RNA–Protein interactions for RNA: ENST00000488317.1

SRRM1-215, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-215ENST00000488317 GTPBP3Q969Y2 492 aaKnown RBP7.38□□□□□ -1.23
SRRM1-215ENST00000488317 CUEDC1Q9NWM3 386 aaPredicted RBP7.38□□□□□ -1.23
SRRM1-215ENST00000488317 PHF24Q9UPV7 400 aa7.38□□□□□ -1.23
SRRM1-215ENST00000488317 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.38□□□□□ -1.23
SRRM1-215ENST00000488317 USP31Q70CQ4 1352 aa7.37□□□□□ -1.23
SRRM1-215ENST00000488317 LOC105371045A0A1W2PR82 267 aa7.37□□□□□ -1.23
SRRM1-215ENST00000488317 GSTT1P30711 240 aa7.37□□□□□ -1.23
SRRM1-215ENST00000488317 PLAURQ03405 335 aa7.37□□□□□ -1.23
SRRM1-215ENST00000488317 HYAL2Q12891 473 aa7.37□□□□□ -1.23
SRRM1-215ENST00000488317 GNL2Q13823 731 aaKnown RBP7.37□□□□□ -1.23
SRRM1-215ENST00000488317 UBAP2LQ14157 1087 aaKnown RBP7.37□□□□□ -1.23
SRRM1-215ENST00000488317 SF3A1Q15459 793 aaKnown RBP7.37□□□□□ -1.23
SRRM1-215ENST00000488317 GMCL1Q96IK5 515 aa7.37□□□□□ -1.23
SRRM1-215ENST00000488317 SLC30A3Q99726 388 aa7.37□□□□□ -1.23
SRRM1-215ENST00000488317 ACBD3Q9H3P7 528 aa7.37□□□□□ -1.23
SRRM1-215ENST00000488317 EFCC1Q9HA90 598 aa7.37□□□□□ -1.23
SRRM1-215ENST00000488317 TLR7Q9NYK1 1049 aaKnown RBP7.37□□□□□ -1.23
SRRM1-215ENST00000488317 SALL4Q9UJQ4 1053 aa7.37□□□□□ -1.23
SRRM1-215ENST00000488317 TTF2Q9UNY4 1162 aaKnown RBP7.37□□□□□ -1.23
SRRM1-215ENST00000488317 SHROOM4Q9ULL8 1493 aa7.36□□□□□ -1.23
SRRM1-215ENST00000488317 ITGA6P23229 1130 aa7.36□□□□□ -1.23
SRRM1-215ENST00000488317 VEGFBP49765 207 aa7.36□□□□□ -1.23
SRRM1-215ENST00000488317 FCGRTP55899 365 aa7.36□□□□□ -1.23
SRRM1-215ENST00000488317 ZNF394Q53GI3 561 aa7.36□□□□□ -1.23
SRRM1-215ENST00000488317 FOXR1Q6PIV2 292 aa7.36□□□□□ -1.23
SRRM1-215ENST00000488317 USP48Q86UV5 1035 aa7.36□□□□□ -1.23
SRRM1-215ENST00000488317 ZNF654Q8IZM8 581 aa7.36□□□□□ -1.23
SRRM1-215ENST00000488317 ZNF837Q96EG3 531 aaPredicted RBP7.36□□□□□ -1.23
SRRM1-215ENST00000488317 SPACA7Q96KW9 195 aa7.36□□□□□ -1.23
SRRM1-215ENST00000488317 TRERF1Q96PN7 1200 aa7.36□□□□□ -1.23
SRRM1-215ENST00000488317 IGFLR1Q9H665 355 aa7.36□□□□□ -1.23
SRRM1-215ENST00000488317 LIN7BQ9HAP6 207 aa7.36□□□□□ -1.23
SRRM1-215ENST00000488317 ATXN7L1Q9ULK2 861 aaPredicted RBP7.36□□□□□ -1.23
SRRM1-215ENST00000488317 AKAP2Q9Y2D5 859 aa7.36□□□□□ -1.23
SRRM1-215ENST00000488317 ST13P50502 369 aaKnown RBP7.35□□□□□ -1.23
SRRM1-215ENST00000488317 PEAR1Q5VY43 1037 aaPredicted RBP7.35□□□□□ -1.23
SRRM1-215ENST00000488317 DTHD1Q6ZMT9 781 aa7.35□□□□□ -1.23
SRRM1-215ENST00000488317 DHX32Q7L7V1 743 aaKnown RBP7.35□□□□□ -1.23
SRRM1-215ENST00000488317 NSUN5Q96P11 429 aaKnown RBP7.35□□□□□ -1.23
SRRM1-215ENST00000488317 OSMRQ99650 979 aa7.35□□□□□ -1.23
SRRM1-215ENST00000488317 NDFIP2Q9NV92 336 aa7.35□□□□□ -1.23
SRRM1-215ENST00000488317 PRR12Q9ULL5 1215 aa7.35□□□□□ -1.23
SRRM1-215ENST00000488317 PCDHGB7Q9Y5F8 929 aa7.35□□□□□ -1.23
SRRM1-215ENST00000488317 CDC14CA4D256 554 aa7.34□□□□□ -1.23
SRRM1-215ENST00000488317 MAP3K6O95382 1288 aa7.34□□□□□ -1.23
SRRM1-215ENST00000488317 FGFR3P22607 806 aa7.34□□□□□ -1.23
SRRM1-215ENST00000488317 TBC1D8BQ0IIM8 1120 aa7.34□□□□□ -1.23
SRRM1-215ENST00000488317 COL13A1Q5TAT6 717 aaPredicted RBP7.34□□□□□ -1.23
SRRM1-215ENST00000488317 TRIM47Q96LD4 638 aa7.34□□□□□ -1.23
SRRM1-215ENST00000488317 OXCT2Q9BYC2 517 aaPredicted RBP7.34□□□□□ -1.23
SRRM1-215ENST00000488317 GMPR2Q9P2T1 348 aaKnown RBP7.34□□□□□ -1.23
SRRM1-215ENST00000488317 DDX41Q9UJV9 622 aaKnown RBP7.34□□□□□ -1.23
SRRM1-215ENST00000488317 INPP5FQ9Y2H2 1132 aa7.34□□□□□ -1.23
SRRM1-215ENST00000488317 TMEM238LA0A1B0GVL6 79 aa7.33□□□□□ -1.24
SRRM1-215ENST00000488317 SOX18P35713 384 aa7.33□□□□□ -1.24
SRRM1-215ENST00000488317 TNNI2P48788 182 aa7.33□□□□□ -1.24
SRRM1-215ENST00000488317 PTPN12Q05209 780 aaKnown RBP7.33□□□□□ -1.24
SRRM1-215ENST00000488317 GLIS3Q8NEA6 775 aa7.33□□□□□ -1.24
SRRM1-215ENST00000488317 ZKSCAN3Q9BRR0 538 aa7.33□□□□□ -1.24
SRRM1-215ENST00000488317 TANGO6Q9C0B7 1094 aa7.33□□□□□ -1.24
SRRM1-215ENST00000488317 HCN2Q9UL51 889 aa7.33□□□□□ -1.24
SRRM1-215ENST00000488317 GPR25O00155 361 aa7.32□□□□□ -1.24
SRRM1-215ENST00000488317 TRPA1O75762 1119 aa7.32□□□□□ -1.24
SRRM1-215ENST00000488317 KIF4AO95239 1232 aa7.32□□□□□ -1.24
SRRM1-215ENST00000488317 XRCC5P13010 732 aaKnown RBP7.32□□□□□ -1.24
SRRM1-215ENST00000488317 ACPPP15309 386 aa7.32□□□□□ -1.24
SRRM1-215ENST00000488317 RACK1P63244 317 aaKnown RBP7.32□□□□□ -1.24
SRRM1-215ENST00000488317 MLLT1Q03111 559 aaPredicted RBP7.32□□□□□ -1.24
SRRM1-215ENST00000488317 CCDC85BQ15834 202 aaPredicted RBP7.32□□□□□ -1.24
SRRM1-215ENST00000488317 VWA5B2Q8N398 1253 aa7.32□□□□□ -1.24
SRRM1-215ENST00000488317 TINF2Q9BSI4 451 aa7.32□□□□□ -1.24
SRRM1-215ENST00000488317 IRX2Q9BZI1 471 aaPredicted RBP7.32□□□□□ -1.24
SRRM1-215ENST00000488317 LOC102724428A0A0B4J2F2 783 aa7.31□□□□□ -1.24
SRRM1-215ENST00000488317 J3QW42 95 aa7.31□□□□□ -1.24
SRRM1-215ENST00000488317 NRLP54845 237 aa7.31□□□□□ -1.24
SRRM1-215ENST00000488317 SIK1P57059 783 aa7.31□□□□□ -1.24
SRRM1-215ENST00000488317 CTBSQ01459 385 aa7.31□□□□□ -1.24
SRRM1-215ENST00000488317 FAM182BQ5T319 152 aa7.31□□□□□ -1.24
SRRM1-215ENST00000488317 PRPF40BQ6NWY9 871 aaKnown RBP7.31□□□□□ -1.24
SRRM1-215ENST00000488317 HFE2Q6ZVN8 426 aa7.31□□□□□ -1.24
SRRM1-215ENST00000488317 RELL1Q8IUW5 271 aa7.31□□□□□ -1.24
SRRM1-215ENST00000488317 CCNJLQ8IV13 435 aa7.31□□□□□ -1.24
SRRM1-215ENST00000488317 CEP120Q8N960 986 aa7.31□□□□□ -1.24
SRRM1-215ENST00000488317 UBXN4Q92575 508 aa7.31□□□□□ -1.24
SRRM1-215ENST00000488317 TCF12Q99081 682 aa7.31□□□□□ -1.24
SRRM1-215ENST00000488317 UBE2OQ9C0C9 1292 aaKnown RBP7.31□□□□□ -1.24
SRRM1-215ENST00000488317 C11orf95C9JLR9 678 aaPredicted RBP7.3□□□□□ -1.24
SRRM1-215ENST00000488317 GHRHP01286 108 aa7.3□□□□□ -1.24
SRRM1-215ENST00000488317 SNRPBP14678 240 aaKnown RBP7.3□□□□□ -1.24
SRRM1-215ENST00000488317 DNAJA1P31689 397 aaKnown RBP7.3□□□□□ -1.24
SRRM1-215ENST00000488317 SV2AQ7L0J3 742 aa7.3□□□□□ -1.24
SRRM1-215ENST00000488317 VPS37DQ86XT2 251 aa7.3□□□□□ -1.24
SRRM1-215ENST00000488317 SLC43A3Q8NBI5 491 aa7.3□□□□□ -1.24
SRRM1-215ENST00000488317 C3orf58Q8NDZ4 430 aa7.3□□□□□ -1.24
SRRM1-215ENST00000488317 ASAP3Q8TDY4 903 aa7.3□□□□□ -1.24
SRRM1-215ENST00000488317 NOC4LQ9BVI4 516 aaKnown RBP7.3□□□□□ -1.24
SRRM1-215ENST00000488317 RBSNQ9H1K0 784 aa7.3□□□□□ -1.24
SRRM1-215ENST00000488317 ZFYVE1Q9HBF4 777 aa7.3□□□□□ -1.24
SRRM1-215ENST00000488317 SRA1Q9HD15 236 aaKnown RBP7.3□□□□□ -1.24
SRRM1-215ENST00000488317 ABCB6Q9NP58 842 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms