RNA–Protein interactions for RNA: ENST00000502908.2

SCARB2-203, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 2,552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-203ENST00000502908 FBXW7Q969H0 707 aa21.97■■□□□ 1.11
SCARB2-203ENST00000502908 JCADQ9P266 1359 aa21.97■■□□□ 1.11
SCARB2-203ENST00000502908 SIPA1L3O60292 1781 aaPredicted RBP21.97■■□□□ 1.11
SCARB2-203ENST00000502908 SLC52A2Q9HAB3 445 aa21.97■■□□□ 1.11
SCARB2-203ENST00000502908 TSGA10IPQ3SY00 556 aa21.96■■□□□ 1.11
SCARB2-203ENST00000502908 NCOA5Q9HCD5 579 aaKnown RBP21.96■■□□□ 1.11
SCARB2-203ENST00000502908 APOBRQ0VD83 1088 aa21.96■■□□□ 1.11
SCARB2-203ENST00000502908 CCDC144BQ3MJ40 725 aa21.96■■□□□ 1.11
SCARB2-203ENST00000502908 CCDC144CPQ8IYA2 1237 aa21.96■■□□□ 1.11
SCARB2-203ENST00000502908 ALDH8A1Q9H2A2 487 aaPredicted RBP21.96■■□□□ 1.11
SCARB2-203ENST00000502908 COPRSQ9NQ92 184 aa21.96■■□□□ 1.11
SCARB2-203ENST00000502908 KDM6AO15550 1401 aaPredicted RBP21.96■■□□□ 1.11
SCARB2-203ENST00000502908 A0A087WZG4 1122 aa21.95■■□□□ 1.11
SCARB2-203ENST00000502908 TPM3P06753 285 aa21.95■■□□□ 1.11
SCARB2-203ENST00000502908 ATP2B3Q16720 1220 aa21.95■■□□□ 1.11
SCARB2-203ENST00000502908 NEUROD6Q96NK8 337 aa21.95■■□□□ 1.11
SCARB2-203ENST00000502908 SPDYE4A6NLX3 237 aa21.95■■□□□ 1.1
SCARB2-203ENST00000502908 ARID5BQ14865 1188 aa21.95■■□□□ 1.1
SCARB2-203ENST00000502908 ZSCAN25Q6NSZ9 544 aa21.95■■□□□ 1.1
SCARB2-203ENST00000502908 C11orf57Q6ZUT1 292 aaPredicted RBP21.95■■□□□ 1.1
SCARB2-203ENST00000502908 ANKLE2Q86XL3 938 aa21.95■■□□□ 1.1
SCARB2-203ENST00000502908 PLA2G4DQ86XP0 818 aa21.95■■□□□ 1.1
SCARB2-203ENST00000502908 RAPGEF4Q8WZA2 1011 aa21.95■■□□□ 1.1
SCARB2-203ENST00000502908 KRT32Q14532 448 aa21.94■■□□□ 1.1
SCARB2-203ENST00000502908 MCMDC2Q4G0Z9 681 aa21.94■■□□□ 1.1
SCARB2-203ENST00000502908 RBM43Q6ZSC3 357 aaKnown RBP21.94■■□□□ 1.1
SCARB2-203ENST00000502908 CLIP2Q9UDT6 1046 aa21.94■■□□□ 1.1
SCARB2-203ENST00000502908 ERBB3P21860 1342 aa21.94■■□□□ 1.1
SCARB2-203ENST00000502908 GOLIM4O00461 696 aa21.94■■□□□ 1.1
SCARB2-203ENST00000502908 CACTINQ8WUQ7 758 aaKnown RBP21.94■■□□□ 1.1
SCARB2-203ENST00000502908 TDRD7Q8NHU6 1098 aaKnown RBP21.93■■□□□ 1.1
SCARB2-203ENST00000502908 DDX17Q92841 729 aaKnown RBP21.93■■□□□ 1.1
SCARB2-203ENST00000502908 GOLPH3LQ9H4A5 285 aa21.93■■□□□ 1.1
SCARB2-203ENST00000502908 OVOS2A0A0G2JMS6 1433 aa21.93■■□□□ 1.1
SCARB2-203ENST00000502908 TIMM10P62072 90 aa21.93■■□□□ 1.1
SCARB2-203ENST00000502908 LMBR1LQ6UX01 489 aa21.93■■□□□ 1.1
SCARB2-203ENST00000502908 PRDM4Q9UKN5 801 aa21.93■■□□□ 1.1
SCARB2-203ENST00000502908 U3KPZ7 1027 aaPredicted RBP21.93■■□□□ 1.1
SCARB2-203ENST00000502908 PHRF1Q9P1Y6 1649 aaKnown RBP21.92■■□□□ 1.1
SCARB2-203ENST00000502908 CTDNEP1O95476 244 aa21.92■■□□□ 1.1
SCARB2-203ENST00000502908 LRP10Q7Z4F1 713 aa21.92■■□□□ 1.1
SCARB2-203ENST00000502908 MRC1P22897 1456 aa21.92■■□□□ 1.1
SCARB2-203ENST00000502908 PDIA4P13667 645 aaKnown RBP21.92■■□□□ 1.1
SCARB2-203ENST00000502908 NAA30Q147X3 362 aaPredicted RBP21.92■■□□□ 1.1
SCARB2-203ENST00000502908 KRT28Q7Z3Y7 464 aa21.92■■□□□ 1.1
SCARB2-203ENST00000502908 CCAR1Q8IX12 1150 aaKnown RBP21.92■■□□□ 1.1
SCARB2-203ENST00000502908 NSUN7Q8NE18 718 aaKnown RBP21.92■■□□□ 1.1
SCARB2-203ENST00000502908 HAUS7Q99871 368 aa21.92■■□□□ 1.1
SCARB2-203ENST00000502908 PTPDC1A2A3K4 754 aa21.91■■□□□ 1.1
SCARB2-203ENST00000502908 PHKG2P15735 406 aa21.91■■□□□ 1.1
SCARB2-203ENST00000502908 ADD1P35611 737 aaKnown RBP21.91■■□□□ 1.1
SCARB2-203ENST00000502908 PDCL2Q8N4E4 241 aa21.91■■□□□ 1.1
SCARB2-203ENST00000502908 TTC5Q8N0Z6 440 aa21.91■■□□□ 1.1
SCARB2-203ENST00000502908 USP28Q96RU2 1077 aa21.91■■□□□ 1.1
SCARB2-203ENST00000502908 AFDNP55196 1824 aaKnown RBP21.9■■□□□ 1.1
SCARB2-203ENST00000502908 U2AF2P26368 475 aaKnown RBP eCLIP21.9■■□□□ 1.1
SCARB2-203ENST00000502908 ZNF592Q92610 1267 aa21.9■■□□□ 1.1
SCARB2-203ENST00000502908 CFAP45Q9UL16 551 aa21.9■■□□□ 1.1
SCARB2-203ENST00000502908 LAMA4Q16363 1823 aa21.89■■□□□ 1.09
SCARB2-203ENST00000502908 TNNT1P13805 278 aa21.89■■□□□ 1.09
SCARB2-203ENST00000502908 KBTBD3Q8NAB2 608 aa21.89■■□□□ 1.09
SCARB2-203ENST00000502908 GOLGA6L19H0YKK7 550 aa21.88■■□□□ 1.09
SCARB2-203ENST00000502908 CSB-PGBD3P0DP91 1061 aa21.88■■□□□ 1.09
SCARB2-203ENST00000502908 TTLL5Q6EMB2 1281 aa21.88■■□□□ 1.09
SCARB2-203ENST00000502908 SMAP1Q8IYB5 467 aaPredicted RBP21.88■■□□□ 1.09
SCARB2-203ENST00000502908 KLHL34Q8N239 644 aa21.88■■□□□ 1.09
SCARB2-203ENST00000502908 SMARCC2Q8TAQ2 1214 aa21.88■■□□□ 1.09
SCARB2-203ENST00000502908 CABLES1Q8TDN4 633 aa21.88■■□□□ 1.09
SCARB2-203ENST00000502908 ZNF594Q96JF6 807 aaPredicted RBP21.88■■□□□ 1.09
SCARB2-203ENST00000502908 ZSCAN16Q9H4T2 348 aaPredicted RBP21.88■■□□□ 1.09
SCARB2-203ENST00000502908 GPHNQ9NQX3 736 aaPredicted RBP21.88■■□□□ 1.09
SCARB2-203ENST00000502908 SLIT3O75094 1523 aa21.88■■□□□ 1.09
SCARB2-203ENST00000502908 SNRPA1P09661 255 aaKnown RBP21.88■■□□□ 1.09
SCARB2-203ENST00000502908 IQCB1Q15051 598 aa21.88■■□□□ 1.09
SCARB2-203ENST00000502908 DHX32Q7L7V1 743 aaKnown RBP21.88■■□□□ 1.09
SCARB2-203ENST00000502908 TAOK2Q9UL54 1235 aa21.88■■□□□ 1.09
SCARB2-203ENST00000502908 USP27XA6NNY8 438 aa21.87■■□□□ 1.09
SCARB2-203ENST00000502908 PFKFB2O60825 505 aa21.87■■□□□ 1.09
SCARB2-203ENST00000502908 TATP17735 454 aaPredicted RBP21.87■■□□□ 1.09
SCARB2-203ENST00000502908 CHRNA2Q15822 529 aa21.87■■□□□ 1.09
SCARB2-203ENST00000502908 TPD52L1Q16890 204 aaPredicted RBP21.87■■□□□ 1.09
SCARB2-203ENST00000502908 RABL6Q3YEC7 729 aaPredicted RBP21.87■■□□□ 1.09
SCARB2-203ENST00000502908 OTUD7BQ6GQQ9 843 aa21.87■■□□□ 1.09
SCARB2-203ENST00000502908 RAB11FIP4Q86YS3 637 aa21.87■■□□□ 1.09
SCARB2-203ENST00000502908 ZHX1Q9UKY1 873 aaPredicted RBP21.87■■□□□ 1.09
SCARB2-203ENST00000502908 MEGF6O75095 1541 aa21.87■■□□□ 1.09
SCARB2-203ENST00000502908 PAG1Q9NWQ8 432 aa21.87■■□□□ 1.09
SCARB2-203ENST00000502908 FILIP1Q7Z7B0 1213 aa21.86■■□□□ 1.09
SCARB2-203ENST00000502908 ME1P48163 572 aa21.86■■□□□ 1.09
SCARB2-203ENST00000502908 SNW1Q13573 536 aaKnown RBP21.86■■□□□ 1.09
SCARB2-203ENST00000502908 CYP27B1O15528 508 aa21.85■■□□□ 1.09
SCARB2-203ENST00000502908 LRRC24Q50LG9 513 aa21.85■■□□□ 1.09
SCARB2-203ENST00000502908 E7EWF7 191 aa21.85■■□□□ 1.09
SCARB2-203ENST00000502908 CTIFO43310 598 aaKnown RBP21.85■■□□□ 1.09
SCARB2-203ENST00000502908 NCBP1Q09161 790 aaKnown RBP21.85■■□□□ 1.09
SCARB2-203ENST00000502908 ILDR1Q86SU0 546 aaPredicted RBP21.85■■□□□ 1.09
SCARB2-203ENST00000502908 SCN11AQ9UI33 1791 aa21.84■■□□□ 1.09
SCARB2-203ENST00000502908 HSPD1P10809 573 aaKnown RBP21.84■■□□□ 1.09
SCARB2-203ENST00000502908 CASP7P55210 303 aa21.84■■□□□ 1.09
SCARB2-203ENST00000502908 HSP90AB3PQ58FF7 597 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 175.9 ms