RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 BRIP1Q9BX63 1249 aa8.6□□□□□ -1.03
UBR4-214ENST00000486515 PLA2G12BQ9BX93 195 aa8.6□□□□□ -1.03
UBR4-214ENST00000486515 TSKSQ9UJT2 592 aa8.6□□□□□ -1.03
UBR4-214ENST00000486515 CACNA1FO60840 1977 aa8.6□□□□□ -1.03
UBR4-214ENST00000486515 ANKRD36CQ5JPF3 1778 aa8.59□□□□□ -1.03
UBR4-214ENST00000486515 A0A0G2JLW4 131 aa8.59□□□□□ -1.03
UBR4-214ENST00000486515 GLTPD2A6NH11 291 aa8.59□□□□□ -1.03
UBR4-214ENST00000486515 TMEM88BA6NKF7 163 aa8.59□□□□□ -1.03
UBR4-214ENST00000486515 RAB11FIP3O75154 756 aa8.59□□□□□ -1.03
UBR4-214ENST00000486515 ITGA6P23229 1130 aa8.59□□□□□ -1.03
UBR4-214ENST00000486515 ALDH1B1P30837 517 aa8.59□□□□□ -1.03
UBR4-214ENST00000486515 HDAC1Q13547 482 aaPredicted RBP8.59□□□□□ -1.03
UBR4-214ENST00000486515 SLC10A5Q5PT55 438 aa8.59□□□□□ -1.03
UBR4-214ENST00000486515 B4GALNT3Q6L9W6 998 aa8.59□□□□□ -1.03
UBR4-214ENST00000486515 LDHAL6AQ6ZMR3 332 aa8.59□□□□□ -1.03
UBR4-214ENST00000486515 BCL11AQ9H165 835 aa8.59□□□□□ -1.03
UBR4-214ENST00000486515 CNNM1Q9NRU3 951 aa8.59□□□□□ -1.03
UBR4-214ENST00000486515 WDR33Q9C0J8 1336 aaKnown RBP8.58□□□□□ -1.04
UBR4-214ENST00000486515 APBB1O00213 710 aa8.58□□□□□ -1.04
UBR4-214ENST00000486515 CASP7P55210 303 aa8.58□□□□□ -1.04
UBR4-214ENST00000486515 FOXO4P98177 505 aa8.58□□□□□ -1.04
UBR4-214ENST00000486515 DDR1Q08345 913 aa8.58□□□□□ -1.04
UBR4-214ENST00000486515 MTX1Q13505 466 aa8.58□□□□□ -1.04
UBR4-214ENST00000486515 SF3B3Q15393 1217 aaKnown RBP8.58□□□□□ -1.04
UBR4-214ENST00000486515 RABL6Q3YEC7 729 aaPredicted RBP8.58□□□□□ -1.04
UBR4-214ENST00000486515 CCDC24Q8N4L8 307 aa8.58□□□□□ -1.04
UBR4-214ENST00000486515 TTLL11Q8NHH1 800 aa8.58□□□□□ -1.04
UBR4-214ENST00000486515 ZNF622Q969S3 477 aaKnown RBP eCLIP8.58□□□□□ -1.04
UBR4-214ENST00000486515 FBXO3Q9UK99 471 aa8.58□□□□□ -1.04
UBR4-214ENST00000486515 PCDHB15Q9Y5E8 787 aa8.58□□□□□ -1.04
UBR4-214ENST00000486515 CSF1RP07333 972 aa8.57□□□□□ -1.04
UBR4-214ENST00000486515 NPR1P16066 1061 aa8.57□□□□□ -1.04
UBR4-214ENST00000486515 KCNJ4P48050 445 aa8.57□□□□□ -1.04
UBR4-214ENST00000486515 MNX1P50219 401 aaPredicted RBP8.57□□□□□ -1.04
UBR4-214ENST00000486515 TGFB2P61812 414 aa8.57□□□□□ -1.04
UBR4-214ENST00000486515 DEFB115Q30KQ5 88 aa8.57□□□□□ -1.04
UBR4-214ENST00000486515 ANKRD45Q5TZF3 282 aa8.57□□□□□ -1.04
UBR4-214ENST00000486515 TMC4Q7Z404 712 aa8.57□□□□□ -1.04
UBR4-214ENST00000486515 C2CD5Q86YS7 1000 aa8.57□□□□□ -1.04
UBR4-214ENST00000486515 SYNE4Q8N205 404 aa8.57□□□□□ -1.04
UBR4-214ENST00000486515 CLASRPQ8N2M8 674 aaKnown RBP8.57□□□□□ -1.04
UBR4-214ENST00000486515 SSH3Q8TE77 659 aa8.57□□□□□ -1.04
UBR4-214ENST00000486515 KIF1BPQ96EK5 621 aa8.57□□□□□ -1.04
UBR4-214ENST00000486515 MASTLQ96GX5 879 aa8.57□□□□□ -1.04
UBR4-214ENST00000486515 GPATCH3Q96I76 525 aa8.57□□□□□ -1.04
UBR4-214ENST00000486515 LRRCC1Q9C099 1032 aa8.57□□□□□ -1.04
UBR4-214ENST00000486515 SIL1Q9H173 461 aa8.57□□□□□ -1.04
UBR4-214ENST00000486515 GREM2Q9H772 168 aa8.57□□□□□ -1.04
UBR4-214ENST00000486515 CEP126Q9P2H0 1117 aa8.57□□□□□ -1.04
UBR4-214ENST00000486515 AKAP2Q9Y2D5 859 aa8.57□□□□□ -1.04
UBR4-214ENST00000486515 ZC3H4Q9UPT8 1303 aaKnown RBP8.56□□□□□ -1.04
UBR4-214ENST00000486515 PNMA6EA0A0J9YXQ4 647 aa8.56□□□□□ -1.04
UBR4-214ENST00000486515 RASSF10A6NK89 507 aa8.56□□□□□ -1.04
UBR4-214ENST00000486515 BBOX1O75936 387 aa8.56□□□□□ -1.04
UBR4-214ENST00000486515 IL15P40933 162 aaPredicted RBP8.56□□□□□ -1.04
UBR4-214ENST00000486515 RPS8P62241 208 aaKnown RBP8.56□□□□□ -1.04
UBR4-214ENST00000486515 GRAPQ13588 217 aa8.56□□□□□ -1.04
UBR4-214ENST00000486515 METTL24Q5JXM2 366 aa8.56□□□□□ -1.04
UBR4-214ENST00000486515 GORABQ5T7V8 394 aa8.56□□□□□ -1.04
UBR4-214ENST00000486515 GRAPLQ8TC17 118 aaPredicted RBP8.56□□□□□ -1.04
UBR4-214ENST00000486515 CNKSR1Q969H4 720 aa8.56□□□□□ -1.04
UBR4-214ENST00000486515 EXOC6BQ9Y2D4 811 aa8.56□□□□□ -1.04
UBR4-214ENST00000486515 MROH5Q6ZUA9 1318 aa8.55□□□□□ -1.04
UBR4-214ENST00000486515 NUP98P52948 1817 aa8.55□□□□□ -1.04
UBR4-214ENST00000486515 CIAO1O76071 339 aa8.55□□□□□ -1.04
UBR4-214ENST00000486515 IFIT2P09913 472 aaKnown RBP8.55□□□□□ -1.04
UBR4-214ENST00000486515 POLA2Q14181 598 aa8.55□□□□□ -1.04
UBR4-214ENST00000486515 EPHA10Q5JZY3 1008 aa8.55□□□□□ -1.04
UBR4-214ENST00000486515 CRAMP1Q96RY5 1269 aa8.55□□□□□ -1.04
UBR4-214ENST00000486515 ANKRD2Q9GZV1 360 aa8.55□□□□□ -1.04
UBR4-214ENST00000486515 DCTPP1Q9H773 170 aa8.55□□□□□ -1.04
UBR4-214ENST00000486515 COPRSQ9NQ92 184 aa8.55□□□□□ -1.04
UBR4-214ENST00000486515 ANKIB1Q9P2G1 1089 aa8.55□□□□□ -1.04
UBR4-214ENST00000486515 PASKQ96RG2 1323 aa8.54□□□□□ -1.04
UBR4-214ENST00000486515 RTL9Q8NET4 1388 aa8.54□□□□□ -1.04
UBR4-214ENST00000486515 ABCC12Q96J65 1359 aa8.54□□□□□ -1.04
UBR4-214ENST00000486515 POTECB2RU33 542 aa8.54□□□□□ -1.04
UBR4-214ENST00000486515 G3V3G9 751 aa8.54□□□□□ -1.04
UBR4-214ENST00000486515 EYA2O00167 538 aa8.54□□□□□ -1.04
UBR4-214ENST00000486515 PPEF1O14829 653 aaPredicted RBP8.54□□□□□ -1.04
UBR4-214ENST00000486515 SRGNP10124 158 aa8.54□□□□□ -1.04
UBR4-214ENST00000486515 DPEP1P16444 411 aa8.54□□□□□ -1.04
UBR4-214ENST00000486515 PTPN12Q05209 780 aaKnown RBP8.54□□□□□ -1.04
UBR4-214ENST00000486515 DCAF8Q5TAQ9 597 aa8.54□□□□□ -1.04
UBR4-214ENST00000486515 SOGA3Q5TF21 947 aa8.54□□□□□ -1.04
UBR4-214ENST00000486515 STYK1Q6J9G0 422 aa8.54□□□□□ -1.04
UBR4-214ENST00000486515 KAZALD1Q96I82 304 aa8.54□□□□□ -1.04
UBR4-214ENST00000486515 BSDC1Q9NW68 430 aaPredicted RBP8.54□□□□□ -1.04
UBR4-214ENST00000486515 PA2G4Q9UQ80 394 aaKnown RBP8.54□□□□□ -1.04
UBR4-214ENST00000486515 NOP58Q9Y2X3 529 aaKnown RBP8.54□□□□□ -1.04
UBR4-214ENST00000486515 SZT2Q5T011 3432 aa8.54□□□□□ -1.04
UBR4-214ENST00000486515 RIC1Q4ADV7 1423 aa8.54□□□□□ -1.04
UBR4-214ENST00000486515 IGHDP01880 384 aa8.53□□□□□ -1.04
UBR4-214ENST00000486515 IFIT1P09914 478 aaKnown RBP8.53□□□□□ -1.04
UBR4-214ENST00000486515 MAPK8IP2Q13387 824 aaPredicted RBP8.53□□□□□ -1.04
UBR4-214ENST00000486515 CRY2Q49AN0 593 aa8.53□□□□□ -1.04
UBR4-214ENST00000486515 GRIPAP1Q4V328 841 aa8.53□□□□□ -1.04
UBR4-214ENST00000486515 CAVIN4Q5BKX8 364 aa8.53□□□□□ -1.04
UBR4-214ENST00000486515 CHD1LQ86WJ1 897 aa8.53□□□□□ -1.04
UBR4-214ENST00000486515 VPS37DQ86XT2 251 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms