RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 RPS8P62241 208 aaKnown RBP17.84■□□□□ 0.45
SAMM50-204ENST00000493161 RGMBQ6NW40 437 aa17.84■□□□□ 0.45
SAMM50-204ENST00000493161 GBA2Q9HCG7 927 aaPredicted RBP17.84■□□□□ 0.45
SAMM50-204ENST00000493161 POLR2AP24928 1970 aaKnown RBP17.84■□□□□ 0.45
SAMM50-204ENST00000493161 SCN9AQ15858 1988 aa17.83■□□□□ 0.44
SAMM50-204ENST00000493161 SLC34A2O95436 690 aa17.83■□□□□ 0.44
SAMM50-204ENST00000493161 HOXB7P09629 217 aa17.83■□□□□ 0.44
SAMM50-204ENST00000493161 RPS12P25398 132 aaKnown RBP17.83■□□□□ 0.44
SAMM50-204ENST00000493161 TRIM28Q13263 835 aaKnown RBP17.83■□□□□ 0.44
SAMM50-204ENST00000493161 JARID2Q92833 1246 aaPredicted RBP17.83■□□□□ 0.44
SAMM50-204ENST00000493161 DCPSQ96C86 337 aaKnown RBP17.83■□□□□ 0.44
SAMM50-204ENST00000493161 PHAXQ9H814 394 aaKnown RBP17.83■□□□□ 0.44
SAMM50-204ENST00000493161 MBIPQ9NS73 344 aa17.83■□□□□ 0.44
SAMM50-204ENST00000493161 HYPKQ9NX55 129 aa17.83■□□□□ 0.44
SAMM50-204ENST00000493161 ADAMTS8Q9UP79 889 aa17.83■□□□□ 0.44
SAMM50-204ENST00000493161 MYBBP1AQ9BQG0 1328 aaKnown RBP17.82■□□□□ 0.44
SAMM50-204ENST00000493161 KIF23Q02241 960 aaPredicted RBP17.82■□□□□ 0.44
SAMM50-204ENST00000493161 KIF4BQ2VIQ3 1234 aa17.82■□□□□ 0.44
SAMM50-204ENST00000493161 EYA3Q99504 573 aa17.82■□□□□ 0.44
SAMM50-204ENST00000493161 VIL1P09327 827 aaKnown RBP17.81■□□□□ 0.44
SAMM50-204ENST00000493161 DDX10Q13206 875 aaKnown RBP17.81■□□□□ 0.44
SAMM50-204ENST00000493161 C2orf69Q8N8R5 385 aa17.81■□□□□ 0.44
SAMM50-204ENST00000493161 GGA3Q9NZ52 723 aa17.81■□□□□ 0.44
SAMM50-204ENST00000493161 ELL2O00472 640 aaPredicted RBP17.8■□□□□ 0.44
SAMM50-204ENST00000493161 UFL1O94874 794 aa17.8■□□□□ 0.44
SAMM50-204ENST00000493161 ZNF157P51786 506 aaPredicted RBP17.8■□□□□ 0.44
SAMM50-204ENST00000493161 WDR43Q15061 677 aaKnown RBP eCLIP17.8■□□□□ 0.44
SAMM50-204ENST00000493161 RIC3Q7Z5B4 369 aa17.8■□□□□ 0.44
SAMM50-204ENST00000493161 ZBTB38Q8NAP3 1195 aaPredicted RBP17.8■□□□□ 0.44
SAMM50-204ENST00000493161 CCDC85AQ96PX6 553 aaPredicted RBP17.8■□□□□ 0.44
SAMM50-204ENST00000493161 MYD88Q99836 296 aa17.8■□□□□ 0.44
SAMM50-204ENST00000493161 ZC3H12CQ9C0D7 883 aaKnown RBP17.8■□□□□ 0.44
SAMM50-204ENST00000493161 PODXL2Q9NZ53 605 aa17.8■□□□□ 0.44
SAMM50-204ENST00000493161 ZNF853P0CG23 659 aa17.79■□□□□ 0.44
SAMM50-204ENST00000493161 RNF186Q9NXI6 227 aa17.79■□□□□ 0.44
SAMM50-204ENST00000493161 ANKIB1Q9P2G1 1089 aa17.79■□□□□ 0.44
SAMM50-204ENST00000493161 WTIPA6NIX2 430 aaPredicted RBP17.78■□□□□ 0.44
SAMM50-204ENST00000493161 TRPA1O75762 1119 aa17.78■□□□□ 0.44
SAMM50-204ENST00000493161 CCDC102AQ96A19 550 aa17.78■□□□□ 0.44
SAMM50-204ENST00000493161 CDCA5Q96FF9 252 aa17.78■□□□□ 0.44
SAMM50-204ENST00000493161 SCAF8Q9UPN6 1271 aaKnown RBP17.78■□□□□ 0.44
SAMM50-204ENST00000493161 SLC10A3P09131 477 aa17.77■□□□□ 0.44
SAMM50-204ENST00000493161 GOLGA2Q08379 1002 aa17.77■□□□□ 0.44
SAMM50-204ENST00000493161 SCARF1Q14162 830 aa17.77■□□□□ 0.44
SAMM50-204ENST00000493161 ANGEL2Q5VTE6 544 aaKnown RBP17.77■□□□□ 0.44
SAMM50-204ENST00000493161 SULF1Q8IWU6 871 aa17.77■□□□□ 0.44
SAMM50-204ENST00000493161 CSRNP1Q96S65 589 aa17.77■□□□□ 0.44
SAMM50-204ENST00000493161 GGA1Q9UJY5 639 aa17.77■□□□□ 0.44
SAMM50-204ENST00000493161 G3V3G9 751 aa17.76■□□□□ 0.43
SAMM50-204ENST00000493161 TNRC18O15417 2968 aaPredicted RBP17.76■□□□□ 0.43
SAMM50-204ENST00000493161 ZNF280AP59817 542 aaPredicted RBP17.76■□□□□ 0.43
SAMM50-204ENST00000493161 DCAF8Q5TAQ9 597 aa17.76■□□□□ 0.43
SAMM50-204ENST00000493161 RSBN1LQ6PCB5 846 aaPredicted RBP17.76■□□□□ 0.43
SAMM50-204ENST00000493161 SAGE1Q9NXZ1 904 aa17.76■□□□□ 0.43
SAMM50-204ENST00000493161 PCCAP05165 728 aaPredicted RBP17.75■□□□□ 0.43
SAMM50-204ENST00000493161 C8orf58Q8NAV2 365 aa17.75■□□□□ 0.43
SAMM50-204ENST00000493161 GMLQ99445 158 aa17.75■□□□□ 0.43
SAMM50-204ENST00000493161 PDE8AO60658 829 aa17.74■□□□□ 0.43
SAMM50-204ENST00000493161 CCDC152Q4G0S7 254 aa17.74■□□□□ 0.43
SAMM50-204ENST00000493161 MOB2Q70IA6 237 aa17.74■□□□□ 0.43
SAMM50-204ENST00000493161 CCDC191Q8NCU4 936 aa17.74■□□□□ 0.43
SAMM50-204ENST00000493161 AGBL3Q8NEM8 1001 aa17.74■□□□□ 0.43
SAMM50-204ENST00000493161 APAF1O14727 1248 aa17.73■□□□□ 0.43
SAMM50-204ENST00000493161 PRAMEF18Q5VWM3 479 aa17.73■□□□□ 0.43
SAMM50-204ENST00000493161 RASAL3Q86YV0 1011 aa17.73■□□□□ 0.43
SAMM50-204ENST00000493161 METTL22Q9BUU2 404 aaPredicted RBP17.73■□□□□ 0.43
SAMM50-204ENST00000493161 MXD3Q9BW11 206 aa17.73■□□□□ 0.43
SAMM50-204ENST00000493161 MYOZ2Q9NPC6 264 aa17.73■□□□□ 0.43
SAMM50-204ENST00000493161 IFT57Q9NWB7 429 aa17.73■□□□□ 0.43
SAMM50-204ENST00000493161 CWC25Q9NXE8 425 aaPredicted RBP17.73■□□□□ 0.43
SAMM50-204ENST00000493161 ZNF609O15014 1411 aa17.72■□□□□ 0.43
SAMM50-204ENST00000493161 USP17L8P0C7I0 530 aa17.72■□□□□ 0.43
SAMM50-204ENST00000493161 SOX10P56693 466 aa17.72■□□□□ 0.43
SAMM50-204ENST00000493161 ANKRD18AQ8IVF6 992 aa17.72■□□□□ 0.43
SAMM50-204ENST00000493161 PSME4Q14997 1843 aa17.72■□□□□ 0.43
SAMM50-204ENST00000493161 XDHP47989 1333 aa17.72■□□□□ 0.43
SAMM50-204ENST00000493161 USP17L3A6NCW0 530 aa17.71■□□□□ 0.43
SAMM50-204ENST00000493161 USP17L4A6NCW7 530 aa17.71■□□□□ 0.43
SAMM50-204ENST00000493161 USP17L1Q7RTZ2 530 aa17.71■□□□□ 0.43
SAMM50-204ENST00000493161 TSPYL6Q8N831 410 aa17.71■□□□□ 0.43
SAMM50-204ENST00000493161 MAP3K2Q9Y2U5 619 aa17.71■□□□□ 0.43
SAMM50-204ENST00000493161 IGKV5-2P06315 115 aa17.7■□□□□ 0.42
SAMM50-204ENST00000493161 HSP90B1P14625 803 aaKnown RBP17.7■□□□□ 0.42
SAMM50-204ENST00000493161 ATP2B4P23634 1241 aa17.7■□□□□ 0.42
SAMM50-204ENST00000493161 GNAI1P63096 354 aa17.7■□□□□ 0.42
SAMM50-204ENST00000493161 NBPF9Q3BBW0 867 aa17.7■□□□□ 0.42
SAMM50-204ENST00000493161 AKAP11Q9UKA4 1901 aa17.7■□□□□ 0.42
SAMM50-204ENST00000493161 UBE2Q2LH0YL09 131 aa17.69■□□□□ 0.42
SAMM50-204ENST00000493161 CTSWP56202 376 aa17.69■□□□□ 0.42
SAMM50-204ENST00000493161 GREM2Q9H772 168 aa17.69■□□□□ 0.42
SAMM50-204ENST00000493161 MINPP1Q9UNW1 487 aa17.69■□□□□ 0.42
SAMM50-204ENST00000493161 PAPPA2Q9BXP8 1791 aa17.68■□□□□ 0.42
SAMM50-204ENST00000493161 PODNQ7Z5L7 613 aa17.68■□□□□ 0.42
SAMM50-204ENST00000493161 TXNRD3Q86VQ6 643 aa17.68■□□□□ 0.42
SAMM50-204ENST00000493161 TTLL11Q8NHH1 800 aa17.68■□□□□ 0.42
SAMM50-204ENST00000493161 PITPNM2Q9BZ72 1349 aa17.68■□□□□ 0.42
SAMM50-204ENST00000493161 ZNF646O15015 1829 aaPredicted RBP17.68■□□□□ 0.42
SAMM50-204ENST00000493161 PI4KAP2A4QPH2 592 aa17.67■□□□□ 0.42
SAMM50-204ENST00000493161 FKBP1BP68106 108 aa17.67■□□□□ 0.42
SAMM50-204ENST00000493161 DACT2Q5SW24 774 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 154.4 ms