RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 CNBD1Q8NA66 436 aa14.06□□□□□ -0.16
PCDHGA6-201ENST00000517434 POLKQ9UBT6 870 aa14.06□□□□□ -0.16
PCDHGA6-201ENST00000517434 TRPC5Q9UL62 973 aaPredicted RBP14.06□□□□□ -0.16
PCDHGA6-201ENST00000517434 SBNO1A3KN83 1393 aa14.05□□□□□ -0.16
PCDHGA6-201ENST00000517434 ZNF165P49910 485 aa14.05□□□□□ -0.16
PCDHGA6-201ENST00000517434 GNAQP50148 359 aa14.05□□□□□ -0.16
PCDHGA6-201ENST00000517434 GIGYF2Q6Y7W6 1299 aaKnown RBP14.05□□□□□ -0.16
PCDHGA6-201ENST00000517434 TMTC2Q8N394 836 aa14.05□□□□□ -0.16
PCDHGA6-201ENST00000517434 CCDC87Q9NVE4 849 aa14.05□□□□□ -0.16
PCDHGA6-201ENST00000517434 EBAG9O00559 213 aa14.05□□□□□ -0.16
PCDHGA6-201ENST00000517434 MATR3P43243 847 aaKnown RBP eCLIP14.05□□□□□ -0.16
PCDHGA6-201ENST00000517434 CCDC8Q9H0W5 538 aaPredicted RBP14.05□□□□□ -0.16
PCDHGA6-201ENST00000517434 V9GYY5 206 aaPredicted RBP14.05□□□□□ -0.16
PCDHGA6-201ENST00000517434 EDC4Q6P2E9 1401 aaKnown RBP14.05□□□□□ -0.16
PCDHGA6-201ENST00000517434 TSPY2A6NKD2 308 aa14.05□□□□□ -0.16
PCDHGA6-201ENST00000517434 GRM8O00222 908 aa14.05□□□□□ -0.16
PCDHGA6-201ENST00000517434 IFIT3O14879 490 aaKnown RBP14.05□□□□□ -0.16
PCDHGA6-201ENST00000517434 CLGNO14967 610 aa14.05□□□□□ -0.16
PCDHGA6-201ENST00000517434 HOXB7P09629 217 aa14.05□□□□□ -0.16
PCDHGA6-201ENST00000517434 EIF5P55010 431 aaKnown RBP14.05□□□□□ -0.16
PCDHGA6-201ENST00000517434 FERMT3Q86UX7 667 aa14.05□□□□□ -0.16
PCDHGA6-201ENST00000517434 TESK2Q96S53 571 aa14.05□□□□□ -0.16
PCDHGA6-201ENST00000517434 KAT14Q9H8E8 782 aa14.05□□□□□ -0.16
PCDHGA6-201ENST00000517434 CCDC194A0A1B0GVG4 234 aa14.04□□□□□ -0.16
PCDHGA6-201ENST00000517434 HCLS1P14317 486 aaPredicted RBP14.04□□□□□ -0.16
PCDHGA6-201ENST00000517434 CERS3Q8IU89 383 aa14.04□□□□□ -0.16
PCDHGA6-201ENST00000517434 RBM27Q9P2N5 1060 aaKnown RBP14.04□□□□□ -0.16
PCDHGA6-201ENST00000517434 POLR3AO14802 1390 aaPredicted RBP14.04□□□□□ -0.16
PCDHGA6-201ENST00000517434 NFATC2IPQ8NCF5 419 aa14.04□□□□□ -0.16
PCDHGA6-201ENST00000517434 HMG20BQ9P0W2 317 aa14.04□□□□□ -0.16
PCDHGA6-201ENST00000517434 YEATS2Q9ULM3 1422 aa14.04□□□□□ -0.16
PCDHGA6-201ENST00000517434 IFFO1Q0D2I5 559 aa14.04□□□□□ -0.16
PCDHGA6-201ENST00000517434 SPA17Q15506 151 aa14.04□□□□□ -0.16
PCDHGA6-201ENST00000517434 A0A1B0GUA9 196 aa14.03□□□□□ -0.16
PCDHGA6-201ENST00000517434 GNG11P61952 73 aa14.03□□□□□ -0.16
PCDHGA6-201ENST00000517434 UBE2HP62256 183 aa14.03□□□□□ -0.16
PCDHGA6-201ENST00000517434 SARNPP82979 210 aaKnown RBP14.03□□□□□ -0.16
PCDHGA6-201ENST00000517434 CKAP2LQ8IYA6 745 aa14.03□□□□□ -0.16
PCDHGA6-201ENST00000517434 PYM1Q9BRP8 204 aaKnown RBP14.03□□□□□ -0.16
PCDHGA6-201ENST00000517434 RNMTO43148 476 aaKnown RBP14.03□□□□□ -0.16
PCDHGA6-201ENST00000517434 MFSD6Q6ZSS7 791 aa14.03□□□□□ -0.16
PCDHGA6-201ENST00000517434 ZNF830Q96NB3 372 aaPredicted RBP14.03□□□□□ -0.16
PCDHGA6-201ENST00000517434 CHPF2Q9P2E5 772 aa14.03□□□□□ -0.16
PCDHGA6-201ENST00000517434 CPSF2Q9P2I0 782 aaKnown RBP14.03□□□□□ -0.16
PCDHGA6-201ENST00000517434 MAST3O60307 1309 aa14.03□□□□□ -0.16
PCDHGA6-201ENST00000517434 CNNM2Q9H8M5 875 aa14.03□□□□□ -0.16
PCDHGA6-201ENST00000517434 MAP3K19Q56UN5 1328 aa14.02□□□□□ -0.16
PCDHGA6-201ENST00000517434 PLEKHG3A1L390 1219 aa14.02□□□□□ -0.16
PCDHGA6-201ENST00000517434 VGLL3A8MV65 326 aa14.02□□□□□ -0.16
PCDHGA6-201ENST00000517434 GNAT2P19087 354 aa14.02□□□□□ -0.16
PCDHGA6-201ENST00000517434 SLC39A6Q13433 755 aa14.02□□□□□ -0.16
PCDHGA6-201ENST00000517434 STXBP4Q6ZWJ1 553 aa14.02□□□□□ -0.16
PCDHGA6-201ENST00000517434 TMC6Q7Z403 805 aa14.02□□□□□ -0.16
PCDHGA6-201ENST00000517434 KRT23Q9C075 422 aa14.02□□□□□ -0.16
PCDHGA6-201ENST00000517434 SH2D4AQ9H788 454 aa14.02□□□□□ -0.16
PCDHGA6-201ENST00000517434 STX1AQ16623 288 aa14.02□□□□□ -0.17
PCDHGA6-201ENST00000517434 NAA16Q6N069 864 aaPredicted RBP14.02□□□□□ -0.17
PCDHGA6-201ENST00000517434 SPATA24Q86W54 205 aa14.02□□□□□ -0.17
PCDHGA6-201ENST00000517434 EYA1Q99502 592 aa14.02□□□□□ -0.17
PCDHGA6-201ENST00000517434 NAA15Q9BXJ9 866 aaKnown RBP14.02□□□□□ -0.17
PCDHGA6-201ENST00000517434 RBM28Q9NW13 759 aaKnown RBP14.02□□□□□ -0.17
PCDHGA6-201ENST00000517434 NSFL1CQ9UNZ2 370 aaKnown RBP14.02□□□□□ -0.17
PCDHGA6-201ENST00000517434 SPECC1Q5M775 1068 aa14.02□□□□□ -0.17
PCDHGA6-201ENST00000517434 TTC12Q9H892 705 aaPredicted RBP14.02□□□□□ -0.17
PCDHGA6-201ENST00000517434 FGFR1OPO95684 399 aaKnown RBP14.01□□□□□ -0.17
PCDHGA6-201ENST00000517434 EIF6P56537 245 aaKnown RBP14.01□□□□□ -0.17
PCDHGA6-201ENST00000517434 MCM6Q14566 821 aa14.01□□□□□ -0.17
PCDHGA6-201ENST00000517434 CCDC186Q7Z3E2 898 aa14.01□□□□□ -0.17
PCDHGA6-201ENST00000517434 ORAI2Q96SN7 254 aa14.01□□□□□ -0.17
PCDHGA6-201ENST00000517434 MAST1Q9Y2H9 1570 aa14.01□□□□□ -0.17
PCDHGA6-201ENST00000517434 H0YIN7 160 aa14.01□□□□□ -0.17
PCDHGA6-201ENST00000517434 GCOM1H8Y6P7 765 aaPredicted RBP14.01□□□□□ -0.17
PCDHGA6-201ENST00000517434 GOLIM4O00461 696 aa14.01□□□□□ -0.17
PCDHGA6-201ENST00000517434 IRS4O14654 1257 aaPredicted RBP14.01□□□□□ -0.17
PCDHGA6-201ENST00000517434 MYZAPP0CAP1 466 aa14.01□□□□□ -0.17
PCDHGA6-201ENST00000517434 CASTP20810 708 aaKnown RBP14.01□□□□□ -0.17
PCDHGA6-201ENST00000517434 C20orf194Q5TEA3 1177 aa14.01□□□□□ -0.17
PCDHGA6-201ENST00000517434 CCDC113Q9H0I3 377 aa14.01□□□□□ -0.17
PCDHGA6-201ENST00000517434 GOLGA8AA7E2F4 631 aa14.01□□□□□ -0.17
PCDHGA6-201ENST00000517434 GOLGA8BA8MQT2 603 aa14.01□□□□□ -0.17
PCDHGA6-201ENST00000517434 SSRP1Q08945 709 aaKnown RBP14.01□□□□□ -0.17
PCDHGA6-201ENST00000517434 CEP57Q86XR8 500 aa14.01□□□□□ -0.17
PCDHGA6-201ENST00000517434 OTUD6BQ8N6M0 293 aa14.01□□□□□ -0.17
PCDHGA6-201ENST00000517434 TANGO6Q9C0B7 1094 aa14.01□□□□□ -0.17
PCDHGA6-201ENST00000517434 DDX21Q9NR30 783 aaKnown RBP eCLIP14.01□□□□□ -0.17
PCDHGA6-201ENST00000517434 SKILP12757 684 aa14.01□□□□□ -0.17
PCDHGA6-201ENST00000517434 LMBR1LQ6UX01 489 aa14.01□□□□□ -0.17
PCDHGA6-201ENST00000517434 APBA3O96018 575 aa14□□□□□ -0.17
PCDHGA6-201ENST00000517434 TUBB4BP68371 445 aa14□□□□□ -0.17
PCDHGA6-201ENST00000517434 MTHFSDQ2M296 383 aaKnown RBP14□□□□□ -0.17
PCDHGA6-201ENST00000517434 LRRC27Q9C0I9 530 aa14□□□□□ -0.17
PCDHGA6-201ENST00000517434 SH3TC1Q8TE82 1336 aa14□□□□□ -0.17
PCDHGA6-201ENST00000517434 FAM98CQ17RN3 349 aaKnown RBP14□□□□□ -0.17
PCDHGA6-201ENST00000517434 ESR2Q92731 530 aa14□□□□□ -0.17
PCDHGA6-201ENST00000517434 CYP7A1P22680 504 aa14□□□□□ -0.17
PCDHGA6-201ENST00000517434 NCOA7Q8NI08 942 aa14□□□□□ -0.17
PCDHGA6-201ENST00000517434 BEGAINQ9BUH8 593 aa14□□□□□ -0.17
PCDHGA6-201ENST00000517434 SPATA31E1Q6ZUB1 1445 aa14□□□□□ -0.17
PCDHGA6-201ENST00000517434 USO1O60763 962 aaKnown RBP13.99□□□□□ -0.17
PCDHGA6-201ENST00000517434 NLRP5P59047 1200 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms