RNA–Protein interactions for RNA: ENST00000507471.1

TSPAN17-206, Transcript of tetraspanin 17, humanhuman

TSL 3

Gene TSPAN17, Length 707 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-206ENST00000507471 RBM26Q5T8P6 1007 aaKnown RBP18.01■□□□□ 0.47
TSPAN17-206ENST00000507471 RGMBQ6NW40 437 aa18.01■□□□□ 0.47
TSPAN17-206ENST00000507471 GBA2Q9HCG7 927 aaPredicted RBP18.01■□□□□ 0.47
TSPAN17-206ENST00000507471 SCN9AQ15858 1988 aa18■□□□□ 0.47
TSPAN17-206ENST00000507471 SLC34A2O95436 690 aa18■□□□□ 0.47
TSPAN17-206ENST00000507471 RPS8P62241 208 aaKnown RBP18■□□□□ 0.47
TSPAN17-206ENST00000507471 DGKZQ13574 1117 aa18■□□□□ 0.47
TSPAN17-206ENST00000507471 DUSP27Q5VZP5 1158 aa18■□□□□ 0.47
TSPAN17-206ENST00000507471 DCPSQ96C86 337 aaKnown RBP18■□□□□ 0.47
TSPAN17-206ENST00000507471 CFAP44Q96MT7 982 aa18■□□□□ 0.47
TSPAN17-206ENST00000507471 POLR2AP24928 1970 aaKnown RBP17.99■□□□□ 0.47
TSPAN17-206ENST00000507471 WDR43Q15061 677 aaKnown RBP eCLIP17.99■□□□□ 0.47
TSPAN17-206ENST00000507471 KIF4BQ2VIQ3 1234 aa17.99■□□□□ 0.47
TSPAN17-206ENST00000507471 C2orf69Q8N8R5 385 aa17.99■□□□□ 0.47
TSPAN17-206ENST00000507471 ZC3H12CQ9C0D7 883 aaKnown RBP17.99■□□□□ 0.47
TSPAN17-206ENST00000507471 MBIPQ9NS73 344 aa17.99■□□□□ 0.47
TSPAN17-206ENST00000507471 PODXL2Q9NZ53 605 aa17.99■□□□□ 0.47
TSPAN17-206ENST00000507471 VIL1P09327 827 aaKnown RBP17.98■□□□□ 0.47
TSPAN17-206ENST00000507471 ZBTB38Q8NAP3 1195 aaPredicted RBP17.98■□□□□ 0.47
TSPAN17-206ENST00000507471 SEC31BQ9NQW1 1179 aa17.98■□□□□ 0.47
TSPAN17-206ENST00000507471 GGA3Q9NZ52 723 aa17.98■□□□□ 0.47
TSPAN17-206ENST00000507471 ADAMTS8Q9UP79 889 aa17.98■□□□□ 0.47
TSPAN17-206ENST00000507471 ASTN2O75129 1339 aaPredicted RBP17.98■□□□□ 0.47
TSPAN17-206ENST00000507471 RIC3Q7Z5B4 369 aa17.97■□□□□ 0.47
TSPAN17-206ENST00000507471 CCDC102AQ96A19 550 aa17.97■□□□□ 0.47
TSPAN17-206ENST00000507471 PHAXQ9H814 394 aaKnown RBP17.97■□□□□ 0.47
TSPAN17-206ENST00000507471 PSME4Q14997 1843 aa17.96■□□□□ 0.47
TSPAN17-206ENST00000507471 UFL1O94874 794 aa17.96■□□□□ 0.47
TSPAN17-206ENST00000507471 ZNF157P51786 506 aaPredicted RBP17.96■□□□□ 0.47
TSPAN17-206ENST00000507471 KIF23Q02241 960 aaPredicted RBP17.96■□□□□ 0.47
TSPAN17-206ENST00000507471 GOLGA2Q08379 1002 aa17.96■□□□□ 0.47
TSPAN17-206ENST00000507471 SAGE1Q9NXZ1 904 aa17.96■□□□□ 0.47
TSPAN17-206ENST00000507471 ANKIB1Q9P2G1 1089 aa17.96■□□□□ 0.47
TSPAN17-206ENST00000507471 ZNF609O15014 1411 aa17.96■□□□□ 0.47
TSPAN17-206ENST00000507471 G3V3G9 751 aa17.95■□□□□ 0.46
TSPAN17-206ENST00000507471 ZNF853P0CG23 659 aa17.95■□□□□ 0.46
TSPAN17-206ENST00000507471 DCAF8Q5TAQ9 597 aa17.95■□□□□ 0.46
TSPAN17-206ENST00000507471 SULF1Q8IWU6 871 aa17.95■□□□□ 0.46
TSPAN17-206ENST00000507471 MYD88Q99836 296 aa17.95■□□□□ 0.46
TSPAN17-206ENST00000507471 GGA1Q9UJY5 639 aa17.95■□□□□ 0.46
TSPAN17-206ENST00000507471 SLC10A3P09131 477 aa17.94■□□□□ 0.46
TSPAN17-206ENST00000507471 HSP90B1P14625 803 aaKnown RBP17.94■□□□□ 0.46
TSPAN17-206ENST00000507471 DDX10Q13206 875 aaKnown RBP17.94■□□□□ 0.46
TSPAN17-206ENST00000507471 CDCA5Q96FF9 252 aa17.94■□□□□ 0.46
TSPAN17-206ENST00000507471 PDE8AO60658 829 aa17.93■□□□□ 0.46
TSPAN17-206ENST00000507471 PCCAP05165 728 aaPredicted RBP17.93■□□□□ 0.46
TSPAN17-206ENST00000507471 ZNF280AP59817 542 aaPredicted RBP17.93■□□□□ 0.46
TSPAN17-206ENST00000507471 CCDC152Q4G0S7 254 aa17.93■□□□□ 0.46
TSPAN17-206ENST00000507471 RSBN1LQ6PCB5 846 aaPredicted RBP17.93■□□□□ 0.46
TSPAN17-206ENST00000507471 CCDC191Q8NCU4 936 aa17.93■□□□□ 0.46
TSPAN17-206ENST00000507471 AGBL3Q8NEM8 1001 aa17.93■□□□□ 0.46
TSPAN17-206ENST00000507471 RNF186Q9NXI6 227 aa17.93■□□□□ 0.46
TSPAN17-206ENST00000507471 ELL2O00472 640 aaPredicted RBP17.92■□□□□ 0.46
TSPAN17-206ENST00000507471 TRPA1O75762 1119 aa17.92■□□□□ 0.46
TSPAN17-206ENST00000507471 SCARF1Q14162 830 aa17.92■□□□□ 0.46
TSPAN17-206ENST00000507471 ANGEL2Q5VTE6 544 aaKnown RBP17.92■□□□□ 0.46
TSPAN17-206ENST00000507471 JARID2Q92833 1246 aaPredicted RBP17.92■□□□□ 0.46
TSPAN17-206ENST00000507471 CCDC85AQ96PX6 553 aaPredicted RBP17.92■□□□□ 0.46
TSPAN17-206ENST00000507471 CSRNP1Q96S65 589 aa17.91■□□□□ 0.46
TSPAN17-206ENST00000507471 GMLQ99445 158 aa17.91■□□□□ 0.46
TSPAN17-206ENST00000507471 IFT57Q9NWB7 429 aa17.91■□□□□ 0.46
TSPAN17-206ENST00000507471 CWC25Q9NXE8 425 aaPredicted RBP17.91■□□□□ 0.46
TSPAN17-206ENST00000507471 AKAP11Q9UKA4 1901 aa17.91■□□□□ 0.46
TSPAN17-206ENST00000507471 XDHP47989 1333 aa17.91■□□□□ 0.46
TSPAN17-206ENST00000507471 PAPPA2Q9BXP8 1791 aa17.91■□□□□ 0.46
TSPAN17-206ENST00000507471 ANKRD18AQ8IVF6 992 aa17.9■□□□□ 0.46
TSPAN17-206ENST00000507471 MYOZ2Q9NPC6 264 aa17.9■□□□□ 0.46
TSPAN17-206ENST00000507471 GNAI1P63096 354 aa17.89■□□□□ 0.45
TSPAN17-206ENST00000507471 RASAL3Q86YV0 1011 aa17.89■□□□□ 0.45
TSPAN17-206ENST00000507471 METTL22Q9BUU2 404 aaPredicted RBP17.89■□□□□ 0.45
TSPAN17-206ENST00000507471 ZNF646O15015 1829 aaPredicted RBP17.88■□□□□ 0.45
TSPAN17-206ENST00000507471 SPEF2Q9C093 1822 aa17.88■□□□□ 0.45
TSPAN17-206ENST00000507471 USP17L3A6NCW0 530 aa17.88■□□□□ 0.45
TSPAN17-206ENST00000507471 USP17L4A6NCW7 530 aa17.88■□□□□ 0.45
TSPAN17-206ENST00000507471 APAF1O14727 1248 aa17.88■□□□□ 0.45
TSPAN17-206ENST00000507471 USP17L8P0C7I0 530 aa17.88■□□□□ 0.45
TSPAN17-206ENST00000507471 ATP2B4P23634 1241 aa17.88■□□□□ 0.45
TSPAN17-206ENST00000507471 USP17L1Q7RTZ2 530 aa17.88■□□□□ 0.45
TSPAN17-206ENST00000507471 PODNQ7Z5L7 613 aa17.88■□□□□ 0.45
TSPAN17-206ENST00000507471 C8orf58Q8NAV2 365 aa17.88■□□□□ 0.45
TSPAN17-206ENST00000507471 PITPNM2Q9BZ72 1349 aa17.88■□□□□ 0.45
TSPAN17-206ENST00000507471 WTIPA6NIX2 430 aaPredicted RBP17.87■□□□□ 0.45
TSPAN17-206ENST00000507471 DDX58O95786 925 aaKnown RBP17.87■□□□□ 0.45
TSPAN17-206ENST00000507471 FKBP1BP68106 108 aa17.87■□□□□ 0.45
TSPAN17-206ENST00000507471 CALD1Q05682 793 aaKnown RBP17.87■□□□□ 0.45
TSPAN17-206ENST00000507471 SCAF8Q9UPN6 1271 aaKnown RBP17.87■□□□□ 0.45
TSPAN17-206ENST00000507471 CTSWP56202 376 aa17.86■□□□□ 0.45
TSPAN17-206ENST00000507471 CCDC30Q5VVM6 783 aa17.86■□□□□ 0.45
TSPAN17-206ENST00000507471 MOB2Q70IA6 237 aa17.86■□□□□ 0.45
TSPAN17-206ENST00000507471 REM2Q8IYK8 340 aaPredicted RBP17.86■□□□□ 0.45
TSPAN17-206ENST00000507471 MAP3K2Q9Y2U5 619 aa17.86■□□□□ 0.45
TSPAN17-206ENST00000507471 MED23Q9ULK4 1368 aa17.86■□□□□ 0.45
TSPAN17-206ENST00000507471 IGKV5-2P06315 115 aa17.85■□□□□ 0.45
TSPAN17-206ENST00000507471 MYH3P11055 1940 aa17.85■□□□□ 0.45
TSPAN17-206ENST00000507471 SOX10P56693 466 aa17.85■□□□□ 0.45
TSPAN17-206ENST00000507471 CDC5LQ99459 802 aaKnown RBP17.85■□□□□ 0.45
TSPAN17-206ENST00000507471 NBPF9Q3BBW0 867 aa17.84■□□□□ 0.45
TSPAN17-206ENST00000507471 PRAMEF18Q5VWM3 479 aa17.84■□□□□ 0.45
TSPAN17-206ENST00000507471 CTU1Q7Z7A3 348 aaKnown RBP17.84■□□□□ 0.45
TSPAN17-206ENST00000507471 TSPYL6Q8N831 410 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms