RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 SPATA31A7Q8IWB4 1347 aa12.49□□□□□ -0.41
SAMM50-206ENST00000494795 MYH14Q7Z406 1995 aaKnown RBP12.49□□□□□ -0.41
SAMM50-206ENST00000494795 IRS4O14654 1257 aaPredicted RBP12.49□□□□□ -0.41
SAMM50-206ENST00000494795 IL15P40933 162 aaPredicted RBP12.49□□□□□ -0.41
SAMM50-206ENST00000494795 STK3Q13188 491 aa12.49□□□□□ -0.41
SAMM50-206ENST00000494795 XAGE2Q96GT9 111 aa12.49□□□□□ -0.41
SAMM50-206ENST00000494795 PAG1Q9NWQ8 432 aa12.49□□□□□ -0.41
SAMM50-206ENST00000494795 LOC102724428A0A0B4J2F2 783 aa12.49□□□□□ -0.41
SAMM50-206ENST00000494795 CSF1RP07333 972 aa12.49□□□□□ -0.41
SAMM50-206ENST00000494795 SIK1P57059 783 aa12.49□□□□□ -0.41
SAMM50-206ENST00000494795 TTLL5Q6EMB2 1281 aa12.49□□□□□ -0.41
SAMM50-206ENST00000494795 STOX1Q6ZVD7 989 aa12.49□□□□□ -0.41
SAMM50-206ENST00000494795 ZSWIM6Q9HCJ5 1215 aa12.49□□□□□ -0.41
SAMM50-206ENST00000494795 COL4A1P02462 1669 aa12.49□□□□□ -0.41
SAMM50-206ENST00000494795 COL22A1Q8NFW1 1626 aaPredicted RBP12.49□□□□□ -0.41
SAMM50-206ENST00000494795 BRD1O95696 1058 aa12.49□□□□□ -0.41
SAMM50-206ENST00000494795 SLC51AQ86UW1 340 aa12.49□□□□□ -0.41
SAMM50-206ENST00000494795 AMIGO3Q86WK7 504 aa12.49□□□□□ -0.41
SAMM50-206ENST00000494795 DDX49Q9Y6V7 483 aaKnown RBP12.49□□□□□ -0.41
SAMM50-206ENST00000494795 LRP6O75581 1613 aa12.48□□□□□ -0.41
SAMM50-206ENST00000494795 CYP21A2P08686 494 aa12.48□□□□□ -0.41
SAMM50-206ENST00000494795 NUCB2P80303 420 aa12.48□□□□□ -0.41
SAMM50-206ENST00000494795 CHST3Q7LGC8 479 aa12.48□□□□□ -0.41
SAMM50-206ENST00000494795 CCDC24Q8N4L8 307 aa12.48□□□□□ -0.41
SAMM50-206ENST00000494795 CWC22Q9HCG8 908 aaKnown RBP12.48□□□□□ -0.41
SAMM50-206ENST00000494795 FSD2A1L4K1 749 aa12.48□□□□□ -0.41
SAMM50-206ENST00000494795 M0R2C6 588 aa12.48□□□□□ -0.41
SAMM50-206ENST00000494795 IFIT1P09914 478 aaKnown RBP12.48□□□□□ -0.41
SAMM50-206ENST00000494795 IFIT5Q13325 482 aaKnown RBP12.48□□□□□ -0.41
SAMM50-206ENST00000494795 NKX2-3Q8TAU0 364 aa12.48□□□□□ -0.41
SAMM50-206ENST00000494795 KCNB2Q92953 911 aa12.48□□□□□ -0.41
SAMM50-206ENST00000494795 UBAP1LF5GYI3 381 aa12.47□□□□□ -0.41
SAMM50-206ENST00000494795 GADD45BO75293 160 aaPredicted RBP12.47□□□□□ -0.41
SAMM50-206ENST00000494795 ZAP70P43403 619 aa12.47□□□□□ -0.41
SAMM50-206ENST00000494795 EIF5P55010 431 aaKnown RBP12.47□□□□□ -0.41
SAMM50-206ENST00000494795 TRIM28Q13263 835 aaKnown RBP12.47□□□□□ -0.41
SAMM50-206ENST00000494795 TAF7LQ5H9L4 462 aa12.47□□□□□ -0.41
SAMM50-206ENST00000494795 CAVIN1Q6NZI2 390 aaKnown RBP12.47□□□□□ -0.41
SAMM50-206ENST00000494795 LDHAL6AQ6ZMR3 332 aa12.47□□□□□ -0.41
SAMM50-206ENST00000494795 CLEC17AQ6ZS10 378 aa12.47□□□□□ -0.41
SAMM50-206ENST00000494795 KBTBD3Q8NAB2 608 aa12.47□□□□□ -0.41
SAMM50-206ENST00000494795 OSBP2Q969R2 916 aa12.47□□□□□ -0.41
SAMM50-206ENST00000494795 TEX13AQ9BXU3 409 aaPredicted RBP12.47□□□□□ -0.41
SAMM50-206ENST00000494795 CEP126Q9P2H0 1117 aa12.47□□□□□ -0.41
SAMM50-206ENST00000494795 LIMCH1Q9UPQ0 1083 aa12.47□□□□□ -0.41
SAMM50-206ENST00000494795 RIPOR2Q9Y4F9 1068 aa12.47□□□□□ -0.41
SAMM50-206ENST00000494795 CTSWP56202 376 aa12.47□□□□□ -0.41
SAMM50-206ENST00000494795 TOB2Q14106 344 aaPredicted RBP12.47□□□□□ -0.41
SAMM50-206ENST00000494795 RIC1Q4ADV7 1423 aa12.47□□□□□ -0.41
SAMM50-206ENST00000494795 NRAPQ86VF7 1730 aa12.47□□□□□ -0.41
SAMM50-206ENST00000494795 FOXP2O15409 715 aa12.47□□□□□ -0.41
SAMM50-206ENST00000494795 C3orf67Q6ZVT6 689 aa12.47□□□□□ -0.41
SAMM50-206ENST00000494795 CYP46A1Q9Y6A2 500 aa12.47□□□□□ -0.41
SAMM50-206ENST00000494795 NUP98P52948 1817 aa12.47□□□□□ -0.41
SAMM50-206ENST00000494795 TCHHQ07283 1943 aa12.46□□□□□ -0.41
SAMM50-206ENST00000494795 FAM173BQ6P4H8 233 aa12.46□□□□□ -0.41
SAMM50-206ENST00000494795 NGLY1Q96IV0 654 aa12.46□□□□□ -0.41
SAMM50-206ENST00000494795 DENND2AQ9ULE3 1009 aa12.46□□□□□ -0.41
SAMM50-206ENST00000494795 SYT1P21579 422 aa12.46□□□□□ -0.42
SAMM50-206ENST00000494795 ZNF34Q8IZ26 560 aa12.46□□□□□ -0.42
SAMM50-206ENST00000494795 GOLGA6L3A6NEY3 463 aa12.45□□□□□ -0.42
SAMM50-206ENST00000494795 MCAMP43121 646 aa12.45□□□□□ -0.42
SAMM50-206ENST00000494795 MCMDC2Q4G0Z9 681 aa12.45□□□□□ -0.42
SAMM50-206ENST00000494795 METTL24Q5JXM2 366 aa12.45□□□□□ -0.42
SAMM50-206ENST00000494795 HOMEZQ8IX15 550 aa12.45□□□□□ -0.42
SAMM50-206ENST00000494795 GPHNQ9NQX3 736 aaPredicted RBP12.45□□□□□ -0.42
SAMM50-206ENST00000494795 MAST3O60307 1309 aa12.45□□□□□ -0.42
SAMM50-206ENST00000494795 PALLDQ8WX93 1383 aa12.45□□□□□ -0.42
SAMM50-206ENST00000494795 GJB2P29033 226 aa12.45□□□□□ -0.42
SAMM50-206ENST00000494795 MCM2P49736 904 aa12.45□□□□□ -0.42
SAMM50-206ENST00000494795 BICDL1Q6ZP65 573 aa12.45□□□□□ -0.42
SAMM50-206ENST00000494795 LINC00116Q8NCU8 138 aa12.45□□□□□ -0.42
SAMM50-206ENST00000494795 PUS7LQ9H0K6 701 aaKnown RBP12.45□□□□□ -0.42
SAMM50-206ENST00000494795 CCDC87Q9NVE4 849 aa12.45□□□□□ -0.42
SAMM50-206ENST00000494795 WNK3Q9BYP7 1800 aa12.45□□□□□ -0.42
SAMM50-206ENST00000494795 CAMTA2O94983 1202 aa12.45□□□□□ -0.42
SAMM50-206ENST00000494795 ZKSCAN1P17029 563 aaPredicted RBP12.45□□□□□ -0.42
SAMM50-206ENST00000494795 IL6STP40189 918 aaPredicted RBP12.45□□□□□ -0.42
SAMM50-206ENST00000494795 HAND2P61296 217 aa12.45□□□□□ -0.42
SAMM50-206ENST00000494795 INTS4Q96HW7 963 aaKnown RBP12.45□□□□□ -0.42
SAMM50-206ENST00000494795 CNNM1Q9NRU3 951 aa12.45□□□□□ -0.42
SAMM50-206ENST00000494795 UTRNP46939 3433 aa12.44□□□□□ -0.42
SAMM50-206ENST00000494795 CIAO1O76071 339 aa12.44□□□□□ -0.42
SAMM50-206ENST00000494795 PHKA1P46020 1223 aa12.44□□□□□ -0.42
SAMM50-206ENST00000494795 GORABQ5T7V8 394 aa12.44□□□□□ -0.42
SAMM50-206ENST00000494795 VGLL2Q8N8G2 317 aa12.44□□□□□ -0.42
SAMM50-206ENST00000494795 PLA2G12BQ9BX93 195 aa12.44□□□□□ -0.42
SAMM50-206ENST00000494795 TMEM63CQ9P1W3 806 aa12.44□□□□□ -0.42
SAMM50-206ENST00000494795 JCADQ9P266 1359 aa12.44□□□□□ -0.42
SAMM50-206ENST00000494795 TTC39AQ5SRH9 613 aa12.44□□□□□ -0.42
SAMM50-206ENST00000494795 CNPY2Q9Y2B0 182 aa12.44□□□□□ -0.42
SAMM50-206ENST00000494795 BCL9LQ86UU0 1499 aa12.44□□□□□ -0.42
SAMM50-206ENST00000494795 HSPD1P10809 573 aaKnown RBP12.43□□□□□ -0.42
SAMM50-206ENST00000494795 RPS6KB1P23443 525 aa12.43□□□□□ -0.42
SAMM50-206ENST00000494795 USPL1Q5W0Q7 1092 aa12.43□□□□□ -0.42
SAMM50-206ENST00000494795 FERMT3Q86UX7 667 aa12.43□□□□□ -0.42
SAMM50-206ENST00000494795 MYO5AQ9Y4I1 1855 aaKnown RBP12.43□□□□□ -0.42
SAMM50-206ENST00000494795 HIP1O00291 1037 aa12.43□□□□□ -0.42
SAMM50-206ENST00000494795 EPB41L2O43491 1005 aaKnown RBP12.43□□□□□ -0.42
SAMM50-206ENST00000494795 JAK2O60674 1132 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms