RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 HOXB7P09629 217 aa19.16■□□□□ 0.66
TRAF4-212ENST00000498540 TBC1D16Q8TBP0 767 aa19.16■□□□□ 0.66
TRAF4-212ENST00000498540 DCPSQ96C86 337 aaKnown RBP19.16■□□□□ 0.66
TRAF4-212ENST00000498540 EYA3Q99504 573 aa19.16■□□□□ 0.66
TRAF4-212ENST00000498540 IRS4O14654 1257 aaPredicted RBP19.15■□□□□ 0.66
TRAF4-212ENST00000498540 KIF4BQ2VIQ3 1234 aa19.15■□□□□ 0.66
TRAF4-212ENST00000498540 C2orf69Q8N8R5 385 aa19.15■□□□□ 0.66
TRAF4-212ENST00000498540 PSME4Q14997 1843 aa19.15■□□□□ 0.66
TRAF4-212ENST00000498540 ASTN2O75129 1339 aaPredicted RBP19.15■□□□□ 0.66
TRAF4-212ENST00000498540 TNRC18O15417 2968 aaPredicted RBP19.15■□□□□ 0.66
TRAF4-212ENST00000498540 AKAP11Q9UKA4 1901 aa19.15■□□□□ 0.66
TRAF4-212ENST00000498540 RPS8P62241 208 aaKnown RBP19.14■□□□□ 0.65
TRAF4-212ENST00000498540 GGA3Q9NZ52 723 aa19.14■□□□□ 0.65
TRAF4-212ENST00000498540 ZNF157P51786 506 aaPredicted RBP19.13■□□□□ 0.65
TRAF4-212ENST00000498540 KIF23Q02241 960 aaPredicted RBP19.13■□□□□ 0.65
TRAF4-212ENST00000498540 TRIM28Q13263 835 aaKnown RBP19.13■□□□□ 0.65
TRAF4-212ENST00000498540 DUSP27Q5VZP5 1158 aa19.13■□□□□ 0.65
TRAF4-212ENST00000498540 RUNDC1Q96C34 613 aa19.13■□□□□ 0.65
TRAF4-212ENST00000498540 SEC31BQ9NQW1 1179 aa19.13■□□□□ 0.65
TRAF4-212ENST00000498540 HYPKQ9NX55 129 aa19.13■□□□□ 0.65
TRAF4-212ENST00000498540 VIL1P09327 827 aaKnown RBP19.12■□□□□ 0.65
TRAF4-212ENST00000498540 CCDC102AQ96A19 550 aa19.12■□□□□ 0.65
TRAF4-212ENST00000498540 SAGE1Q9NXZ1 904 aa19.12■□□□□ 0.65
TRAF4-212ENST00000498540 PODXL2Q9NZ53 605 aa19.12■□□□□ 0.65
TRAF4-212ENST00000498540 MYBBP1AQ9BQG0 1328 aaKnown RBP19.11■□□□□ 0.65
TRAF4-212ENST00000498540 UFL1O94874 794 aa19.11■□□□□ 0.65
TRAF4-212ENST00000498540 SLC10A3P09131 477 aa19.11■□□□□ 0.65
TRAF4-212ENST00000498540 SULF1Q8IWU6 871 aa19.11■□□□□ 0.65
TRAF4-212ENST00000498540 ZC3H12CQ9C0D7 883 aaKnown RBP19.11■□□□□ 0.65
TRAF4-212ENST00000498540 ZNF609O15014 1411 aa19.1■□□□□ 0.65
TRAF4-212ENST00000498540 TRPA1O75762 1119 aa19.1■□□□□ 0.65
TRAF4-212ENST00000498540 ZBTB38Q8NAP3 1195 aaPredicted RBP19.1■□□□□ 0.65
TRAF4-212ENST00000498540 CDCA5Q96FF9 252 aa19.1■□□□□ 0.65
TRAF4-212ENST00000498540 MBIPQ9NS73 344 aa19.1■□□□□ 0.65
TRAF4-212ENST00000498540 RNF186Q9NXI6 227 aa19.1■□□□□ 0.65
TRAF4-212ENST00000498540 ANKIB1Q9P2G1 1089 aa19.1■□□□□ 0.65
TRAF4-212ENST00000498540 RIC3Q7Z5B4 369 aa19.09■□□□□ 0.65
TRAF4-212ENST00000498540 PHAXQ9H814 394 aaKnown RBP19.09■□□□□ 0.65
TRAF4-212ENST00000498540 GGA1Q9UJY5 639 aa19.09■□□□□ 0.65
TRAF4-212ENST00000498540 ZNF280AP59817 542 aaPredicted RBP19.08■□□□□ 0.64
TRAF4-212ENST00000498540 GOLGA2Q08379 1002 aa19.08■□□□□ 0.64
TRAF4-212ENST00000498540 WDR43Q15061 677 aaKnown RBP eCLIP19.08■□□□□ 0.64
TRAF4-212ENST00000498540 ANGEL2Q5VTE6 544 aaKnown RBP19.08■□□□□ 0.64
TRAF4-212ENST00000498540 CSRNP1Q96S65 589 aa19.08■□□□□ 0.64
TRAF4-212ENST00000498540 MYD88Q99836 296 aa19.08■□□□□ 0.64
TRAF4-212ENST00000498540 ADAMTS8Q9UP79 889 aa19.08■□□□□ 0.64
TRAF4-212ENST00000498540 PAPPA2Q9BXP8 1791 aa19.08■□□□□ 0.64
TRAF4-212ENST00000498540 SPEF2Q9C093 1822 aa19.07■□□□□ 0.64
TRAF4-212ENST00000498540 G3V3G9 751 aa19.07■□□□□ 0.64
TRAF4-212ENST00000498540 SCARF1Q14162 830 aa19.07■□□□□ 0.64
TRAF4-212ENST00000498540 DCAF8Q5TAQ9 597 aa19.07■□□□□ 0.64
TRAF4-212ENST00000498540 RSBN1LQ6PCB5 846 aaPredicted RBP19.07■□□□□ 0.64
TRAF4-212ENST00000498540 RASAL3Q86YV0 1011 aa19.07■□□□□ 0.64
TRAF4-212ENST00000498540 JARID2Q92833 1246 aaPredicted RBP19.07■□□□□ 0.64
TRAF4-212ENST00000498540 CCDC85AQ96PX6 553 aaPredicted RBP19.07■□□□□ 0.64
TRAF4-212ENST00000498540 ZNF646O15015 1829 aaPredicted RBP19.07■□□□□ 0.64
TRAF4-212ENST00000498540 SOX10P56693 466 aa19.06■□□□□ 0.64
TRAF4-212ENST00000498540 CCDC152Q4G0S7 254 aa19.06■□□□□ 0.64
TRAF4-212ENST00000498540 AGBL3Q8NEM8 1001 aa19.06■□□□□ 0.64
TRAF4-212ENST00000498540 PDE4DIPQ5VU43 2346 aa19.06■□□□□ 0.64
TRAF4-212ENST00000498540 PCCAP05165 728 aaPredicted RBP19.05■□□□□ 0.64
TRAF4-212ENST00000498540 ZNF853P0CG23 659 aa19.05■□□□□ 0.64
TRAF4-212ENST00000498540 GMLQ99445 158 aa19.05■□□□□ 0.64
TRAF4-212ENST00000498540 SCAF8Q9UPN6 1271 aaKnown RBP19.05■□□□□ 0.64
TRAF4-212ENST00000498540 ELL2O00472 640 aaPredicted RBP19.04■□□□□ 0.64
TRAF4-212ENST00000498540 PDE8AO60658 829 aa19.04■□□□□ 0.64
TRAF4-212ENST00000498540 HSP90B1P14625 803 aaKnown RBP19.04■□□□□ 0.64
TRAF4-212ENST00000498540 CCDC191Q8NCU4 936 aa19.04■□□□□ 0.64
TRAF4-212ENST00000498540 MYOZ2Q9NPC6 264 aa19.04■□□□□ 0.64
TRAF4-212ENST00000498540 XDHP47989 1333 aa19.03■□□□□ 0.64
TRAF4-212ENST00000498540 WTIPA6NIX2 430 aaPredicted RBP19.03■□□□□ 0.64
TRAF4-212ENST00000498540 USP17L8P0C7I0 530 aa19.03■□□□□ 0.64
TRAF4-212ENST00000498540 DDX10Q13206 875 aaKnown RBP19.03■□□□□ 0.64
TRAF4-212ENST00000498540 MOB2Q70IA6 237 aa19.03■□□□□ 0.64
TRAF4-212ENST00000498540 CWC25Q9NXE8 425 aaPredicted RBP19.03■□□□□ 0.64
TRAF4-212ENST00000498540 MYH3P11055 1940 aa19.03■□□□□ 0.64
TRAF4-212ENST00000498540 PITPNM2Q9BZ72 1349 aa19.02■□□□□ 0.64
TRAF4-212ENST00000498540 CTU1Q7Z7A3 348 aaKnown RBP19.02■□□□□ 0.64
TRAF4-212ENST00000498540 ANKRD18AQ8IVF6 992 aa19.02■□□□□ 0.64
TRAF4-212ENST00000498540 USP17L3A6NCW0 530 aa19.01■□□□□ 0.63
TRAF4-212ENST00000498540 USP17L4A6NCW7 530 aa19.01■□□□□ 0.63
TRAF4-212ENST00000498540 FKBP1BP68106 108 aa19.01■□□□□ 0.63
TRAF4-212ENST00000498540 USP17L1Q7RTZ2 530 aa19.01■□□□□ 0.63
TRAF4-212ENST00000498540 METTL22Q9BUU2 404 aaPredicted RBP19.01■□□□□ 0.63
TRAF4-212ENST00000498540 IFT57Q9NWB7 429 aa19.01■□□□□ 0.63
TRAF4-212ENST00000498540 ATP2B4P23634 1241 aa19■□□□□ 0.63
TRAF4-212ENST00000498540 PRAMEF18Q5VWM3 479 aa19■□□□□ 0.63
TRAF4-212ENST00000498540 PODNQ7Z5L7 613 aa19■□□□□ 0.63
TRAF4-212ENST00000498540 C8orf58Q8NAV2 365 aa19■□□□□ 0.63
TRAF4-212ENST00000498540 MED23Q9ULK4 1368 aa18.99■□□□□ 0.63
TRAF4-212ENST00000498540 CTSWP56202 376 aa18.99■□□□□ 0.63
TRAF4-212ENST00000498540 NBPF9Q3BBW0 867 aa18.99■□□□□ 0.63
TRAF4-212ENST00000498540 REM2Q8IYK8 340 aaPredicted RBP18.99■□□□□ 0.63
TRAF4-212ENST00000498540 MXD3Q9BW11 206 aa18.99■□□□□ 0.63
TRAF4-212ENST00000498540 UBE2Q2LH0YL09 131 aa18.98■□□□□ 0.63
TRAF4-212ENST00000498540 APAF1O14727 1248 aa18.98■□□□□ 0.63
TRAF4-212ENST00000498540 GNAI1P63096 354 aa18.98■□□□□ 0.63
TRAF4-212ENST00000498540 MAP3K2Q9Y2U5 619 aa18.98■□□□□ 0.63
TRAF4-212ENST00000498540 CDC5LQ99459 802 aaKnown RBP18.97■□□□□ 0.63
TRAF4-212ENST00000498540 TBC1D8O95759 1140 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms