RNA–Protein interactions for RNA: ENST00000495553.1

ACTN4-207, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-207ENST00000495553 COL11A2P13942 1736 aaPredicted RBP11.74□□□□□ -0.53
ACTN4-207ENST00000495553 RAB11FIP3O75154 756 aa11.73□□□□□ -0.53
ACTN4-207ENST00000495553 SURF6O75683 361 aaKnown RBP11.73□□□□□ -0.53
ACTN4-207ENST00000495553 G3BP1Q13283 466 aaKnown RBP eCLIP11.73□□□□□ -0.532e-13■■□□□ 13.9
ACTN4-207ENST00000495553 EPHA10Q5JZY3 1008 aa11.73□□□□□ -0.53
ACTN4-207ENST00000495553 MPNDQ8N594 471 aa11.73□□□□□ -0.53
ACTN4-207ENST00000495553 SUPT20HQ8NEM7 779 aa11.73□□□□□ -0.53
ACTN4-207ENST00000495553 RTL9Q8NET4 1388 aa11.73□□□□□ -0.53
ACTN4-207ENST00000495553 PSMD1Q99460 953 aa11.73□□□□□ -0.53
ACTN4-207ENST00000495553 MPHOSPH8Q99549 860 aa11.73□□□□□ -0.53
ACTN4-207ENST00000495553 ZNF277Q9NRM2 450 aaPredicted RBP11.73□□□□□ -0.53
ACTN4-207ENST00000495553 LTBP3Q9NS15 1303 aa11.73□□□□□ -0.53
ACTN4-207ENST00000495553 NSFL1CQ9UNZ2 370 aaKnown RBP11.73□□□□□ -0.53
ACTN4-207ENST00000495553 PNMA6EA0A0J9YXQ4 647 aa11.72□□□□□ -0.53
ACTN4-207ENST00000495553 POLA2Q14181 598 aa11.72□□□□□ -0.53
ACTN4-207ENST00000495553 KAZALD1Q96I82 304 aa11.72□□□□□ -0.53
ACTN4-207ENST00000495553 ANKIB1Q9P2G1 1089 aa11.72□□□□□ -0.53
ACTN4-207ENST00000495553 FBXO3Q9UK99 471 aa11.72□□□□□ -0.53
ACTN4-207ENST00000495553 MYH3P11055 1940 aa11.72□□□□□ -0.53
ACTN4-207ENST00000495553 LAMB2P55268 1798 aa11.72□□□□□ -0.53
ACTN4-207ENST00000495553 C6orf229H3BNL8 230 aa11.71□□□□□ -0.53
ACTN4-207ENST00000495553 IARSP41252 1262 aaKnown RBP11.71□□□□□ -0.53
ACTN4-207ENST00000495553 SLC51AQ86UW1 340 aa11.71□□□□□ -0.53
ACTN4-207ENST00000495553 SIRT2Q8IXJ6 389 aa11.71□□□□□ -0.53
ACTN4-207ENST00000495553 DCTPP1Q9H773 170 aa11.71□□□□□ -0.53
ACTN4-207ENST00000495553 BSDC1Q9NW68 430 aaPredicted RBP11.71□□□□□ -0.53
ACTN4-207ENST00000495553 SLX4Q8IY92 1834 aa11.71□□□□□ -0.54
ACTN4-207ENST00000495553 DLEC1Q9Y238 1755 aa11.71□□□□□ -0.54
ACTN4-207ENST00000495553 BRCA1P38398 1863 aaKnown RBP11.7□□□□□ -0.54
ACTN4-207ENST00000495553 PPIP5K2O43314 1243 aa11.7□□□□□ -0.54
ACTN4-207ENST00000495553 IGHDP01880 384 aa11.7□□□□□ -0.54
ACTN4-207ENST00000495553 PRELPP51888 382 aa11.7□□□□□ -0.54
ACTN4-207ENST00000495553 GPSM2P81274 684 aa11.7□□□□□ -0.54
ACTN4-207ENST00000495553 LARGE2Q8N3Y3 721 aa11.7□□□□□ -0.54
ACTN4-207ENST00000495553 JDP2Q8WYK2 163 aa11.7□□□□□ -0.54
ACTN4-207ENST00000495553 LRRCC1Q9C099 1032 aa11.7□□□□□ -0.54
ACTN4-207ENST00000495553 COPRSQ9NQ92 184 aa11.7□□□□□ -0.54
ACTN4-207ENST00000495553 CNNM1Q9NRU3 951 aa11.7□□□□□ -0.54
ACTN4-207ENST00000495553 NOP58Q9Y2X3 529 aaKnown RBP11.7□□□□□ -0.54
ACTN4-207ENST00000495553 XDHP47989 1333 aa11.69□□□□□ -0.54
ACTN4-207ENST00000495553 ZC3H4Q9UPT8 1303 aaKnown RBP11.69□□□□□ -0.54
ACTN4-207ENST00000495553 CIAO1O76071 339 aa11.69□□□□□ -0.54
ACTN4-207ENST00000495553 UFL1O94874 794 aa11.69□□□□□ -0.54
ACTN4-207ENST00000495553 IL15P40933 162 aaPredicted RBP11.69□□□□□ -0.54
ACTN4-207ENST00000495553 ANKRD45Q5TZF3 282 aa11.69□□□□□ -0.54
ACTN4-207ENST00000495553 LDHAL6AQ6ZMR3 332 aa11.69□□□□□ -0.54
ACTN4-207ENST00000495553 SMC5Q8IY18 1101 aa11.69□□□□□ -0.54
ACTN4-207ENST00000495553 ZNF526Q8TF50 670 aaPredicted RBP11.69□□□□□ -0.54
ACTN4-207ENST00000495553 KIF1BPQ96EK5 621 aa11.69□□□□□ -0.54
ACTN4-207ENST00000495553 EYA3Q99504 573 aa11.69□□□□□ -0.54
ACTN4-207ENST00000495553 RTFDC1Q9BY42 306 aaPredicted RBP11.69□□□□□ -0.54
ACTN4-207ENST00000495553 ANKRD2Q9GZV1 360 aa11.69□□□□□ -0.54
ACTN4-207ENST00000495553 SIL1Q9H173 461 aa11.69□□□□□ -0.54
ACTN4-207ENST00000495553 VPS33BQ9H267 617 aa11.69□□□□□ -0.54
ACTN4-207ENST00000495553 GGA1Q9UJY5 639 aa11.69□□□□□ -0.54
ACTN4-207ENST00000495553 MINPP1Q9UNW1 487 aa11.69□□□□□ -0.54
ACTN4-207ENST00000495553 EXOC6BQ9Y2D4 811 aa11.69□□□□□ -0.54
ACTN4-207ENST00000495553 DDX60Q8IY21 1712 aaKnown RBP11.69□□□□□ -0.54
ACTN4-207ENST00000495553 KDM2BQ8NHM5 1336 aa11.68□□□□□ -0.54
ACTN4-207ENST00000495553 ARFGEF1Q9Y6D6 1849 aa11.68□□□□□ -0.54
ACTN4-207ENST00000495553 APBB1O00213 710 aa11.68□□□□□ -0.54
ACTN4-207ENST00000495553 ATP2B4P23634 1241 aa11.68□□□□□ -0.54
ACTN4-207ENST00000495553 PTPN12Q05209 780 aaKnown RBP11.68□□□□□ -0.54
ACTN4-207ENST00000495553 AOC3Q16853 763 aa11.68□□□□□ -0.54
ACTN4-207ENST00000495553 WASHC4Q2M389 1173 aa11.68□□□□□ -0.54
ACTN4-207ENST00000495553 NIM1KQ8IY84 436 aa11.68□□□□□ -0.54
ACTN4-207ENST00000495553 CLASRPQ8N2M8 674 aaKnown RBP11.68□□□□□ -0.54
ACTN4-207ENST00000495553 ZNF784Q8NCA9 323 aaPredicted RBP11.68□□□□□ -0.54
ACTN4-207ENST00000495553 TBC1D16Q8TBP0 767 aa11.68□□□□□ -0.54
ACTN4-207ENST00000495553 ZNF594Q96JF6 807 aaPredicted RBP11.68□□□□□ -0.54
ACTN4-207ENST00000495553 PODXL2Q9NZ53 605 aa11.68□□□□□ -0.54
ACTN4-207ENST00000495553 POLLQ9UGP5 575 aa11.68□□□□□ -0.54
ACTN4-207ENST00000495553 MROH5Q6ZUA9 1318 aa11.67□□□□□ -0.54
ACTN4-207ENST00000495553 G3V3G9 751 aa11.67□□□□□ -0.54
ACTN4-207ENST00000495553 EYA2O00167 538 aa11.67□□□□□ -0.54
ACTN4-207ENST00000495553 RIMBP2O15034 1052 aa11.67□□□□□ -0.54
ACTN4-207ENST00000495553 KCNJ4P48050 445 aa11.67□□□□□ -0.54
ACTN4-207ENST00000495553 KIAA2012Q0VF49 1180 aa11.67□□□□□ -0.54
ACTN4-207ENST00000495553 METTL24Q5JXM2 366 aa11.67□□□□□ -0.54
ACTN4-207ENST00000495553 DCAF8Q5TAQ9 597 aa11.67□□□□□ -0.54
ACTN4-207ENST00000495553 DPY19L2Q6NUT2 758 aa11.67□□□□□ -0.54
ACTN4-207ENST00000495553 GPATCH3Q96I76 525 aa11.67□□□□□ -0.54
ACTN4-207ENST00000495553 ZC3H12CQ9C0D7 883 aaKnown RBP11.67□□□□□ -0.54
ACTN4-207ENST00000495553 GPBP1L1Q9HC44 474 aaPredicted RBP11.67□□□□□ -0.54
ACTN4-207ENST00000495553 CEP126Q9P2H0 1117 aa11.67□□□□□ -0.54
ACTN4-207ENST00000495553 PA2G4Q9UQ80 394 aaKnown RBP11.67□□□□□ -0.54
ACTN4-207ENST00000495553 AKAP2Q9Y2D5 859 aa11.67□□□□□ -0.54
ACTN4-207ENST00000495553 SNED1Q8TER0 1413 aa11.67□□□□□ -0.54
ACTN4-207ENST00000495553 RFX5P48382 616 aaPredicted RBP11.66□□□□□ -0.54
ACTN4-207ENST00000495553 EIF6P56537 245 aaKnown RBP11.66□□□□□ -0.54
ACTN4-207ENST00000495553 NUCB1Q02818 461 aa11.66□□□□□ -0.54
ACTN4-207ENST00000495553 CHRNDQ07001 517 aa11.66□□□□□ -0.54
ACTN4-207ENST00000495553 CHD1LQ86WJ1 897 aa11.66□□□□□ -0.54
ACTN4-207ENST00000495553 KLHDC4Q8TBB5 520 aa11.66□□□□□ -0.54
ACTN4-207ENST00000495553 LEMD3Q9Y2U8 911 aa11.66□□□□□ -0.54
ACTN4-207ENST00000495553 GLTPD2A6NH11 291 aa11.65□□□□□ -0.54
ACTN4-207ENST00000495553 IFIT2P09913 472 aaKnown RBP11.65□□□□□ -0.54
ACTN4-207ENST00000495553 RHPN1Q8TCX5 695 aa11.65□□□□□ -0.54
ACTN4-207ENST00000495553 GPR101Q96P66 508 aaPredicted RBP11.65□□□□□ -0.54
ACTN4-207ENST00000495553 BCL11AQ9H165 835 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms