RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 TRIM47Q96LD4 638 aa8.31□□□□□ -1.08
UBE2D3-224ENST00000508474 RNF41Q9H4P4 317 aaPredicted RBP8.31□□□□□ -1.08
UBE2D3-224ENST00000508474 RRP15Q9Y3B9 282 aaKnown RBP8.31□□□□□ -1.08
UBE2D3-224ENST00000508474 SYNJ2O15056 1496 aa8.31□□□□□ -1.08
UBE2D3-224ENST00000508474 NUP160Q12769 1436 aa8.31□□□□□ -1.08
UBE2D3-224ENST00000508474 A0A087WZG4 1122 aa8.31□□□□□ -1.08
UBE2D3-224ENST00000508474 GOLGA6BA6NDN3 693 aa8.31□□□□□ -1.08
UBE2D3-224ENST00000508474 PCK1P35558 622 aa8.31□□□□□ -1.08
UBE2D3-224ENST00000508474 RRAGBQ5VZM2 374 aa8.31□□□□□ -1.08
UBE2D3-224ENST00000508474 FAM71BQ8TC56 605 aa8.31□□□□□ -1.08
UBE2D3-224ENST00000508474 MIPOL1Q8TD10 442 aa8.31□□□□□ -1.08
UBE2D3-224ENST00000508474 GUCA1BQ9UMX6 200 aa8.31□□□□□ -1.08
UBE2D3-224ENST00000508474 BRD1O95696 1058 aa8.31□□□□□ -1.08
UBE2D3-224ENST00000508474 GCKP35557 465 aa8.31□□□□□ -1.08
UBE2D3-224ENST00000508474 TMEM266Q2M3C6 531 aa8.31□□□□□ -1.08
UBE2D3-224ENST00000508474 CCDC38Q502W7 563 aa8.31□□□□□ -1.08
UBE2D3-224ENST00000508474 MRPL50Q8N5N7 158 aaKnown RBP8.31□□□□□ -1.08
UBE2D3-224ENST00000508474 FBXO3Q9UK99 471 aa8.31□□□□□ -1.08
UBE2D3-224ENST00000508474 RBM8AQ9Y5S9 174 aaKnown RBP8.31□□□□□ -1.08
UBE2D3-224ENST00000508474 EPRSP07814 1512 aaKnown RBP8.3□□□□□ -1.08
UBE2D3-224ENST00000508474 RTEL1-TNFRSF6BF6WH68 1400 aa8.3□□□□□ -1.08
UBE2D3-224ENST00000508474 IFIT1P09914 478 aaKnown RBP8.3□□□□□ -1.08
UBE2D3-224ENST00000508474 RUFY4Q6ZNE9 571 aa8.3□□□□□ -1.08
UBE2D3-224ENST00000508474 NCOA7Q8NI08 942 aa8.3□□□□□ -1.08
UBE2D3-224ENST00000508474 RHPN1Q8TCX5 695 aa8.3□□□□□ -1.08
UBE2D3-224ENST00000508474 SMC6Q96SB8 1091 aa8.3□□□□□ -1.08
UBE2D3-224ENST00000508474 SELENOSQ9BQE4 189 aa8.3□□□□□ -1.08
UBE2D3-224ENST00000508474 THUMPD2Q9BTF0 503 aaKnown RBP8.3□□□□□ -1.08
UBE2D3-224ENST00000508474 MTMR7Q9Y216 660 aa8.3□□□□□ -1.08
UBE2D3-224ENST00000508474 TTC41PQ6P2S7 1318 aa8.3□□□□□ -1.08
UBE2D3-224ENST00000508474 FLIIQ13045 1269 aa8.3□□□□□ -1.08
UBE2D3-224ENST00000508474 RBBP5Q15291 538 aaKnown RBP8.3□□□□□ -1.08
UBE2D3-224ENST00000508474 CCDC40Q4G0X9 1142 aa8.3□□□□□ -1.08
UBE2D3-224ENST00000508474 CEP85LQ5SZL2 805 aa8.3□□□□□ -1.08
UBE2D3-224ENST00000508474 GAS2L3Q86XJ1 694 aa8.3□□□□□ -1.08
UBE2D3-224ENST00000508474 CCDC42Q96M95 316 aa8.3□□□□□ -1.08
UBE2D3-224ENST00000508474 SPATS2LQ9NUQ6 558 aaKnown RBP8.3□□□□□ -1.08
UBE2D3-224ENST00000508474 MPHOSPH10O00566 681 aaKnown RBP8.3□□□□□ -1.08
UBE2D3-224ENST00000508474 ATP5DP30049 168 aa8.3□□□□□ -1.08
UBE2D3-224ENST00000508474 METAP2P50579 478 aaKnown RBP eCLIP8.3□□□□□ -1.08
UBE2D3-224ENST00000508474 RNF168Q8IYW5 571 aaPredicted RBP8.3□□□□□ -1.08
UBE2D3-224ENST00000508474 NEK11Q8NG66 645 aa8.3□□□□□ -1.08
UBE2D3-224ENST00000508474 CABS1Q96KC9 395 aa8.3□□□□□ -1.08
UBE2D3-224ENST00000508474 CFAP57Q96MR6 1250 aa8.3□□□□□ -1.08
UBE2D3-224ENST00000508474 ZNF215Q9UL58 517 aaPredicted RBP8.3□□□□□ -1.08
UBE2D3-224ENST00000508474 A0A087WUV0 522 aaPredicted RBP8.29□□□□□ -1.08
UBE2D3-224ENST00000508474 CCDC160A6NGH7 325 aa8.29□□□□□ -1.08
UBE2D3-224ENST00000508474 RLBP1P12271 317 aa8.29□□□□□ -1.08
UBE2D3-224ENST00000508474 ALDH3A1P30838 453 aa8.29□□□□□ -1.08
UBE2D3-224ENST00000508474 RUFY3Q7L099 469 aa8.29□□□□□ -1.08
UBE2D3-224ENST00000508474 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.29□□□□□ -1.085e-17■□□□□ 9.4
UBE2D3-224ENST00000508474 TSC1Q92574 1164 aa8.29□□□□□ -1.08
UBE2D3-224ENST00000508474 CAPZA3Q96KX2 299 aa8.29□□□□□ -1.08
UBE2D3-224ENST00000508474 VEZTQ9HBM0 779 aa8.29□□□□□ -1.08
UBE2D3-224ENST00000508474 MBIPQ9NS73 344 aa8.29□□□□□ -1.08
UBE2D3-224ENST00000508474 TCP11L1Q9NUJ3 509 aa8.29□□□□□ -1.08
UBE2D3-224ENST00000508474 PSMA7O14818 248 aa8.29□□□□□ -1.08
UBE2D3-224ENST00000508474 ATP8B2P98198 1209 aa8.29□□□□□ -1.08
UBE2D3-224ENST00000508474 PRPF4BQ13523 1007 aaKnown RBP8.29□□□□□ -1.08
UBE2D3-224ENST00000508474 SH2D4BQ5SQS7 431 aa8.29□□□□□ -1.08
UBE2D3-224ENST00000508474 IFT20Q8IY31 132 aa8.29□□□□□ -1.08
UBE2D3-224ENST00000508474 LRRC45Q96CN5 670 aa8.29□□□□□ -1.08
UBE2D3-224ENST00000508474 CALML4Q96GE6 196 aa8.29□□□□□ -1.08
UBE2D3-224ENST00000508474 JRKLQ9Y4A0 524 aa8.29□□□□□ -1.08
UBE2D3-224ENST00000508474 CAPN7Q9Y6W3 813 aa8.29□□□□□ -1.08
UBE2D3-224ENST00000508474 GOLGA8KD6RF30 607 aa8.29□□□□□ -1.08
UBE2D3-224ENST00000508474 LUC7L3O95232 432 aaKnown RBP8.29□□□□□ -1.08
UBE2D3-224ENST00000508474 ACTN2P35609 894 aa8.29□□□□□ -1.08
UBE2D3-224ENST00000508474 WHAMMP3Q1A5X7 153 aa8.29□□□□□ -1.08
UBE2D3-224ENST00000508474 NUTM2GQ5VZR2 741 aa8.29□□□□□ -1.08
UBE2D3-224ENST00000508474 EXOC4Q96A65 974 aa8.29□□□□□ -1.08
UBE2D3-224ENST00000508474 MRFAP1L1Q96HT8 127 aa8.29□□□□□ -1.08
UBE2D3-224ENST00000508474 MTRF1LQ9UGC7 380 aaKnown RBP8.29□□□□□ -1.08
UBE2D3-224ENST00000508474 PIK3R4Q99570 1358 aa8.29□□□□□ -1.08
UBE2D3-224ENST00000508474 CCDC194A0A1B0GVG4 234 aa8.29□□□□□ -1.08
UBE2D3-224ENST00000508474 PSDA5PKW4 1024 aaPredicted RBP8.29□□□□□ -1.08
UBE2D3-224ENST00000508474 BTBD11A6QL63 1104 aa8.29□□□□□ -1.08
UBE2D3-224ENST00000508474 CHMLP26374 656 aa8.29□□□□□ -1.08
UBE2D3-224ENST00000508474 CDC25BP30305 580 aa8.29□□□□□ -1.08
UBE2D3-224ENST00000508474 FANCCQ00597 558 aa8.29□□□□□ -1.08
UBE2D3-224ENST00000508474 TAF7Q15545 349 aaPredicted RBP8.29□□□□□ -1.08
UBE2D3-224ENST00000508474 MEX3CQ5U5Q3 659 aaKnown RBP8.29□□□□□ -1.08
UBE2D3-224ENST00000508474 CYP26C1Q6V0L0 522 aa8.29□□□□□ -1.08
UBE2D3-224ENST00000508474 INTS8Q75QN2 995 aaKnown RBP8.29□□□□□ -1.08
UBE2D3-224ENST00000508474 CCDC8Q9H0W5 538 aaPredicted RBP8.29□□□□□ -1.08
UBE2D3-224ENST00000508474 NAPBQ9H115 298 aa8.29□□□□□ -1.08
UBE2D3-224ENST00000508474 F6X3S4 739 aa8.28□□□□□ -1.08
UBE2D3-224ENST00000508474 CETN1Q12798 172 aa8.28□□□□□ -1.08
UBE2D3-224ENST00000508474 ERCC6LQ2NKX8 1250 aa8.28□□□□□ -1.08
UBE2D3-224ENST00000508474 CCDC122Q5T0U0 273 aa8.28□□□□□ -1.08
UBE2D3-224ENST00000508474 ZNF530Q6P9A1 599 aaPredicted RBP8.28□□□□□ -1.08
UBE2D3-224ENST00000508474 STMN2Q93045 179 aa8.28□□□□□ -1.08
UBE2D3-224ENST00000508474 BLMP54132 1417 aaPredicted RBP8.28□□□□□ -1.08
UBE2D3-224ENST00000508474 IFIT3O14879 490 aaKnown RBP8.28□□□□□ -1.08
UBE2D3-224ENST00000508474 PPP1R42Q7Z4L9 355 aa8.28□□□□□ -1.08
UBE2D3-224ENST00000508474 CTNNBL1Q8WYA6 563 aaPredicted RBP8.28□□□□□ -1.08
UBE2D3-224ENST00000508474 UBA7P41226 1012 aa8.28□□□□□ -1.08
UBE2D3-224ENST00000508474 TMTC1Q8IUR5 882 aa8.28□□□□□ -1.08
UBE2D3-224ENST00000508474 KIAA1524Q8TCG1 905 aa8.28□□□□□ -1.08
UBE2D3-224ENST00000508474 EXOC1Q9NV70 894 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms