RNA–Protein interactions for RNA: ENST00000515833.2

MATR3-226, Transcript of matrin 3, humanhuman

TSL 5

Gene MATR3, Length 1,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-226ENST00000515833 GHRHP01286 108 aa6.95□□□□□ -1.3
MATR3-226ENST00000515833 C11orf91Q3C1V1 193 aa6.95□□□□□ -1.3
MATR3-226ENST00000515833 LARP1Q6PKG0 1096 aaKnown RBP6.95□□□□□ -1.3
MATR3-226ENST00000515833 CMTR1Q8N1G2 835 aaKnown RBP6.95□□□□□ -1.3
MATR3-226ENST00000515833 NSUN5Q96P11 429 aaKnown RBP6.95□□□□□ -1.3
MATR3-226ENST00000515833 SRA1Q9HD15 236 aaKnown RBP6.95□□□□□ -1.3
MATR3-226ENST00000515833 MMP20O60882 483 aa6.94□□□□□ -1.3
MATR3-226ENST00000515833 PSAPP07602 524 aa6.94□□□□□ -1.3
MATR3-226ENST00000515833 CRTC2Q53ET0 693 aaPredicted RBP6.94□□□□□ -1.3
MATR3-226ENST00000515833 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.94□□□□□ -1.3
MATR3-226ENST00000515833 MAP4K3Q8IVH8 894 aa6.94□□□□□ -1.3
MATR3-226ENST00000515833 ZNF777Q9ULD5 760 aaPredicted RBP6.94□□□□□ -1.3
MATR3-226ENST00000515833 TRIM33Q9UPN9 1127 aa6.94□□□□□ -1.3
MATR3-226ENST00000515833 CCDC9Q9Y3X0 531 aaKnown RBP6.94□□□□□ -1.3
MATR3-226ENST00000515833 MAFBQ9Y5Q3 323 aaPredicted RBP6.94□□□□□ -1.3
MATR3-226ENST00000515833 PTK7Q13308 1070 aa6.93□□□□□ -1.3
MATR3-226ENST00000515833 ZDHHC13Q8IUH4 622 aa6.93□□□□□ -1.3
MATR3-226ENST00000515833 RGL4Q8IZJ4 473 aa6.93□□□□□ -1.3
MATR3-226ENST00000515833 ARMC10Q8N2F6 343 aa6.93□□□□□ -1.3
MATR3-226ENST00000515833 GALNT11Q8NCW6 608 aa6.93□□□□□ -1.3
MATR3-226ENST00000515833 DHX15O43143 795 aaKnown RBP6.92□□□□□ -1.3
MATR3-226ENST00000515833 WISP1O95388 367 aa6.92□□□□□ -1.3
MATR3-226ENST00000515833 DCAF11Q8TEB1 546 aa6.92□□□□□ -1.3
MATR3-226ENST00000515833 MYO19Q96H55 970 aa6.92□□□□□ -1.3
MATR3-226ENST00000515833 RBSNQ9H1K0 784 aa6.92□□□□□ -1.3
MATR3-226ENST00000515833 SPINK2P20155 84 aa6.91□□□□□ -1.3
MATR3-226ENST00000515833 LCE1DQ5T752 114 aa6.91□□□□□ -1.3
MATR3-226ENST00000515833 PROSER2Q86WR7 435 aaPredicted RBP6.91□□□□□ -1.3
MATR3-226ENST00000515833 ANKMY2Q8IV38 441 aa6.91□□□□□ -1.3
MATR3-226ENST00000515833 VTI1AQ96AJ9 217 aa6.91□□□□□ -1.3
MATR3-226ENST00000515833 LRFN2Q9ULH4 789 aa6.91□□□□□ -1.3
MATR3-226ENST00000515833 PPME1Q9Y570 386 aa6.91□□□□□ -1.3
MATR3-226ENST00000515833 KCNMB2Q9Y691 235 aa6.91□□□□□ -1.3
MATR3-226ENST00000515833 LINC01387J3KSC0 135 aa6.9□□□□□ -1.3
MATR3-226ENST00000515833 WEE1P30291 646 aa6.9□□□□□ -1.3
MATR3-226ENST00000515833 SOX18P35713 384 aa6.9□□□□□ -1.3
MATR3-226ENST00000515833 NFIAQ12857 509 aa6.9□□□□□ -1.3
MATR3-226ENST00000515833 FZD5Q13467 585 aa6.9□□□□□ -1.3
MATR3-226ENST00000515833 KANK4Q5T7N3 995 aaPredicted RBP6.9□□□□□ -1.3
MATR3-226ENST00000515833 INTS5Q6P9B9 1019 aaKnown RBP6.9□□□□□ -1.3
MATR3-226ENST00000515833 TREML1Q86YW5 311 aa6.9□□□□□ -1.3
MATR3-226ENST00000515833 TRIM42Q8IWZ5 723 aa6.9□□□□□ -1.3
MATR3-226ENST00000515833 MUC3BQ9H195 1237 aa6.9□□□□□ -1.3
MATR3-226ENST00000515833 C7orf69Q9H7B7 122 aa6.9□□□□□ -1.3
MATR3-226ENST00000515833 KCNK4Q9NYG8 393 aa6.9□□□□□ -1.3
MATR3-226ENST00000515833 HMX2A2RU54 273 aa6.89□□□□□ -1.31
MATR3-226ENST00000515833 PRR19A6NJB7 356 aa6.89□□□□□ -1.31
MATR3-226ENST00000515833 FOXO3O43524 673 aa6.89□□□□□ -1.31
MATR3-226ENST00000515833 HOXD8P13378 290 aaPredicted RBP6.89□□□□□ -1.31
MATR3-226ENST00000515833 GRIK1P39086 918 aa6.89□□□□□ -1.31
MATR3-226ENST00000515833 TXNDC11Q6PKC3 985 aa6.89□□□□□ -1.31
MATR3-226ENST00000515833 ACAD11Q709F0 780 aa6.89□□□□□ -1.31
MATR3-226ENST00000515833 CCDC97Q96F63 343 aaPredicted RBP6.89□□□□□ -1.31
MATR3-226ENST00000515833 KRTAP4-7Q9BYR0 210 aa6.89□□□□□ -1.31
MATR3-226ENST00000515833 CEP41Q9BYV8 373 aa6.89□□□□□ -1.31
MATR3-226ENST00000515833 USP17L15C9J2P7 530 aa6.88□□□□□ -1.31
MATR3-226ENST00000515833 USP17L10C9JJH3 530 aa6.88□□□□□ -1.31
MATR3-226ENST00000515833 USP17L13C9JLJ4 530 aa6.88□□□□□ -1.31
MATR3-226ENST00000515833 USP17L12C9JPN9 530 aa6.88□□□□□ -1.31
MATR3-226ENST00000515833 USP17L11C9JVI0 530 aa6.88□□□□□ -1.31
MATR3-226ENST00000515833 USP17L21D6R901 530 aa6.88□□□□□ -1.31
MATR3-226ENST00000515833 USP17L18D6R9N7 530 aa6.88□□□□□ -1.31
MATR3-226ENST00000515833 USP17L22D6RA61 530 aa6.88□□□□□ -1.31
MATR3-226ENST00000515833 USP17L17D6RBQ6 530 aa6.88□□□□□ -1.31
MATR3-226ENST00000515833 USP17L19D6RCP7 530 aa6.88□□□□□ -1.31
MATR3-226ENST00000515833 USP17L20D6RJB6 530 aa6.88□□□□□ -1.31
MATR3-226ENST00000515833 CD68P34810 354 aaPredicted RBP6.88□□□□□ -1.31
MATR3-226ENST00000515833 USP17L24Q0WX57 530 aa6.88□□□□□ -1.31
MATR3-226ENST00000515833 RNF43Q68DV7 783 aa6.88□□□□□ -1.31
MATR3-226ENST00000515833 DTX1Q86Y01 620 aa6.88□□□□□ -1.31
MATR3-226ENST00000515833 CACTIN-AS1Q8N1I8 211 aa6.88□□□□□ -1.31
MATR3-226ENST00000515833 GLMNQ92990 594 aa6.88□□□□□ -1.31
MATR3-226ENST00000515833 UTP4Q969X6 686 aaKnown RBP6.88□□□□□ -1.31
MATR3-226ENST00000515833 SERPINA10Q9UK55 444 aa6.88□□□□□ -1.31
MATR3-226ENST00000515833 FAM196BA6NMK8 535 aa6.87□□□□□ -1.31
MATR3-226ENST00000515833 WNT11O96014 354 aa6.87□□□□□ -1.31
MATR3-226ENST00000515833 FNBP4Q8N3X1 1017 aaPredicted RBP6.87□□□□□ -1.31
MATR3-226ENST00000515833 FAM46AQ96IP4 442 aaKnown RBP6.87□□□□□ -1.31
MATR3-226ENST00000515833 DBNDD2Q9BQY9 259 aa6.87□□□□□ -1.31
MATR3-226ENST00000515833 LACRTQ9GZZ8 138 aa6.87□□□□□ -1.31
MATR3-226ENST00000515833 TM4SF5O14894 197 aa6.86□□□□□ -1.31
MATR3-226ENST00000515833 CDC25BP30305 580 aa6.86□□□□□ -1.31
MATR3-226ENST00000515833 COL13A1Q5TAT6 717 aaPredicted RBP6.86□□□□□ -1.31
MATR3-226ENST00000515833 KIAA1211Q6ZU35 1233 aa6.86□□□□□ -1.31
MATR3-226ENST00000515833 NLRP13Q86W25 1043 aa6.86□□□□□ -1.31
MATR3-226ENST00000515833 TRAIPQ9BWF2 469 aa6.86□□□□□ -1.31
MATR3-226ENST00000515833 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.86□□□□□ -1.311e-17■■■■■ 39.7
MATR3-226ENST00000515833 ATP11AP98196 1134 aa6.85□□□□□ -1.31
MATR3-226ENST00000515833 TRIP4Q15650 581 aaPredicted RBP6.85□□□□□ -1.31
MATR3-226ENST00000515833 UVSSAQ2YD98 709 aa6.85□□□□□ -1.31
MATR3-226ENST00000515833 COX20Q5RI15 118 aa6.85□□□□□ -1.31
MATR3-226ENST00000515833 CEP135Q66GS9 1140 aa6.85□□□□□ -1.31
MATR3-226ENST00000515833 MYRFLQ96LU7 910 aa6.85□□□□□ -1.31
MATR3-226ENST00000515833 CARD10Q9BWT7 1032 aa6.85□□□□□ -1.31
MATR3-226ENST00000515833 PPP1R12CQ9BZL4 782 aa6.85□□□□□ -1.31
MATR3-226ENST00000515833 VRTNQ9H8Y1 702 aa6.85□□□□□ -1.31
MATR3-226ENST00000515833 ADGRE2Q9UHX3 823 aa6.85□□□□□ -1.31
MATR3-226ENST00000515833 DDX3YO15523 660 aaKnown RBP6.84□□□□□ -1.31
MATR3-226ENST00000515833 CDC27P30260 824 aa6.84□□□□□ -1.31
MATR3-226ENST00000515833 DUOXA2Q1HG44 320 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms