RNA–Protein interactions for RNA: ENST00000498814.1

CPNE1-228, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-228ENST00000498814 DDX19BQ9UMR2 479 aa19.47■□□□□ 0.71
CPNE1-228ENST00000498814 MINPP1Q9UNW1 487 aa19.47■□□□□ 0.71
CPNE1-228ENST00000498814 NSFL1CQ9UNZ2 370 aaKnown RBP19.47■□□□□ 0.71
CPNE1-228ENST00000498814 A0A1B0GUL6 1792 aa19.47■□□□□ 0.71
CPNE1-228ENST00000498814 TIAM2Q8IVF5 1701 aa19.46■□□□□ 0.71
CPNE1-228ENST00000498814 RRP1P56182 461 aaKnown RBP19.46■□□□□ 0.71
CPNE1-228ENST00000498814 MTX1Q13505 466 aa19.46■□□□□ 0.71
CPNE1-228ENST00000498814 TAF7LQ5H9L4 462 aa19.46■□□□□ 0.71
CPNE1-228ENST00000498814 C20orf194Q5TEA3 1177 aa19.46■□□□□ 0.71
CPNE1-228ENST00000498814 ZNF594Q96JF6 807 aaPredicted RBP19.46■□□□□ 0.71
CPNE1-228ENST00000498814 COG6Q9Y2V7 657 aa19.46■□□□□ 0.71
CPNE1-228ENST00000498814 XDHP47989 1333 aa19.46■□□□□ 0.71
CPNE1-228ENST00000498814 IARSP41252 1262 aaKnown RBP19.45■□□□□ 0.7
CPNE1-228ENST00000498814 RFX5P48382 616 aaPredicted RBP19.45■□□□□ 0.7
CPNE1-228ENST00000498814 LDHAL6AQ6ZMR3 332 aa19.45■□□□□ 0.7
CPNE1-228ENST00000498814 ANKIB1Q9P2G1 1089 aa19.45■□□□□ 0.7
CPNE1-228ENST00000498814 TBC1D16Q8TBP0 767 aa19.44■□□□□ 0.7
CPNE1-228ENST00000498814 ANKRD2Q9GZV1 360 aa19.44■□□□□ 0.7
CPNE1-228ENST00000498814 CHMP4BQ9H444 224 aaKnown RBP19.44■□□□□ 0.7
CPNE1-228ENST00000498814 ZC3H4Q9UPT8 1303 aaKnown RBP19.44■□□□□ 0.7
CPNE1-228ENST00000498814 YY1P25490 414 aa19.43■□□□□ 0.7
CPNE1-228ENST00000498814 CNNM1Q9NRU3 951 aa19.43■□□□□ 0.7
CPNE1-228ENST00000498814 POLLQ9UGP5 575 aa19.43■□□□□ 0.7
CPNE1-228ENST00000498814 GGA1Q9UJY5 639 aa19.43■□□□□ 0.7
CPNE1-228ENST00000498814 C6orf229H3BNL8 230 aa19.42■□□□□ 0.7
CPNE1-228ENST00000498814 ATP2B4P23634 1241 aa19.42■□□□□ 0.7
CPNE1-228ENST00000498814 PTPN12Q05209 780 aaKnown RBP19.42■□□□□ 0.7
CPNE1-228ENST00000498814 CHRNDQ07001 517 aa19.42■□□□□ 0.7
CPNE1-228ENST00000498814 SRGAP3O43295 1099 aa19.41■□□□□ 0.7
CPNE1-228ENST00000498814 UFL1O94874 794 aa19.41■□□□□ 0.7
CPNE1-228ENST00000498814 KIAA2012Q0VF49 1180 aa19.41■□□□□ 0.7
CPNE1-228ENST00000498814 LARGE2Q8N3Y3 721 aa19.41■□□□□ 0.7
CPNE1-228ENST00000498814 KLHDC4Q8TBB5 520 aa19.41■□□□□ 0.7
CPNE1-228ENST00000498814 EYA3Q99504 573 aa19.41■□□□□ 0.7
CPNE1-228ENST00000498814 PUS3Q9BZE2 481 aaKnown RBP19.41■□□□□ 0.7
CPNE1-228ENST00000498814 ZBTB40Q9NUA8 1239 aa19.41■□□□□ 0.7
CPNE1-228ENST00000498814 LEMD3Q9Y2U8 911 aa19.41■□□□□ 0.7
CPNE1-228ENST00000498814 RIPOR2Q9Y4F9 1068 aa19.41■□□□□ 0.7
CPNE1-228ENST00000498814 COL4A5P29400 1685 aa19.4■□□□□ 0.7
CPNE1-228ENST00000498814 PPIP5K2O43314 1243 aa19.4■□□□□ 0.7
CPNE1-228ENST00000498814 AOC3Q16853 763 aa19.4■□□□□ 0.7
CPNE1-228ENST00000498814 WASHC4Q2M389 1173 aa19.4■□□□□ 0.7
CPNE1-228ENST00000498814 JDP2Q8WYK2 163 aa19.4■□□□□ 0.7
CPNE1-228ENST00000498814 C1orf115Q9H7X2 142 aa19.4■□□□□ 0.7
CPNE1-228ENST00000498814 COPRSQ9NQ92 184 aa19.4■□□□□ 0.7
CPNE1-228ENST00000498814 FBXO3Q9UK99 471 aa19.4■□□□□ 0.7
CPNE1-228ENST00000498814 EYA2O00167 538 aa19.39■□□□□ 0.69
CPNE1-228ENST00000498814 ATP8B2P98198 1209 aa19.39■□□□□ 0.69
CPNE1-228ENST00000498814 LRRC24Q50LG9 513 aa19.39■□□□□ 0.69
CPNE1-228ENST00000498814 MROH5Q6ZUA9 1318 aa19.39■□□□□ 0.69
CPNE1-228ENST00000498814 PNMA6EA0A0J9YXQ4 647 aa19.38■□□□□ 0.69
CPNE1-228ENST00000498814 ZNF804BA4D1E1 1349 aa19.38■□□□□ 0.69
CPNE1-228ENST00000498814 CIAO1O76071 339 aa19.38■□□□□ 0.69
CPNE1-228ENST00000498814 HELBQ8NG08 1087 aaPredicted RBP19.38■□□□□ 0.69
CPNE1-228ENST00000498814 ZC3H12CQ9C0D7 883 aaKnown RBP19.38■□□□□ 0.69
CPNE1-228ENST00000498814 WTIPA6NIX2 430 aaPredicted RBP19.37■□□□□ 0.69
CPNE1-228ENST00000498814 FZD9O00144 591 aa19.37■□□□□ 0.69
CPNE1-228ENST00000498814 TAF5LO75529 589 aa19.37■□□□□ 0.69
CPNE1-228ENST00000498814 POLA2Q14181 598 aa19.37■□□□□ 0.69
CPNE1-228ENST00000498814 NIM1KQ8IY84 436 aa19.37■□□□□ 0.69
CPNE1-228ENST00000498814 SSH3Q8TE77 659 aa19.37■□□□□ 0.69
CPNE1-228ENST00000498814 GPR101Q96P66 508 aaPredicted RBP19.37■□□□□ 0.69
CPNE1-228ENST00000498814 MED23Q9ULK4 1368 aa19.36■□□□□ 0.69
CPNE1-228ENST00000498814 RIMBP2O15034 1052 aa19.36■□□□□ 0.69
CPNE1-228ENST00000498814 CEP85Q6P2H3 762 aa19.36■□□□□ 0.69
CPNE1-228ENST00000498814 ATG9AQ7Z3C6 839 aa19.36■□□□□ 0.69
CPNE1-228ENST00000498814 PA2G4Q9UQ80 394 aaKnown RBP19.36■□□□□ 0.69
CPNE1-228ENST00000498814 SUPT16HQ9Y5B9 1047 aaKnown RBP19.36■□□□□ 0.69
CPNE1-228ENST00000498814 KCNJ4P48050 445 aa19.35■□□□□ 0.69
CPNE1-228ENST00000498814 METTL24Q5JXM2 366 aa19.35■□□□□ 0.69
CPNE1-228ENST00000498814 RPAP2Q8IXW5 612 aaPredicted RBP19.35■□□□□ 0.69
CPNE1-228ENST00000498814 VGLL2Q8N8G2 317 aa19.35■□□□□ 0.69
CPNE1-228ENST00000498814 SIL1Q9H173 461 aa19.35■□□□□ 0.69
CPNE1-228ENST00000498814 ZNRF3Q9ULT6 936 aa19.35■□□□□ 0.69
CPNE1-228ENST00000498814 PDE8BO95263 885 aa19.34■□□□□ 0.69
CPNE1-228ENST00000498814 IL15P40933 162 aaPredicted RBP19.34■□□□□ 0.69
CPNE1-228ENST00000498814 UBE4AQ14139 1066 aa19.34■□□□□ 0.69
CPNE1-228ENST00000498814 DPY19L2Q6NUT2 758 aa19.34■□□□□ 0.69
CPNE1-228ENST00000498814 C15orf52Q6ZUT6 534 aaKnown RBP19.34■□□□□ 0.69
CPNE1-228ENST00000498814 IRS2Q9Y4H2 1338 aa19.33■□□□□ 0.69
CPNE1-228ENST00000498814 GLTPD2A6NH11 291 aa19.33■□□□□ 0.68
CPNE1-228ENST00000498814 SNAP23O00161 211 aa19.33■□□□□ 0.68
CPNE1-228ENST00000498814 EIF6P56537 245 aaKnown RBP19.33■□□□□ 0.68
CPNE1-228ENST00000498814 PSME4Q14997 1843 aa19.32■□□□□ 0.68
CPNE1-228ENST00000498814 KDM2BQ8NHM5 1336 aa19.32■□□□□ 0.68
CPNE1-228ENST00000498814 DOK7Q18PE1 504 aa19.32■□□□□ 0.68
CPNE1-228ENST00000498814 TXNRD3Q86VQ6 643 aa19.32■□□□□ 0.68
CPNE1-228ENST00000498814 ZNF784Q8NCA9 323 aaPredicted RBP19.32■□□□□ 0.68
CPNE1-228ENST00000498814 DBNDD1Q9H9R9 158 aa19.32■□□□□ 0.68
CPNE1-228ENST00000498814 SCN9AQ15858 1988 aa19.32■□□□□ 0.68
CPNE1-228ENST00000498814 ZNF541Q9H0D2 1346 aa19.31■□□□□ 0.68
CPNE1-228ENST00000498814 G3V3G9 751 aa19.31■□□□□ 0.68
CPNE1-228ENST00000498814 ECE2O60344 883 aa19.31■□□□□ 0.68
CPNE1-228ENST00000498814 KLRK1P26718 216 aa19.31■□□□□ 0.68
CPNE1-228ENST00000498814 DCAF8Q5TAQ9 597 aa19.31■□□□□ 0.68
CPNE1-228ENST00000498814 CRBNQ96SW2 442 aa19.31■□□□□ 0.68
CPNE1-228ENST00000498814 CEP126Q9P2H0 1117 aa19.31■□□□□ 0.68
CPNE1-228ENST00000498814 YDJCA8MPS7 323 aa19.3■□□□□ 0.68
CPNE1-228ENST00000498814 G3BP1Q13283 466 aaKnown RBP eCLIP19.3■□□□□ 0.685e-11■□□□□ 10.2
CPNE1-228ENST00000498814 PUM3Q15397 648 aaKnown RBP19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms