RNA–Protein interactions for RNA: ENST00000505831.1

SUDS3P1-201, Transcript of SDS3 homolog, SIN3A corepressor complex component pseudogene 1, humanhuman

BASIC

Gene SUDS3P1, Length 966 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3P1-201ENST00000505831 KCNQ5Q9NR82 932 aa28.51■■■□□ 2.15
SUDS3P1-201ENST00000505831 WDR63Q8IWG1 891 aa28.5■■■□□ 2.15
SUDS3P1-201ENST00000505831 GPR101Q96P66 508 aaPredicted RBP28.5■■■□□ 2.15
SUDS3P1-201ENST00000505831 ZBTB12Q9Y330 459 aaPredicted RBP28.5■■■□□ 2.15
SUDS3P1-201ENST00000505831 TRPM4Q8TD43 1214 aa28.49■■■□□ 2.15
SUDS3P1-201ENST00000505831 WBP1LQ9NX94 342 aa28.49■■■□□ 2.15
SUDS3P1-201ENST00000505831 ABT1Q9ULW3 272 aaKnown RBP28.49■■■□□ 2.15
SUDS3P1-201ENST00000505831 RTL9Q8NET4 1388 aa28.49■■■□□ 2.15
SUDS3P1-201ENST00000505831 FANCIQ9NVI1 1328 aa28.48■■■□□ 2.15
SUDS3P1-201ENST00000505831 THSD7BQ9C0I4 1608 aa28.48■■■□□ 2.15
SUDS3P1-201ENST00000505831 NEURL1BA8MQ27 555 aa28.48■■■□□ 2.15
SUDS3P1-201ENST00000505831 H7C1W4 665 aa28.48■■■□□ 2.15
SUDS3P1-201ENST00000505831 FOXN1O15353 648 aa28.48■■■□□ 2.15
SUDS3P1-201ENST00000505831 ECE2O60344 883 aa28.48■■■□□ 2.15
SUDS3P1-201ENST00000505831 DOK7Q18PE1 504 aa28.48■■■□□ 2.15
SUDS3P1-201ENST00000505831 CWF19L2Q2TBE0 894 aaKnown RBP28.48■■■□□ 2.15
SUDS3P1-201ENST00000505831 TTLL11Q8NHH1 800 aa28.48■■■□□ 2.15
SUDS3P1-201ENST00000505831 CCDC85AQ96PX6 553 aaPredicted RBP28.48■■■□□ 2.15
SUDS3P1-201ENST00000505831 ZC3H12CQ9C0D7 883 aaKnown RBP28.48■■■□□ 2.15
SUDS3P1-201ENST00000505831 WDR33Q9C0J8 1336 aaKnown RBP28.47■■■□□ 2.15
SUDS3P1-201ENST00000505831 H7C1D1 291 aa28.47■■■□□ 2.15
SUDS3P1-201ENST00000505831 VAMP4O75379 141 aa28.47■■■□□ 2.15
SUDS3P1-201ENST00000505831 NEXNQ0ZGT2 675 aa28.47■■■□□ 2.15
SUDS3P1-201ENST00000505831 MICALL2Q8IY33 904 aa28.47■■■□□ 2.15
SUDS3P1-201ENST00000505831 CTSWP56202 376 aa28.46■■■□□ 2.15
SUDS3P1-201ENST00000505831 GLIS2Q9BZE0 524 aaPredicted RBP28.46■■■□□ 2.15
SUDS3P1-201ENST00000505831 VIL1P09327 827 aaKnown RBP28.45■■■□□ 2.14
SUDS3P1-201ENST00000505831 RPS12P25398 132 aaKnown RBP28.45■■■□□ 2.14
SUDS3P1-201ENST00000505831 ANKRD18AQ8IVF6 992 aa28.45■■■□□ 2.14
SUDS3P1-201ENST00000505831 TNS4Q8IZW8 715 aa28.45■■■□□ 2.14
SUDS3P1-201ENST00000505831 ANKIB1Q9P2G1 1089 aa28.45■■■□□ 2.14
SUDS3P1-201ENST00000505831 GGA1Q9UJY5 639 aa28.45■■■□□ 2.14
SUDS3P1-201ENST00000505831 TLL2Q9Y6L7 1015 aa28.45■■■□□ 2.14
SUDS3P1-201ENST00000505831 ZNF646O15015 1829 aaPredicted RBP28.45■■■□□ 2.14
SUDS3P1-201ENST00000505831 UFL1O94874 794 aa28.44■■■□□ 2.14
SUDS3P1-201ENST00000505831 FLIIQ13045 1269 aa28.44■■■□□ 2.14
SUDS3P1-201ENST00000505831 CDC37L1Q7L3B6 337 aa28.43■■■□□ 2.14
SUDS3P1-201ENST00000505831 SAMD7Q7Z3H4 446 aa28.43■■■□□ 2.14
SUDS3P1-201ENST00000505831 XDHP47989 1333 aa28.43■■■□□ 2.14
SUDS3P1-201ENST00000505831 EGFRP00533 1210 aa28.42■■■□□ 2.14
SUDS3P1-201ENST00000505831 CDC5LQ99459 802 aaKnown RBP28.42■■■□□ 2.14
SUDS3P1-201ENST00000505831 GREM2Q9H772 168 aa28.42■■■□□ 2.14
SUDS3P1-201ENST00000505831 SALL2Q9Y467 1007 aaPredicted RBP28.42■■■□□ 2.14
SUDS3P1-201ENST00000505831 CASP7P55210 303 aa28.41■■■□□ 2.14
SUDS3P1-201ENST00000505831 EXOSC9Q06265 439 aaKnown RBP28.41■■■□□ 2.14
SUDS3P1-201ENST00000505831 GCKRQ14397 625 aa28.41■■■□□ 2.14
SUDS3P1-201ENST00000505831 SAPCD2Q86UD0 394 aa28.41■■■□□ 2.14
SUDS3P1-201ENST00000505831 PLA2G12BQ9BX93 195 aa28.41■■■□□ 2.14
SUDS3P1-201ENST00000505831 SPINK5Q9NQ38 1064 aaPredicted RBP28.41■■■□□ 2.14
SUDS3P1-201ENST00000505831 PRDM10Q9NQV6 1147 aa28.41■■■□□ 2.14
SUDS3P1-201ENST00000505831 BSDC1Q9NW68 430 aaPredicted RBP28.41■■■□□ 2.14
SUDS3P1-201ENST00000505831 ZNF609O15014 1411 aa28.41■■■□□ 2.14
SUDS3P1-201ENST00000505831 CELF2O95319 508 aaKnown RBP28.4■■■□□ 2.14
SUDS3P1-201ENST00000505831 UBE3BQ7Z3V4 1068 aa28.4■■■□□ 2.14
SUDS3P1-201ENST00000505831 DNAAF4Q8WXU2 420 aa28.4■■■□□ 2.14
SUDS3P1-201ENST00000505831 CAPNS2Q96L46 248 aa28.4■■■□□ 2.14
SUDS3P1-201ENST00000505831 MINPP1Q9UNW1 487 aa28.4■■■□□ 2.14
SUDS3P1-201ENST00000505831 WTIPA6NIX2 430 aaPredicted RBP28.39■■■□□ 2.14
SUDS3P1-201ENST00000505831 ATP2B4P23634 1241 aa28.39■■■□□ 2.14
SUDS3P1-201ENST00000505831 CTCFP49711 727 aaPredicted RBP28.39■■■□□ 2.14
SUDS3P1-201ENST00000505831 ECE1P42892 770 aa28.38■■■□□ 2.13
SUDS3P1-201ENST00000505831 MAP2K1Q02750 393 aaPredicted RBP28.38■■■□□ 2.13
SUDS3P1-201ENST00000505831 FKBP5Q13451 457 aaPredicted RBP28.38■■■□□ 2.13
SUDS3P1-201ENST00000505831 TBC1D10BQ4KMP7 808 aaPredicted RBP28.38■■■□□ 2.13
SUDS3P1-201ENST00000505831 CYP4F22Q6NT55 531 aa28.38■■■□□ 2.13
SUDS3P1-201ENST00000505831 LINS1Q8NG48 757 aa28.38■■■□□ 2.13
SUDS3P1-201ENST00000505831 HHIPL1Q96JK4 782 aa28.38■■■□□ 2.13
SUDS3P1-201ENST00000505831 CSF1RP07333 972 aa28.37■■■□□ 2.13
SUDS3P1-201ENST00000505831 AIDAQ96BJ3 306 aa28.37■■■□□ 2.13
SUDS3P1-201ENST00000505831 USP48Q86UV5 1035 aa28.36■■■□□ 2.13
SUDS3P1-201ENST00000505831 GMLQ99445 158 aa28.36■■■□□ 2.13
SUDS3P1-201ENST00000505831 A0A1B0GUL6 1792 aa28.35■■■□□ 2.13
SUDS3P1-201ENST00000505831 G3V3G9 751 aa28.35■■■□□ 2.13
SUDS3P1-201ENST00000505831 DCAF8Q5TAQ9 597 aa28.35■■■□□ 2.13
SUDS3P1-201ENST00000505831 AGBL3Q8NEM8 1001 aa28.35■■■□□ 2.13
SUDS3P1-201ENST00000505831 ZNF280AP59817 542 aaPredicted RBP28.34■■■□□ 2.13
SUDS3P1-201ENST00000505831 RSBN1LQ6PCB5 846 aaPredicted RBP28.34■■■□□ 2.13
SUDS3P1-201ENST00000505831 DLK2Q6UY11 383 aa28.34■■■□□ 2.13
SUDS3P1-201ENST00000505831 PODNQ7Z5L7 613 aa28.34■■■□□ 2.13
SUDS3P1-201ENST00000505831 MYH16Q9H6N6 1097 aa28.34■■■□□ 2.13
SUDS3P1-201ENST00000505831 MAP2K2P36507 400 aa28.33■■■□□ 2.13
SUDS3P1-201ENST00000505831 RBM26Q5T8P6 1007 aaKnown RBP28.33■■■□□ 2.13
SUDS3P1-201ENST00000505831 MED23Q9ULK4 1368 aa28.33■■■□□ 2.13
SUDS3P1-201ENST00000505831 CCT4P50991 539 aaKnown RBP28.32■■■□□ 2.12
SUDS3P1-201ENST00000505831 LBX1P52954 281 aa28.32■■■□□ 2.12
SUDS3P1-201ENST00000505831 FAM9BQ8IZU0 186 aa28.32■■■□□ 2.12
SUDS3P1-201ENST00000505831 HSPA8P11142 646 aaKnown RBP28.31■■■□□ 2.12
SUDS3P1-201ENST00000505831 ITGA6P23229 1130 aa28.31■■■□□ 2.12
SUDS3P1-201ENST00000505831 KIF4BQ2VIQ3 1234 aa28.31■■■□□ 2.12
SUDS3P1-201ENST00000505831 PAXIP1Q6ZW49 1069 aaPredicted RBP28.31■■■□□ 2.12
SUDS3P1-201ENST00000505831 KRT26Q7Z3Y9 468 aa28.31■■■□□ 2.12
SUDS3P1-201ENST00000505831 BEND3Q5T5X7 828 aa28.3■■■□□ 2.12
SUDS3P1-201ENST00000505831 ZNF408Q9H9D4 720 aa28.3■■■□□ 2.12
SUDS3P1-201ENST00000505831 LEMD3Q9Y2U8 911 aa28.3■■■□□ 2.12
SUDS3P1-201ENST00000505831 ZNF521Q96K83 1311 aa28.29■■■□□ 2.12
SUDS3P1-201ENST00000505831 USP17L3A6NCW0 530 aa28.29■■■□□ 2.12
SUDS3P1-201ENST00000505831 USP17L4A6NCW7 530 aa28.29■■■□□ 2.12
SUDS3P1-201ENST00000505831 FAM161AQ3B820 660 aa28.29■■■□□ 2.12
SUDS3P1-201ENST00000505831 USP17L1Q7RTZ2 530 aa28.29■■■□□ 2.12
SUDS3P1-201ENST00000505831 DCPSQ96C86 337 aaKnown RBP28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms