RNA–Protein interactions for RNA: ENST00000488214.1

PDAP1-203, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-203ENST00000488214 MFAP1P55081 439 aaKnown RBP8.46□□□□□ -1.06
PDAP1-203ENST00000488214 PRR5LQ6MZQ0 368 aa8.46□□□□□ -1.06
PDAP1-203ENST00000488214 CASC1Q6TDU7 716 aa8.46□□□□□ -1.06
PDAP1-203ENST00000488214 LDHAL6AQ6ZMR3 332 aa8.46□□□□□ -1.06
PDAP1-203ENST00000488214 PI4K2BQ8TCG2 481 aa8.46□□□□□ -1.06
PDAP1-203ENST00000488214 CDC5LQ99459 802 aaKnown RBP8.46□□□□□ -1.06
PDAP1-203ENST00000488214 MPHOSPH8Q99549 860 aa8.46□□□□□ -1.06
PDAP1-203ENST00000488214 DBNDD2Q9BQY9 259 aa8.46□□□□□ -1.06
PDAP1-203ENST00000488214 CEP126Q9P2H0 1117 aa8.46□□□□□ -1.06
PDAP1-203ENST00000488214 DBNLQ9UJU6 430 aaKnown RBP8.46□□□□□ -1.06
PDAP1-203ENST00000488214 AKAP11Q9UKA4 1901 aa8.46□□□□□ -1.06
PDAP1-203ENST00000488214 MAST2Q6P0Q8 1798 aa8.45□□□□□ -1.06
PDAP1-203ENST00000488214 A0A1B0GUL7 405 aa8.45□□□□□ -1.06
PDAP1-203ENST00000488214 POLRMTO00411 1230 aaKnown RBP8.45□□□□□ -1.06
PDAP1-203ENST00000488214 GLRX3O76003 335 aaKnown RBP8.45□□□□□ -1.06
PDAP1-203ENST00000488214 SERPINB2P05120 415 aa8.45□□□□□ -1.06
PDAP1-203ENST00000488214 SLC15A2Q16348 729 aa8.45□□□□□ -1.06
PDAP1-203ENST00000488214 ATP2B3Q16720 1220 aa8.45□□□□□ -1.06
PDAP1-203ENST00000488214 TBC1D9Q6ZT07 1266 aa8.45□□□□□ -1.06
PDAP1-203ENST00000488214 RILPL2Q969X0 211 aa8.45□□□□□ -1.06
PDAP1-203ENST00000488214 NEUROD6Q96NK8 337 aa8.45□□□□□ -1.06
PDAP1-203ENST00000488214 NLRP3Q96P20 1036 aa8.45□□□□□ -1.06
PDAP1-203ENST00000488214 UPF2Q9HAU5 1272 aaKnown RBP8.45□□□□□ -1.06
PDAP1-203ENST00000488214 MROH5Q6ZUA9 1318 aa8.45□□□□□ -1.06
PDAP1-203ENST00000488214 LTBP1Q14766 1721 aa8.44□□□□□ -1.06
PDAP1-203ENST00000488214 MMP10P09238 476 aa8.44□□□□□ -1.06
PDAP1-203ENST00000488214 SF3B3Q15393 1217 aaKnown RBP8.44□□□□□ -1.06
PDAP1-203ENST00000488214 SLC10A5Q5PT55 438 aa8.44□□□□□ -1.06
PDAP1-203ENST00000488214 ANKRD18AQ8IVF6 992 aa8.44□□□□□ -1.06
PDAP1-203ENST00000488214 CNTROBQ8N137 903 aa8.44□□□□□ -1.06
PDAP1-203ENST00000488214 GPR108Q9NPR9 543 aa8.44□□□□□ -1.06
PDAP1-203ENST00000488214 AKAP2Q9Y2D5 859 aa8.44□□□□□ -1.06
PDAP1-203ENST00000488214 NPM3O75607 178 aaKnown RBP8.43□□□□□ -1.06
PDAP1-203ENST00000488214 SEC24BO95487 1268 aa8.43□□□□□ -1.06
PDAP1-203ENST00000488214 TM4SF1P30408 202 aa8.43□□□□□ -1.06
PDAP1-203ENST00000488214 ADORA1P30542 326 aa8.43□□□□□ -1.06
PDAP1-203ENST00000488214 ANP32AP39687 249 aaKnown RBP8.43□□□□□ -1.06
PDAP1-203ENST00000488214 PUM3Q15397 648 aaKnown RBP8.43□□□□□ -1.06
PDAP1-203ENST00000488214 GORABQ5T7V8 394 aa8.43□□□□□ -1.06
PDAP1-203ENST00000488214 DDX46Q7L014 1031 aaKnown RBP8.43□□□□□ -1.06
PDAP1-203ENST00000488214 NLGN1Q8N2Q7 840 aa8.43□□□□□ -1.06
PDAP1-203ENST00000488214 VGLL2Q8N8G2 317 aa8.43□□□□□ -1.06
PDAP1-203ENST00000488214 HELBQ8NG08 1087 aaPredicted RBP8.43□□□□□ -1.06
PDAP1-203ENST00000488214 RPGRQ92834 1020 aaKnown RBP8.43□□□□□ -1.06
PDAP1-203ENST00000488214 CELF1Q92879 486 aaKnown RBP8.43□□□□□ -1.06
PDAP1-203ENST00000488214 DNAJC2Q99543 621 aaKnown RBP8.43□□□□□ -1.06
PDAP1-203ENST00000488214 RIPOR2Q9Y4F9 1068 aa8.43□□□□□ -1.06
PDAP1-203ENST00000488214 PARP3Q9Y6F1 533 aa8.43□□□□□ -1.06
PDAP1-203ENST00000488214 KIF13BQ9NQT8 1826 aa8.43□□□□□ -1.06
PDAP1-203ENST00000488214 TAF5LO75529 589 aa8.42□□□□□ -1.06
PDAP1-203ENST00000488214 SLC5A1P13866 664 aa8.42□□□□□ -1.06
PDAP1-203ENST00000488214 TIMM10P62072 90 aa8.42□□□□□ -1.06
PDAP1-203ENST00000488214 CHRNDQ07001 517 aa8.42□□□□□ -1.06
PDAP1-203ENST00000488214 TTC39AQ5SRH9 613 aa8.42□□□□□ -1.06
PDAP1-203ENST00000488214 XAGE2Q96GT9 111 aa8.42□□□□□ -1.06
PDAP1-203ENST00000488214 FSD1Q9BTV5 496 aa8.42□□□□□ -1.06
PDAP1-203ENST00000488214 BOLA2Q9H3K6 86 aa8.42□□□□□ -1.06
PDAP1-203ENST00000488214 NDUFB9Q9Y6M9 179 aa8.42□□□□□ -1.06
PDAP1-203ENST00000488214 CCDC88AQ3V6T2 1871 aa8.41□□□□□ -1.06
PDAP1-203ENST00000488214 KIAA1551Q9HCM1 1747 aa8.41□□□□□ -1.06
PDAP1-203ENST00000488214 RFX7Q2KHR2 1363 aa8.41□□□□□ -1.06
PDAP1-203ENST00000488214 PDE8BO95263 885 aa8.41□□□□□ -1.06
PDAP1-203ENST00000488214 ATP5JP18859 108 aa8.41□□□□□ -1.06
PDAP1-203ENST00000488214 EVI5LQ96CN4 794 aa8.41□□□□□ -1.06
PDAP1-203ENST00000488214 DIAPH3Q9NSV4 1193 aa8.41□□□□□ -1.06
PDAP1-203ENST00000488214 DUOX1Q9NRD9 1551 aa8.4□□□□□ -1.06
PDAP1-203ENST00000488214 C10orf71Q711Q0 1435 aa8.4□□□□□ -1.06
PDAP1-203ENST00000488214 IFIT1P09914 478 aaKnown RBP8.4□□□□□ -1.06
PDAP1-203ENST00000488214 CHMLP26374 656 aa8.4□□□□□ -1.06
PDAP1-203ENST00000488214 KCNJ4P48050 445 aa8.4□□□□□ -1.06
PDAP1-203ENST00000488214 GRAPQ13588 217 aa8.4□□□□□ -1.06
PDAP1-203ENST00000488214 CCDC158Q5M9N0 1113 aa8.4□□□□□ -1.06
PDAP1-203ENST00000488214 CCDC125Q86Z20 511 aa8.4□□□□□ -1.06
PDAP1-203ENST00000488214 GRAPLQ8TC17 118 aaPredicted RBP8.4□□□□□ -1.06
PDAP1-203ENST00000488214 LPIN2Q92539 896 aa8.4□□□□□ -1.06
PDAP1-203ENST00000488214 EDC3Q96F86 508 aaKnown RBP8.4□□□□□ -1.06
PDAP1-203ENST00000488214 RBM17Q96I25 401 aaKnown RBP8.4□□□□□ -1.06
PDAP1-203ENST00000488214 BSDC1Q9NW68 430 aaPredicted RBP8.4□□□□□ -1.06
PDAP1-203ENST00000488214 SLX4Q8IY92 1834 aa8.4□□□□□ -1.07
PDAP1-203ENST00000488214 BRCA1P38398 1863 aaKnown RBP8.39□□□□□ -1.07
PDAP1-203ENST00000488214 SNAP23O00161 211 aa8.39□□□□□ -1.07
PDAP1-203ENST00000488214 GOLIM4O00461 696 aa8.39□□□□□ -1.07
PDAP1-203ENST00000488214 EIF5BO60841 1220 aaKnown RBP8.39□□□□□ -1.07
PDAP1-203ENST00000488214 FGFR2P21802 821 aa8.39□□□□□ -1.07
PDAP1-203ENST00000488214 RPS8P62241 208 aaKnown RBP8.39□□□□□ -1.07
PDAP1-203ENST00000488214 CRY2Q49AN0 593 aa8.39□□□□□ -1.07
PDAP1-203ENST00000488214 SLC51AQ86UW1 340 aa8.39□□□□□ -1.07
PDAP1-203ENST00000488214 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.39□□□□□ -1.07
PDAP1-203ENST00000488214 TBC1D32Q96NH3 1257 aa8.39□□□□□ -1.07
PDAP1-203ENST00000488214 HAUS7Q99871 368 aa8.39□□□□□ -1.07
PDAP1-203ENST00000488214 ESYT1Q9BSJ8 1104 aa8.39□□□□□ -1.07
PDAP1-203ENST00000488214 C22orf23Q9BZE7 217 aa8.39□□□□□ -1.07
PDAP1-203ENST00000488214 PDGFDQ9GZP0 370 aaPredicted RBP8.39□□□□□ -1.07
PDAP1-203ENST00000488214 PAG1Q9NWQ8 432 aa8.39□□□□□ -1.07
PDAP1-203ENST00000488214 MINPP1Q9UNW1 487 aa8.39□□□□□ -1.07
PDAP1-203ENST00000488214 CHD4Q14839 1912 aa8.39□□□□□ -1.07
PDAP1-203ENST00000488214 COL1A1P02452 1464 aaPredicted RBP8.38□□□□□ -1.07
PDAP1-203ENST00000488214 LAMA4Q16363 1823 aa8.38□□□□□ -1.07
PDAP1-203ENST00000488214 RAD50Q92878 1312 aa8.38□□□□□ -1.07
PDAP1-203ENST00000488214 HIP1O00291 1037 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms