RNA–Protein interactions for RNA: ENST00000485790.1

SCAF4-206, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 2

Gene SCAF4, Length 1,282 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-206ENST00000485790 TSPYL6Q8N831 410 aa17.64■□□□□ 0.41
SCAF4-206ENST00000485790 TSR2Q969E8 191 aaKnown RBP17.64■□□□□ 0.41
SCAF4-206ENST00000485790 CDC5LQ99459 802 aaKnown RBP17.64■□□□□ 0.41
SCAF4-206ENST00000485790 SEC31BQ9NQW1 1179 aa17.64■□□□□ 0.41
SCAF4-206ENST00000485790 ZBTB12Q9Y330 459 aaPredicted RBP17.64■□□□□ 0.41
SCAF4-206ENST00000485790 TLL2Q9Y6L7 1015 aa17.64■□□□□ 0.41
SCAF4-206ENST00000485790 COL4A5P29400 1685 aa17.64■□□□□ 0.41
SCAF4-206ENST00000485790 ECE2O60344 883 aa17.63■□□□□ 0.41
SCAF4-206ENST00000485790 UFL1O94874 794 aa17.63■□□□□ 0.41
SCAF4-206ENST00000485790 MAP2K2P36507 400 aa17.63■□□□□ 0.41
SCAF4-206ENST00000485790 HIRAP54198 1017 aaPredicted RBP17.63■□□□□ 0.41
SCAF4-206ENST00000485790 FMR1Q06787 632 aaKnown RBP eCLIP17.63■□□□□ 0.412e-6■■□□□ 12.9
SCAF4-206ENST00000485790 JARID2Q92833 1246 aaPredicted RBP17.63■□□□□ 0.41
SCAF4-206ENST00000485790 DCPSQ96C86 337 aaKnown RBP17.63■□□□□ 0.41
SCAF4-206ENST00000485790 GLIS2Q9BZE0 524 aaPredicted RBP17.63■□□□□ 0.41
SCAF4-206ENST00000485790 MRS2Q9HD23 443 aa17.63■□□□□ 0.41
SCAF4-206ENST00000485790 IL16Q14005 1332 aa17.63■□□□□ 0.41
SCAF4-206ENST00000485790 RBM26Q5T8P6 1007 aaKnown RBP17.62■□□□□ 0.41
SCAF4-206ENST00000485790 USP48Q86UV5 1035 aa17.62■□□□□ 0.41
SCAF4-206ENST00000485790 HHIPL1Q96JK4 782 aa17.62■□□□□ 0.41
SCAF4-206ENST00000485790 CCDC85AQ96PX6 553 aaPredicted RBP17.62■□□□□ 0.41
SCAF4-206ENST00000485790 VIL1P09327 827 aaKnown RBP17.61■□□□□ 0.41
SCAF4-206ENST00000485790 ATP2B4P23634 1241 aa17.61■□□□□ 0.41
SCAF4-206ENST00000485790 LBX1P52954 281 aa17.61■□□□□ 0.41
SCAF4-206ENST00000485790 CYP4F22Q6NT55 531 aa17.61■□□□□ 0.41
SCAF4-206ENST00000485790 SAMD7Q7Z3H4 446 aa17.61■□□□□ 0.41
SCAF4-206ENST00000485790 SAPCD2Q86UD0 394 aa17.61■□□□□ 0.41
SCAF4-206ENST00000485790 ZNF408Q9H9D4 720 aa17.61■□□□□ 0.41
SCAF4-206ENST00000485790 TBC1D10BQ4KMP7 808 aaPredicted RBP17.6■□□□□ 0.41
SCAF4-206ENST00000485790 CCDC184Q52MB2 194 aa17.6■□□□□ 0.41
SCAF4-206ENST00000485790 WDR63Q8IWG1 891 aa17.6■□□□□ 0.41
SCAF4-206ENST00000485790 TRPM4Q8TD43 1214 aa17.6■□□□□ 0.41
SCAF4-206ENST00000485790 KCNQ5Q9NR82 932 aa17.6■□□□□ 0.41
SCAF4-206ENST00000485790 XDHP47989 1333 aa17.6■□□□□ 0.41
SCAF4-206ENST00000485790 CTSWP56202 376 aa17.59■□□□□ 0.41
SCAF4-206ENST00000485790 KRT26Q7Z3Y9 468 aa17.59■□□□□ 0.41
SCAF4-206ENST00000485790 PODNQ7Z5L7 613 aa17.59■□□□□ 0.41
SCAF4-206ENST00000485790 BSDC1Q9NW68 430 aaPredicted RBP17.59■□□□□ 0.41
SCAF4-206ENST00000485790 ZNF316A6NFI3 1004 aaPredicted RBP17.58■□□□□ 0.4
SCAF4-206ENST00000485790 H7C1W4 665 aa17.58■□□□□ 0.4
SCAF4-206ENST00000485790 IGKV5-2P06315 115 aa17.58■□□□□ 0.4
SCAF4-206ENST00000485790 C2orf69Q8N8R5 385 aa17.58■□□□□ 0.4
SCAF4-206ENST00000485790 AGBL3Q8NEM8 1001 aa17.58■□□□□ 0.4
SCAF4-206ENST00000485790 TTLL11Q8NHH1 800 aa17.58■□□□□ 0.4
SCAF4-206ENST00000485790 MYH16Q9H6N6 1097 aa17.58■□□□□ 0.4
SCAF4-206ENST00000485790 NEURL1BA8MQ27 555 aa17.57■□□□□ 0.4
SCAF4-206ENST00000485790 CA12O43570 354 aa17.57■□□□□ 0.4
SCAF4-206ENST00000485790 IGHMBP2P38935 993 aaKnown RBP17.57■□□□□ 0.4
SCAF4-206ENST00000485790 SULF1Q8IWU6 871 aa17.57■□□□□ 0.4
SCAF4-206ENST00000485790 SALL2Q9Y467 1007 aaPredicted RBP17.57■□□□□ 0.4
SCAF4-206ENST00000485790 SHTN1A0MZ66 631 aa17.56■□□□□ 0.4
SCAF4-206ENST00000485790 USP17L3A6NCW0 530 aa17.56■□□□□ 0.4
SCAF4-206ENST00000485790 USP17L4A6NCW7 530 aa17.56■□□□□ 0.4
SCAF4-206ENST00000485790 FKBP5Q13451 457 aaPredicted RBP17.56■□□□□ 0.4
SCAF4-206ENST00000485790 CWF19L2Q2TBE0 894 aaKnown RBP17.56■□□□□ 0.4
SCAF4-206ENST00000485790 RSBN1LQ6PCB5 846 aaPredicted RBP17.56■□□□□ 0.4
SCAF4-206ENST00000485790 USP17L1Q7RTZ2 530 aa17.56■□□□□ 0.4
SCAF4-206ENST00000485790 MINPP1Q9UNW1 487 aa17.56■□□□□ 0.4
SCAF4-206ENST00000485790 USP17L8P0C7I0 530 aa17.55■□□□□ 0.4
SCAF4-206ENST00000485790 HSPA8P11142 646 aaKnown RBP17.55■□□□□ 0.4
SCAF4-206ENST00000485790 HUNKP57058 714 aa17.55■□□□□ 0.4
SCAF4-206ENST00000485790 FLIIQ13045 1269 aa17.55■□□□□ 0.4
SCAF4-206ENST00000485790 GCKRQ14397 625 aa17.55■□□□□ 0.4
SCAF4-206ENST00000485790 KIF4BQ2VIQ3 1234 aa17.55■□□□□ 0.4
SCAF4-206ENST00000485790 G2E3Q7L622 706 aa17.55■□□□□ 0.4
SCAF4-206ENST00000485790 UBE3BQ7Z3V4 1068 aa17.55■□□□□ 0.4
SCAF4-206ENST00000485790 LINS1Q8NG48 757 aa17.55■□□□□ 0.4
SCAF4-206ENST00000485790 CCDC102AQ96A19 550 aa17.55■□□□□ 0.4
SCAF4-206ENST00000485790 MPHOSPH8Q99549 860 aa17.55■□□□□ 0.4
SCAF4-206ENST00000485790 ANKRD2Q9GZV1 360 aa17.55■□□□□ 0.4
SCAF4-206ENST00000485790 LEMD3Q9Y2U8 911 aa17.55■□□□□ 0.4
SCAF4-206ENST00000485790 ADAMTSL1Q8N6G6 1762 aa17.55■□□□□ 0.4
SCAF4-206ENST00000485790 AOC2O75106 756 aa17.54■□□□□ 0.4
SCAF4-206ENST00000485790 NOGQ13253 232 aa17.54■□□□□ 0.4
SCAF4-206ENST00000485790 OGFOD1Q8N543 542 aa17.54■□□□□ 0.4
SCAF4-206ENST00000485790 DNAAF4Q8WXU2 420 aa17.54■□□□□ 0.4
SCAF4-206ENST00000485790 GREM2Q9H772 168 aa17.54■□□□□ 0.4
SCAF4-206ENST00000485790 ANKRD36CQ5JPF3 1778 aa17.53■□□□□ 0.4
SCAF4-206ENST00000485790 VAMP4O75379 141 aa17.53■□□□□ 0.4
SCAF4-206ENST00000485790 MMP14P50281 582 aa17.53■□□□□ 0.4
SCAF4-206ENST00000485790 ZNF280AP59817 542 aaPredicted RBP17.53■□□□□ 0.4
SCAF4-206ENST00000485790 SCARF1Q14162 830 aa17.53■□□□□ 0.4
SCAF4-206ENST00000485790 GBA2Q9HCG7 927 aaPredicted RBP17.53■□□□□ 0.4
SCAF4-206ENST00000485790 RTL9Q8NET4 1388 aa17.53■□□□□ 0.4
SCAF4-206ENST00000485790 CCT4P50991 539 aaKnown RBP17.52■□□□□ 0.4
SCAF4-206ENST00000485790 BRPF1P55201 1214 aaPredicted RBP17.52■□□□□ 0.4
SCAF4-206ENST00000485790 PLA2G12BQ9BX93 195 aa17.52■□□□□ 0.4
SCAF4-206ENST00000485790 COA1Q9GZY4 146 aa17.52■□□□□ 0.4
SCAF4-206ENST00000485790 LTBP1Q14766 1721 aa17.52■□□□□ 0.39
SCAF4-206ENST00000485790 EGFRP00533 1210 aa17.51■□□□□ 0.39
SCAF4-206ENST00000485790 ITGA6P23229 1130 aa17.51■□□□□ 0.39
SCAF4-206ENST00000485790 KCNJ4P48050 445 aa17.51■□□□□ 0.39
SCAF4-206ENST00000485790 EXOSC9Q06265 439 aaKnown RBP17.51■□□□□ 0.39
SCAF4-206ENST00000485790 RGMBQ6NW40 437 aa17.51■□□□□ 0.39
SCAF4-206ENST00000485790 FANCIQ9NVI1 1328 aa17.5■□□□□ 0.39
SCAF4-206ENST00000485790 ANKRD18BA2A2Z9 1011 aa17.5■□□□□ 0.39
SCAF4-206ENST00000485790 CSF1RP07333 972 aa17.5■□□□□ 0.39
SCAF4-206ENST00000485790 ZNF157P51786 506 aaPredicted RBP17.5■□□□□ 0.39
SCAF4-206ENST00000485790 MYOZ2Q9NPC6 264 aa17.5■□□□□ 0.39
SCAF4-206ENST00000485790 ADM5C9JUS6 153 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms