST00000522911 TBC1D10BQ4KMP7 808 aaPredicted RBP12.13□□□□□ -0.47
SDC2-207ENST00000522911 RGMBQ6NW40 437 aa12.13□□□□□ -0.47
SDC2-207ENST00000522911 REM2Q8IYK8 340 aaPredicted RBP12.13□□□□□ -0.47
SDC2-207ENST00000522911 C2orf69Q8N8R5 385 aa12.13□□□□□ -0.47
SDC2-207ENST00000522911 GBA2Q9HCG7 927 aaPredicted RBP12.13□□□□□ -0.47
SDC2-207ENST00000522911 SEC31BQ9NQW1 1179 aa12.13□□□□□ -0.47
SDC2-207ENST00000522911 KCNQ5Q9NR82 932 aa12.13□□□□□ -0.47
SDC2-207ENST00000522911 RIMBP2O15034 1052 aa12.12□□□□□ -0.47
SDC2-207ENST00000522911 UFL1O94874 794 aa12.12□□□□□ -0.47
SDC2-207ENST00000522911 KIF4BQ2VIQ3 1234 aa12.12□□□□□ -0.47
SDC2-207ENST00000522911 RSBN1LQ6PCB5 846 aaPredicted RBP12.12□□□□□ -0.47
SDC2-207ENST00000522911 KSR2Q6VAB6 950 aa12.12□□□□□ -0.47
SDC2-207ENST00000522911 C8orf58Q8NAV2 365 aa12.12□□□□□ -0.47
SDC2-207ENST00000522911 MYD88Q99836 296 aa12.12□□□□□ -0.47
SDC2-207ENST00000522911 BSDC1Q9NW68 430 aaPredicted RBP12.12□□□□□ -0.47
SDC2-207ENST00000522911 ANKIB1Q9P2G1 1089 aa12.12□□□□□ -0.47
SDC2-207ENST00000522911 SCN9AQ15858 1988 aa12.12□□□□□ -0.47
SDC2-207ENST00000522911 PSME4Q14997 1843 aa12.11□□□□□ -0.47
SDC2-207ENST00000522911 MED23Q9ULK4 1368 aa12.11□□□□□ -0.47
SDC2-207ENST00000522911 ATP2B4P23634 1241 aa12.11□□□□□ -0.47
SDC2-207ENST00000522911 CTSWP56202 376 aa12.11□□□□□ -0.47
SDC2-207ENST00000522911 DOK7Q18PE1 504 aa12.11□□□□□ -0.47
SDC2-207ENST00000522911 RTL5Q5HYW3 569 aaPredicted RBP12.11□□□□□ -0.47
SDC2-207ENST00000522911 ANKRD18AQ8IVF6 992 aa12.11□□□□□ -0.47
SDC2-207ENST00000522911 SULF1Q8IWU6 871 aa12.11□□□□□ -0.47
SDC2-207ENST00000522911 CDC5LQ99459 802 aaKnown RBP12.11□□□□□ -0.47
SDC2-207ENST00000522911 ZNF408Q9H9D4 720 aa12.11□□□□□ -0.47
SDC2-207ENST00000522911 IL16Q14005 1332 aa12.11□□□□□ -0.47
SDC2-207ENST00000522911 IGKV5-2P06315 115 aa12.1□□□□□ -0.47
SDC2-207ENST00000522911 SLC10A3P09131 477 aa12.1□□□□□ -0.47
SDC2-207ENST00000522911 GRM1Q13255 1194 aa12.1□□□□□ -0.47
SDC2-207ENST00000522911 TTLL11Q8NHH1 800 aa12.1□□□□□ -0.47
SDC2-207ENST00000522911 PLA2G12BQ9BX93 195 aa12.1□□□□□ -0.47
SDC2-207ENST00000522911 GGA3Q9NZ52 723 aa12.1□□□□□ -0.47
SDC2-207ENST00000522911 USP17L3A6NCW0 530 aa12.09□□□□□ -0.47
SDC2-207ENST00000522911 USP17L4A6NCW7 530 aa12.09□□□□□ -0.47
SDC2-207ENST00000522911 USP17L1Q7RTZ2 530 aa12.09□□□□□ -0.47
SDC2-207ENST00000522911 MCOLN1Q9GZU1 580 aa12.09□□□□□ -0.47
SDC2-207ENST00000522911 MINPP1Q9UNW1 487 aa12.09□□□□□ -0.47
SDC2-207ENST00000522911 MAP3K2Q9Y2U5 619 aa12.09□□□□□ -0.47
SDC2-207ENST00000522911 MYO3BQ8WXR4 1341 aa12.09□□□□□ -0.47
SDC2-207ENST00000522911 PI4KAP2A4QPH2 592 aa12.08□□□□□ -0.48
SDC2-207ENST00000522911 ADM5C9JUS6 153 aa12.08□□□□□ -0.48
SDC2-207ENST00000522911 G3V3G9 751 aa12.08□□□□□ -0.48
SDC2-207ENST00000522911 H7C1W4 665 aa12.08□□□□□ -0.48
SDC2-207ENST00000522911 ELL2O00472 640 aaPredicted RBP12.08□□□□□ -0.48
SDC2-207ENST00000522911 USP17L8P0C7I0 530 aa12.08□□□□□ -0.48
SDC2-207ENST00000522911 NEXNQ0ZGT2 675 aa12.08□□□□□ -0.48
SDC2-207ENST00000522911 DCAF8Q5TAQ9 597 aa12.08□□□□□ -0.48
SDC2-207ENST00000522911 TSPYL6Q8N831 410 aa12.08□□□□□ -0.48
SDC2-207ENST00000522911 PI4KAP1Q8N8J0 262 aa12.08□□□□□ -0.48
SDC2-207ENST00000522911 CNKSR2Q8WXI2 1034 aa12.08□□□□□ -0.48
SDC2-207ENST00000522911 ZNF428Q96B54 188 aa12.08□□□□□ -0.48
SDC2-207ENST00000522911 ZIC5Q96T25 663 aa12.08□□□□□ -0.48
SDC2-207ENST00000522911 MYOZ2Q9NPC6 264 aa12.08□□□□□ -0.48
SDC2-207ENST00000522911 LEMD3Q9Y2U8 911 aa12.08□□□□□ -0.48
SDC2-207ENST00000522911 PAPPA2Q9BXP8 1791 aa12.07□□□□□ -0.48
SDC2-207ENST00000522911 NEURL1BA8MQ27 555 aa12.07□□□□□ -0.48
SDC2-207ENST00000522911 ZNF157P51786 506 aaPredicted RBP12.07□□□□□ -0.48
SDC2-207ENST00000522911 MLLT1Q03111 559 aaPredicted RBP12.07□□□□□ -0.48
SDC2-207ENST00000522911 SCARF1Q14162 830 aa12.07□□□□□ -0.48
SDC2-207ENST00000522911 STRIP1Q5VSL9 837 aa12.07□□□□□ -0.48
SDC2-207ENST00000522911 DLK2Q6UY11 383 aa12.07□□□□□ -0.48
SDC2-207ENST00000522911 WWC1Q8IX03 1113 aa12.07□□□□□ -0.48
SDC2-207ENST00000522911 CDCA5Q96FF9 252 aa12.07□□□□□ -0.48
SDC2-207ENST00000522911 STK31Q9BXU1 1019 aa12.07□□□□□ -0.48
SDC2-207ENST00000522911 COA1Q9GZY4 146 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms