RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.07□□□□□ -1.12
HMGB1P3-201ENST00000502802 RGS20O76081 388 aa8.06□□□□□ -1.12
HMGB1P3-201ENST00000502802 GJA8P48165 433 aa8.06□□□□□ -1.12
HMGB1P3-201ENST00000502802 FCGRTP55899 365 aa8.06□□□□□ -1.12
HMGB1P3-201ENST00000502802 TNP2Q05952 138 aa8.06□□□□□ -1.12
HMGB1P3-201ENST00000502802 PAK2Q13177 524 aa8.06□□□□□ -1.12
HMGB1P3-201ENST00000502802 PRPF40BQ6NWY9 871 aaKnown RBP8.06□□□□□ -1.12
HMGB1P3-201ENST00000502802 RIPOR1Q6ZS17 1223 aa8.06□□□□□ -1.12
HMGB1P3-201ENST00000502802 C3orf58Q8NDZ4 430 aa8.06□□□□□ -1.12
HMGB1P3-201ENST00000502802 PNMA5Q96PV4 448 aa8.06□□□□□ -1.12
HMGB1P3-201ENST00000502802 RSRP1Q9BUV0 290 aa8.06□□□□□ -1.12
HMGB1P3-201ENST00000502802 EFCC1Q9HA90 598 aa8.06□□□□□ -1.12
HMGB1P3-201ENST00000502802 LIN7BQ9HAP6 207 aa8.06□□□□□ -1.12
HMGB1P3-201ENST00000502802 ZFATQ9P243 1243 aa8.06□□□□□ -1.12
HMGB1P3-201ENST00000502802 DCDC2BA2VCK2 349 aa8.05□□□□□ -1.12
HMGB1P3-201ENST00000502802 AXIN1O15169 862 aa8.05□□□□□ -1.12
HMGB1P3-201ENST00000502802 MAN1A2O60476 641 aa8.05□□□□□ -1.12
HMGB1P3-201ENST00000502802 DGAT1O75907 488 aa8.05□□□□□ -1.12
HMGB1P3-201ENST00000502802 PSAPP07602 524 aa8.05□□□□□ -1.12
HMGB1P3-201ENST00000502802 THBS1P07996 1170 aa8.05□□□□□ -1.12
HMGB1P3-201ENST00000502802 XRCC5P13010 732 aaKnown RBP8.05□□□□□ -1.12
HMGB1P3-201ENST00000502802 PWP1Q13610 501 aa8.05□□□□□ -1.12
HMGB1P3-201ENST00000502802 ANKRD24Q8TF21 1146 aa8.05□□□□□ -1.12
HMGB1P3-201ENST00000502802 OXCT2Q9BYC2 517 aaPredicted RBP8.05□□□□□ -1.12
HMGB1P3-201ENST00000502802 NUCKS1Q9H1E3 243 aaKnown RBP8.05□□□□□ -1.12
HMGB1P3-201ENST00000502802 KBTBD4Q9NVX7 518 aa8.05□□□□□ -1.12
HMGB1P3-201ENST00000502802 PPM1HQ9ULR3 514 aa8.05□□□□□ -1.12
HMGB1P3-201ENST00000502802 TMEM238LA0A1B0GVL6 79 aa8.04□□□□□ -1.12
HMGB1P3-201ENST00000502802 H7C1W4 665 aa8.04□□□□□ -1.12
HMGB1P3-201ENST00000502802 SMARCA5O60264 1052 aaPredicted RBP8.04□□□□□ -1.12
HMGB1P3-201ENST00000502802 KIF4AO95239 1232 aa8.04□□□□□ -1.12
HMGB1P3-201ENST00000502802 MAPTP10636 758 aaKnown RBP8.04□□□□□ -1.12
HMGB1P3-201ENST00000502802 SOX18P35713 384 aa8.04□□□□□ -1.12
HMGB1P3-201ENST00000502802 UBAP2LQ14157 1087 aaKnown RBP8.04□□□□□ -1.12
HMGB1P3-201ENST00000502802 CCDC85BQ15834 202 aaPredicted RBP8.04□□□□□ -1.12
HMGB1P3-201ENST00000502802 PKDCCQ504Y2 493 aa8.04□□□□□ -1.12
HMGB1P3-201ENST00000502802 RELL1Q8IUW5 271 aa8.04□□□□□ -1.12
HMGB1P3-201ENST00000502802 SPATA32Q96LK8 384 aa8.04□□□□□ -1.12
HMGB1P3-201ENST00000502802 LNPKQ9C0E8 428 aa8.04□□□□□ -1.12
HMGB1P3-201ENST00000502802 STRN4Q9NRL3 753 aa8.04□□□□□ -1.12
HMGB1P3-201ENST00000502802 TLR7Q9NYK1 1049 aaKnown RBP8.04□□□□□ -1.12
HMGB1P3-201ENST00000502802 MARK1Q9P0L2 795 aa8.04□□□□□ -1.12
HMGB1P3-201ENST00000502802 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.04□□□□□ -1.12
HMGB1P3-201ENST00000502802 SLC35F4A4IF30 521 aa8.03□□□□□ -1.12
HMGB1P3-201ENST00000502802 ATF4P18848 351 aaPredicted RBP8.03□□□□□ -1.12
HMGB1P3-201ENST00000502802 NFKB1P19838 968 aa8.03□□□□□ -1.12
HMGB1P3-201ENST00000502802 CANXP27824 592 aaKnown RBP8.03□□□□□ -1.12
HMGB1P3-201ENST00000502802 RBL2Q08999 1139 aa8.03□□□□□ -1.12
HMGB1P3-201ENST00000502802 HYAL2Q12891 473 aa8.03□□□□□ -1.12
HMGB1P3-201ENST00000502802 DTHD1Q6ZMT9 781 aa8.03□□□□□ -1.12
HMGB1P3-201ENST00000502802 NCAPG2Q86XI2 1143 aa8.03□□□□□ -1.12
HMGB1P3-201ENST00000502802 MCF2L2Q86YR7 1114 aa8.03□□□□□ -1.12
HMGB1P3-201ENST00000502802 CRIPAKQ8N1N5 446 aa8.03□□□□□ -1.12
HMGB1P3-201ENST00000502802 GPRASP2Q96D09 838 aa8.03□□□□□ -1.12
HMGB1P3-201ENST00000502802 TCF12Q99081 682 aa8.03□□□□□ -1.12
HMGB1P3-201ENST00000502802 ABCB6Q9NP58 842 aa8.03□□□□□ -1.12
HMGB1P3-201ENST00000502802 AKAP2Q9Y2D5 859 aa8.03□□□□□ -1.12
HMGB1P3-201ENST00000502802 BNIP3LO60238 219 aa8.02□□□□□ -1.13
HMGB1P3-201ENST00000502802 MAP3K6O95382 1288 aa8.02□□□□□ -1.13
HMGB1P3-201ENST00000502802 FGRP09769 529 aa8.02□□□□□ -1.13
HMGB1P3-201ENST00000502802 RLBP1P12271 317 aa8.02□□□□□ -1.13
HMGB1P3-201ENST00000502802 PTSQ03393 145 aa8.02□□□□□ -1.13
HMGB1P3-201ENST00000502802 PLAURQ03405 335 aa8.02□□□□□ -1.13
HMGB1P3-201ENST00000502802 SPEM2Q0P670 501 aa8.02□□□□□ -1.13
HMGB1P3-201ENST00000502802 COL13A1Q5TAT6 717 aaPredicted RBP8.02□□□□□ -1.13
HMGB1P3-201ENST00000502802 CCNJLQ8IV13 435 aa8.02□□□□□ -1.13
HMGB1P3-201ENST00000502802 RASGRP4Q8TDF6 673 aa8.02□□□□□ -1.13
HMGB1P3-201ENST00000502802 OSMRQ99650 979 aa8.02□□□□□ -1.13
HMGB1P3-201ENST00000502802 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.02□□□□□ -1.13
HMGB1P3-201ENST00000502802 ZKSCAN3Q9BRR0 538 aa8.02□□□□□ -1.13
HMGB1P3-201ENST00000502802 SPON2Q9BUD6 331 aa8.02□□□□□ -1.13
HMGB1P3-201ENST00000502802 HIRIP3Q9BW71 556 aaPredicted RBP8.02□□□□□ -1.13
HMGB1P3-201ENST00000502802 ZFYVE1Q9HBF4 777 aa8.02□□□□□ -1.13
HMGB1P3-201ENST00000502802 HOXD8P13378 290 aaPredicted RBP8.01□□□□□ -1.13
HMGB1P3-201ENST00000502802 MAP3K10Q02779 954 aa8.01□□□□□ -1.13
HMGB1P3-201ENST00000502802 DBN1Q16643 649 aa8.01□□□□□ -1.13
HMGB1P3-201ENST00000502802 SOGA3Q5TF21 947 aa8.01□□□□□ -1.13
HMGB1P3-201ENST00000502802 SV2BQ7L1I2 683 aa8.01□□□□□ -1.13
HMGB1P3-201ENST00000502802 CNTNAP3BQ96NU0 1288 aa8.01□□□□□ -1.13
HMGB1P3-201ENST00000502802 PUS7Q96PZ0 661 aaKnown RBP8.01□□□□□ -1.13
HMGB1P3-201ENST00000502802 TRIM56Q9BRZ2 755 aaKnown RBP8.01□□□□□ -1.13
HMGB1P3-201ENST00000502802 CNTNAP3Q9BZ76 1288 aa8.01□□□□□ -1.13
HMGB1P3-201ENST00000502802 NDFIP2Q9NV92 336 aa8.01□□□□□ -1.13
HMGB1P3-201ENST00000502802 CADPSQ9ULU8 1353 aa8□□□□□ -1.13
HMGB1P3-201ENST00000502802 MINDY4BA8MYZ0 360 aa8□□□□□ -1.13
HMGB1P3-201ENST00000502802 STK10O94804 968 aaKnown RBP8□□□□□ -1.13
HMGB1P3-201ENST00000502802 HMGB1P09429 215 aaKnown RBP8□□□□□ -1.13
HMGB1P3-201ENST00000502802 GBP2P32456 591 aaPredicted RBP8□□□□□ -1.13
HMGB1P3-201ENST00000502802 GRIN2CQ14957 1233 aa8□□□□□ -1.13
HMGB1P3-201ENST00000502802 DHX32Q7L7V1 743 aaKnown RBP8□□□□□ -1.13
HMGB1P3-201ENST00000502802 NOP9Q86U38 636 aaKnown RBP8□□□□□ -1.13
HMGB1P3-201ENST00000502802 KIAA0825Q8IV33 1275 aa8□□□□□ -1.13
HMGB1P3-201ENST00000502802 TRIM22Q8IYM9 498 aa8□□□□□ -1.13
HMGB1P3-201ENST00000502802 CEP120Q8N960 986 aa8□□□□□ -1.13
HMGB1P3-201ENST00000502802 BHMTQ93088 406 aa8□□□□□ -1.13
HMGB1P3-201ENST00000502802 TMEM74Q96NL1 305 aa8□□□□□ -1.13
HMGB1P3-201ENST00000502802 SLC30A3Q99726 388 aa8□□□□□ -1.13
HMGB1P3-201ENST00000502802 ATP13A2Q9NQ11 1180 aa8□□□□□ -1.13
HMGB1P3-201ENST00000502802 SOBPA7XYQ1 873 aa7.99□□□□□ -1.13
HMGB1P3-201ENST00000502802 FBXO24O75426 580 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms