RNA–Protein interactions for RNA: ENST00000518251.1

BRD9-216, Transcript of bromodomain containing 9, humanhuman

TSL 4

Gene BRD9, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-216ENST00000518251 OLFM4Q6UX06 510 aa13.03□□□□□ -0.32
BRD9-216ENST00000518251 NLRP10Q86W26 655 aa13.03□□□□□ -0.32
BRD9-216ENST00000518251 NBPF5PQ86XG9 351 aaPredicted RBP13.03□□□□□ -0.32
BRD9-216ENST00000518251 ZBTB47Q9UFB7 747 aaPredicted RBP13.03□□□□□ -0.32
BRD9-216ENST00000518251 ABCC12Q96J65 1359 aa13.03□□□□□ -0.32
BRD9-216ENST00000518251 TMEM88BA6NKF7 163 aa13.02□□□□□ -0.33
BRD9-216ENST00000518251 NPR1P16066 1061 aa13.02□□□□□ -0.33
BRD9-216ENST00000518251 RABL6Q3YEC7 729 aaPredicted RBP13.02□□□□□ -0.33
BRD9-216ENST00000518251 ANKRD45Q5TZF3 282 aa13.02□□□□□ -0.33
BRD9-216ENST00000518251 CHD1LQ86WJ1 897 aa13.02□□□□□ -0.33
BRD9-216ENST00000518251 ZNF34Q8IZ26 560 aa13.02□□□□□ -0.33
BRD9-216ENST00000518251 JARID2Q92833 1246 aaPredicted RBP13.02□□□□□ -0.33
BRD9-216ENST00000518251 ZNF277Q9NRM2 450 aaPredicted RBP13.02□□□□□ -0.33
BRD9-216ENST00000518251 UBN2Q6ZU65 1347 aa13.02□□□□□ -0.33
BRD9-216ENST00000518251 CDHR2Q9BYE9 1310 aa13.02□□□□□ -0.33
BRD9-216ENST00000518251 CTCFP49711 727 aaPredicted RBP13.01□□□□□ -0.33
BRD9-216ENST00000518251 PARP10Q53GL7 1025 aa13.01□□□□□ -0.33
BRD9-216ENST00000518251 EAPPQ56P03 285 aaPredicted RBP13.01□□□□□ -0.33
BRD9-216ENST00000518251 EPHA10Q5JZY3 1008 aa13.01□□□□□ -0.33
BRD9-216ENST00000518251 CLEC4GQ6UXB4 293 aa13.01□□□□□ -0.33
BRD9-216ENST00000518251 ZBTB38Q8NAP3 1195 aaPredicted RBP13.01□□□□□ -0.33
BRD9-216ENST00000518251 LNPKQ9C0E8 428 aa13.01□□□□□ -0.33
BRD9-216ENST00000518251 HACL1Q9UJ83 578 aa13.01□□□□□ -0.33
BRD9-216ENST00000518251 EXOC6BQ9Y2D4 811 aa13.01□□□□□ -0.33
BRD9-216ENST00000518251 RIC1Q4ADV7 1423 aa13.01□□□□□ -0.33
BRD9-216ENST00000518251 MYH3P11055 1940 aa13□□□□□ -0.33
BRD9-216ENST00000518251 RASSF10A6NK89 507 aa13□□□□□ -0.33
BRD9-216ENST00000518251 PDE4AP27815 886 aa13□□□□□ -0.33
BRD9-216ENST00000518251 EPHX2P34913 555 aa13□□□□□ -0.33
BRD9-216ENST00000518251 RTL5Q5HYW3 569 aaPredicted RBP13□□□□□ -0.33
BRD9-216ENST00000518251 AIDAQ96BJ3 306 aa13□□□□□ -0.33
BRD9-216ENST00000518251 WBP1LQ9NX94 342 aa13□□□□□ -0.33
BRD9-216ENST00000518251 FZD9O00144 591 aa12.99□□□□□ -0.33
BRD9-216ENST00000518251 APBB1O00213 710 aa12.99□□□□□ -0.33
BRD9-216ENST00000518251 RAB11FIP3O75154 756 aa12.99□□□□□ -0.33
BRD9-216ENST00000518251 SURF6O75683 361 aaKnown RBP12.99□□□□□ -0.33
BRD9-216ENST00000518251 IARSP41252 1262 aaKnown RBP12.99□□□□□ -0.33
BRD9-216ENST00000518251 FOXO4P98177 505 aa12.99□□□□□ -0.33
BRD9-216ENST00000518251 HSP90AB4PQ58FF6 505 aa12.99□□□□□ -0.33
BRD9-216ENST00000518251 PLA2G12BQ9BX93 195 aa12.99□□□□□ -0.33
BRD9-216ENST00000518251 TRMT112Q9UI30 125 aaKnown RBP12.99□□□□□ -0.33
BRD9-216ENST00000518251 NIP7Q9Y221 180 aaKnown RBP eCLIP12.99□□□□□ -0.33
BRD9-216ENST00000518251 DDX60Q8IY21 1712 aaKnown RBP12.99□□□□□ -0.33
BRD9-216ENST00000518251 SH3TC1Q8TE82 1336 aa12.98□□□□□ -0.33
BRD9-216ENST00000518251 HSPA8P11142 646 aaKnown RBP12.98□□□□□ -0.33
BRD9-216ENST00000518251 LBX1P52954 281 aa12.98□□□□□ -0.33
BRD9-216ENST00000518251 CRY2Q49AN0 593 aa12.98□□□□□ -0.33
BRD9-216ENST00000518251 MAP1SQ66K74 1059 aaPredicted RBP12.98□□□□□ -0.33
BRD9-216ENST00000518251 LMBR1LQ6UX01 489 aa12.98□□□□□ -0.33
BRD9-216ENST00000518251 SLC51AQ86UW1 340 aa12.98□□□□□ -0.33
BRD9-216ENST00000518251 FAM89AQ96GI7 184 aa12.98□□□□□ -0.33
BRD9-216ENST00000518251 UTP14AQ9BVJ6 771 aaKnown RBP12.98□□□□□ -0.33
BRD9-216ENST00000518251 LRRCC1Q9C099 1032 aa12.98□□□□□ -0.33
BRD9-216ENST00000518251 NOP58Q9Y2X3 529 aaKnown RBP12.98□□□□□ -0.33
BRD9-216ENST00000518251 SMARCA5O60264 1052 aaPredicted RBP12.97□□□□□ -0.33
BRD9-216ENST00000518251 NTSR2O95665 410 aa12.97□□□□□ -0.33
BRD9-216ENST00000518251 OS9Q13438 667 aaPredicted RBP12.97□□□□□ -0.33
BRD9-216ENST00000518251 SUSD4Q5VX71 490 aa12.97□□□□□ -0.33
BRD9-216ENST00000518251 PNMA8AQ86V59 439 aaPredicted RBP12.97□□□□□ -0.33
BRD9-216ENST00000518251 ERC1Q8IUD2 1116 aa12.97□□□□□ -0.33
BRD9-216ENST00000518251 RTKN2Q8IZC4 609 aa12.97□□□□□ -0.33
BRD9-216ENST00000518251 GPC2Q8N158 579 aa12.97□□□□□ -0.33
BRD9-216ENST00000518251 CHMP3Q9Y3E7 222 aa12.97□□□□□ -0.33
BRD9-216ENST00000518251 IRS4O14654 1257 aaPredicted RBP12.96□□□□□ -0.33
BRD9-216ENST00000518251 PDE8AO60658 829 aa12.96□□□□□ -0.33
BRD9-216ENST00000518251 RFX5P48382 616 aaPredicted RBP12.96□□□□□ -0.33
BRD9-216ENST00000518251 TPTE2Q6XPS3 522 aa12.96□□□□□ -0.33
BRD9-216ENST00000518251 CNTROBQ8N137 903 aa12.96□□□□□ -0.33
BRD9-216ENST00000518251 KIF1BPQ96EK5 621 aa12.96□□□□□ -0.33
BRD9-216ENST00000518251 PSMD1Q99460 953 aa12.96□□□□□ -0.33
BRD9-216ENST00000518251 COPRSQ9NQ92 184 aa12.96□□□□□ -0.33
BRD9-216ENST00000518251 PA2G4Q9UQ80 394 aaKnown RBP12.96□□□□□ -0.33
BRD9-216ENST00000518251 WDR33Q9C0J8 1336 aaKnown RBP12.95□□□□□ -0.34
BRD9-216ENST00000518251 FAM177BA6PVY3 158 aa12.95□□□□□ -0.34
BRD9-216ENST00000518251 HSP90B1P14625 803 aaKnown RBP12.95□□□□□ -0.34
BRD9-216ENST00000518251 SCNN1DP51172 638 aa12.95□□□□□ -0.34
BRD9-216ENST00000518251 G3BP1Q13283 466 aaKnown RBP eCLIP12.95□□□□□ -0.34
BRD9-216ENST00000518251 RHPN1Q8TCX5 695 aa12.95□□□□□ -0.34
BRD9-216ENST00000518251 ABHD8Q96I13 439 aa12.95□□□□□ -0.34
BRD9-216ENST00000518251 SLC34A2O95436 690 aa12.94□□□□□ -0.34
BRD9-216ENST00000518251 CSF1RP07333 972 aa12.94□□□□□ -0.34
BRD9-216ENST00000518251 CTSWP56202 376 aa12.94□□□□□ -0.34
BRD9-216ENST00000518251 PTPN12Q05209 780 aaKnown RBP12.94□□□□□ -0.34
BRD9-216ENST00000518251 SYNE4Q8N205 404 aa12.94□□□□□ -0.34
BRD9-216ENST00000518251 NYXQ9GZU5 481 aa12.94□□□□□ -0.34
BRD9-216ENST00000518251 ABT1Q9ULW3 272 aaKnown RBP12.94□□□□□ -0.34
BRD9-216ENST00000518251 CLEC11AQ9Y240 323 aa12.94□□□□□ -0.34
BRD9-216ENST00000518251 FMR1Q06787 632 aaKnown RBP eCLIP12.93□□□□□ -0.34
BRD9-216ENST00000518251 CCDC57Q2TAC2 916 aa12.93□□□□□ -0.34
BRD9-216ENST00000518251 DEFB115Q30KQ5 88 aa12.93□□□□□ -0.34
BRD9-216ENST00000518251 FAM161AQ3B820 660 aa12.93□□□□□ -0.34
BRD9-216ENST00000518251 NUTM1Q86Y26 1132 aa12.93□□□□□ -0.34
BRD9-216ENST00000518251 KLHDC4Q8TBB5 520 aa12.93□□□□□ -0.34
BRD9-216ENST00000518251 SIL1Q9H173 461 aa12.93□□□□□ -0.34
BRD9-216ENST00000518251 IL1RAPL2Q9NP60 686 aa12.93□□□□□ -0.34
BRD9-216ENST00000518251 ALDH1B1P30837 517 aa12.92□□□□□ -0.34
BRD9-216ENST00000518251 MAP2K1Q02750 393 aaPredicted RBP12.92□□□□□ -0.34
BRD9-216ENST00000518251 PLEKHM2Q8IWE5 1019 aa12.92□□□□□ -0.34
BRD9-216ENST00000518251 TTLL11Q8NHH1 800 aa12.92□□□□□ -0.34
BRD9-216ENST00000518251 BCL11AQ9H165 835 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms