RNA–Protein interactions for RNA: ENST00000489707.5

PTK7-216, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 1 (best)

Gene PTK7, Length 1,935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-216ENST00000489707 ZFYP08048 801 aaPredicted RBP18.47■□□□□ 0.55
PTK7-216ENST00000489707 GJB2P29033 226 aa18.47■□□□□ 0.55
PTK7-216ENST00000489707 NLRP10Q86W26 655 aa18.47■□□□□ 0.55
PTK7-216ENST00000489707 GAS2L3Q86XJ1 694 aa18.47■□□□□ 0.55
PTK7-216ENST00000489707 TMEM87AQ8NBN3 555 aa18.47■□□□□ 0.55
PTK7-216ENST00000489707 SYTL4Q96C24 671 aaPredicted RBP18.47■□□□□ 0.55
PTK7-216ENST00000489707 FAM89AQ96GI7 184 aa18.47■□□□□ 0.55
PTK7-216ENST00000489707 NEK1Q96PY6 1258 aa18.47■□□□□ 0.55
PTK7-216ENST00000489707 NWD2Q9ULI1 1742 aa18.47■□□□□ 0.55
PTK7-216ENST00000489707 F13A1P00488 732 aa18.47■□□□□ 0.55
PTK7-216ENST00000489707 ME3Q16798 604 aa18.47■□□□□ 0.55
PTK7-216ENST00000489707 TTC39AQ5SRH9 613 aa18.47■□□□□ 0.55
PTK7-216ENST00000489707 MYH7P12883 1935 aa18.46■□□□□ 0.55
PTK7-216ENST00000489707 ZMYM1Q5SVZ6 1142 aa18.46■□□□□ 0.55
PTK7-216ENST00000489707 AK7Q96M32 723 aa18.46■□□□□ 0.55
PTK7-216ENST00000489707 PANK2Q9BZ23 570 aa18.46■□□□□ 0.55
PTK7-216ENST00000489707 CICQ96RK0 1608 aaPredicted RBP18.45■□□□□ 0.54
PTK7-216ENST00000489707 ANKRD18BA2A2Z9 1011 aa18.45■□□□□ 0.54
PTK7-216ENST00000489707 RNF113AO15541 343 aaKnown RBP18.45■□□□□ 0.54
PTK7-216ENST00000489707 LARGE1O95461 756 aa18.45■□□□□ 0.54
PTK7-216ENST00000489707 DDB1Q16531 1140 aa18.45■□□□□ 0.54
PTK7-216ENST00000489707 TPCN1Q9ULQ1 816 aa18.45■□□□□ 0.54
PTK7-216ENST00000489707 SPATA31A1Q5TZJ5 1347 aa18.45■□□□□ 0.54
PTK7-216ENST00000489707 NASPP49321 788 aaPredicted RBP18.45■□□□□ 0.54
PTK7-216ENST00000489707 KLHL34Q8N239 644 aa18.45■□□□□ 0.54
PTK7-216ENST00000489707 CHMP4CQ96CF2 233 aa18.45■□□□□ 0.54
PTK7-216ENST00000489707 LARP6Q9BRS8 491 aaKnown RBP18.45■□□□□ 0.54
PTK7-216ENST00000489707 CTSWP56202 376 aa18.44■□□□□ 0.54
PTK7-216ENST00000489707 DZIP3Q86Y13 1208 aaKnown RBP18.44■□□□□ 0.54
PTK7-216ENST00000489707 PUS3Q9BZE2 481 aaKnown RBP18.44■□□□□ 0.54
PTK7-216ENST00000489707 CCDC9Q9Y3X0 531 aaKnown RBP18.44■□□□□ 0.54
PTK7-216ENST00000489707 NDUFB9Q9Y6M9 179 aa18.44■□□□□ 0.54
PTK7-216ENST00000489707 LAMA4Q16363 1823 aa18.44■□□□□ 0.54
PTK7-216ENST00000489707 PDE8AO60658 829 aa18.43■□□□□ 0.54
PTK7-216ENST00000489707 HSP90B1P14625 803 aaKnown RBP18.43■□□□□ 0.54
PTK7-216ENST00000489707 PRIM1P49642 420 aaKnown RBP18.43■□□□□ 0.54
PTK7-216ENST00000489707 XAGE2Q96GT9 111 aa18.43■□□□□ 0.54
PTK7-216ENST00000489707 TRMT112Q9UI30 125 aaKnown RBP18.43■□□□□ 0.54
PTK7-216ENST00000489707 ZBTB1Q9Y2K1 713 aa18.43■□□□□ 0.54
PTK7-216ENST00000489707 LTBP4Q8N2S1 1624 aa18.43■□□□□ 0.54
PTK7-216ENST00000489707 IRS4O14654 1257 aaPredicted RBP18.43■□□□□ 0.54
PTK7-216ENST00000489707 CCDC173Q0VFZ6 552 aa18.43■□□□□ 0.54
PTK7-216ENST00000489707 HLFQ16534 295 aa18.43■□□□□ 0.54
PTK7-216ENST00000489707 LRSAM1Q6UWE0 723 aa18.43■□□□□ 0.54
PTK7-216ENST00000489707 LDHAL6AQ6ZMR3 332 aa18.43■□□□□ 0.54
PTK7-216ENST00000489707 TTLL11Q8NHH1 800 aa18.43■□□□□ 0.54
PTK7-216ENST00000489707 SLC4A9Q96Q91 983 aa18.43■□□□□ 0.54
PTK7-216ENST00000489707 CYP21A2P08686 494 aa18.42■□□□□ 0.54
PTK7-216ENST00000489707 ITGA6P23229 1130 aa18.42■□□□□ 0.54
PTK7-216ENST00000489707 GPTP24298 496 aa18.42■□□□□ 0.54
PTK7-216ENST00000489707 METTL24Q5JXM2 366 aa18.42■□□□□ 0.54
PTK7-216ENST00000489707 USP48Q86UV5 1035 aa18.42■□□□□ 0.54
PTK7-216ENST00000489707 TRIM44Q96DX7 344 aaPredicted RBP18.42■□□□□ 0.54
PTK7-216ENST00000489707 SEC62Q99442 399 aaKnown RBP18.42■□□□□ 0.54
PTK7-216ENST00000489707 CTNNA3Q9UI47 895 aa18.42■□□□□ 0.54
PTK7-216ENST00000489707 TOB2Q14106 344 aaPredicted RBP18.41■□□□□ 0.54
PTK7-216ENST00000489707 ATP2B3Q16720 1220 aa18.41■□□□□ 0.54
PTK7-216ENST00000489707 LARP1BQ659C4 914 aaKnown RBP18.41■□□□□ 0.54
PTK7-216ENST00000489707 CCDC129Q6ZRS4 1044 aa18.41■□□□□ 0.54
PTK7-216ENST00000489707 CNNM1Q9NRU3 951 aa18.41■□□□□ 0.54
PTK7-216ENST00000489707 TMEM63CQ9P1W3 806 aa18.41■□□□□ 0.54
PTK7-216ENST00000489707 MTMR6Q9Y217 621 aa18.41■□□□□ 0.54
PTK7-216ENST00000489707 RREB1Q92766 1687 aa18.41■□□□□ 0.54
PTK7-216ENST00000489707 UBE2HP62256 183 aa18.41■□□□□ 0.54
PTK7-216ENST00000489707 FGD1P98174 961 aa18.41■□□□□ 0.54
PTK7-216ENST00000489707 FKBP4Q02790 459 aaKnown RBP eCLIP18.41■□□□□ 0.54
PTK7-216ENST00000489707 ZSCAN25Q6NSZ9 544 aa18.41■□□□□ 0.54
PTK7-216ENST00000489707 ZNF512BQ96KM6 892 aaPredicted RBP18.41■□□□□ 0.54
PTK7-216ENST00000489707 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.41■□□□□ 0.54
PTK7-216ENST00000489707 RIC1Q4ADV7 1423 aa18.4■□□□□ 0.54
PTK7-216ENST00000489707 LETM1O95202 739 aaPredicted RBP18.4■□□□□ 0.54
PTK7-216ENST00000489707 NECAB1Q8N987 351 aa18.4■□□□□ 0.54
PTK7-216ENST00000489707 RIPOR2Q9Y4F9 1068 aa18.4■□□□□ 0.54
PTK7-216ENST00000489707 MAST3O60307 1309 aa18.39■□□□□ 0.54
PTK7-216ENST00000489707 VPS37CA5D8V6 355 aaPredicted RBP18.39■□□□□ 0.53
PTK7-216ENST00000489707 TTF1Q15361 905 aaPredicted RBP18.39■□□□□ 0.53
PTK7-216ENST00000489707 DHX32Q7L7V1 743 aaKnown RBP18.39■□□□□ 0.53
PTK7-216ENST00000489707 ZNF34Q8IZ26 560 aa18.39■□□□□ 0.53
PTK7-216ENST00000489707 CCDC87Q9NVE4 849 aa18.39■□□□□ 0.53
PTK7-216ENST00000489707 KIF3AQ9Y496 699 aa18.39■□□□□ 0.53
PTK7-216ENST00000489707 HSPD1P10809 573 aaKnown RBP18.39■□□□□ 0.53
PTK7-216ENST00000489707 ST3GAL1Q11201 340 aa18.39■□□□□ 0.53
PTK7-216ENST00000489707 GTF3C6Q969F1 213 aa18.39■□□□□ 0.53
PTK7-216ENST00000489707 CHAMP1Q96JM3 812 aa18.39■□□□□ 0.53
PTK7-216ENST00000489707 GREM2Q9H772 168 aa18.39■□□□□ 0.53
PTK7-216ENST00000489707 ARAP2Q8WZ64 1704 aa18.38■□□□□ 0.53
PTK7-216ENST00000489707 ADAMTS2O95450 1211 aa18.38■□□□□ 0.53
PTK7-216ENST00000489707 EIF5P55010 431 aaKnown RBP18.38■□□□□ 0.53
PTK7-216ENST00000489707 PARP10Q53GL7 1025 aa18.38■□□□□ 0.53
PTK7-216ENST00000489707 BARGINQ6ZT62 677 aa18.38■□□□□ 0.53
PTK7-216ENST00000489707 Q6ZUG5 572 aa18.38■□□□□ 0.53
PTK7-216ENST00000489707 SMARCC1Q92922 1105 aaPredicted RBP18.38■□□□□ 0.53
PTK7-216ENST00000489707 CCDC85AQ96PX6 553 aaPredicted RBP18.38■□□□□ 0.53
PTK7-216ENST00000489707 RBM27Q9P2N5 1060 aaKnown RBP18.38■□□□□ 0.53
PTK7-216ENST00000489707 CNPY2Q9Y2B0 182 aa18.38■□□□□ 0.53
PTK7-216ENST00000489707 ZNF831Q5JPB2 1677 aa18.38■□□□□ 0.53
PTK7-216ENST00000489707 SPATA31A5Q5VU36 1347 aa18.37■□□□□ 0.53
PTK7-216ENST00000489707 MROH5Q6ZUA9 1318 aa18.37■□□□□ 0.53
PTK7-216ENST00000489707 SPATA31A7Q8IWB4 1347 aa18.37■□□□□ 0.53
PTK7-216ENST00000489707 SYCE3A1L190 88 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 129.2 ms