RNA–Protein interactions for RNA: ENST00000483020.5

TSC2-213, Transcript of TSC complex subunit 2, humanhuman

TSL 4

Gene TSC2, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-213ENST00000483020 C8orf58Q8NAV2 365 aa17.09■□□□□ 0.33
TSC2-213ENST00000483020 GBA2Q9HCG7 927 aaPredicted RBP17.09■□□□□ 0.33
TSC2-213ENST00000483020 DBF4Q9UBU7 674 aaPredicted RBP17.09■□□□□ 0.33
TSC2-213ENST00000483020 ADM5C9JUS6 153 aa17.08■□□□□ 0.32
TSC2-213ENST00000483020 ELL2O00472 640 aaPredicted RBP17.08■□□□□ 0.32
TSC2-213ENST00000483020 KIF23Q02241 960 aaPredicted RBP17.08■□□□□ 0.32
TSC2-213ENST00000483020 COPS6Q7L5N1 327 aa17.08■□□□□ 0.32
TSC2-213ENST00000483020 DPF2Q92785 391 aa17.08■□□□□ 0.32
TSC2-213ENST00000483020 DBNDD1Q9H9R9 158 aa17.08■□□□□ 0.32
TSC2-213ENST00000483020 CHPF2Q9P2E5 772 aa17.08■□□□□ 0.32
TSC2-213ENST00000483020 TRMT112Q9UI30 125 aaKnown RBP17.08■□□□□ 0.32
TSC2-213ENST00000483020 SH3TC1Q8TE82 1336 aa17.07■□□□□ 0.32
TSC2-213ENST00000483020 HSP90AB3PQ58FF7 597 aa17.07■□□□□ 0.32
TSC2-213ENST00000483020 C2orf69Q8N8R5 385 aa17.07■□□□□ 0.32
TSC2-213ENST00000483020 XAGE3Q8WTP9 111 aa17.07■□□□□ 0.32
TSC2-213ENST00000483020 TSR2Q969E8 191 aaKnown RBP17.07■□□□□ 0.32
TSC2-213ENST00000483020 HYPKQ9NX55 129 aa17.07■□□□□ 0.32
TSC2-213ENST00000483020 TRPA1O75762 1119 aa17.06■□□□□ 0.32
TSC2-213ENST00000483020 ZNF157P51786 506 aaPredicted RBP17.06■□□□□ 0.32
TSC2-213ENST00000483020 AIMP1Q12904 312 aaKnown RBP17.06■□□□□ 0.32
TSC2-213ENST00000483020 WASHC4Q2M389 1173 aa17.06■□□□□ 0.32
TSC2-213ENST00000483020 TMC4Q7Z404 712 aa17.06■□□□□ 0.32
TSC2-213ENST00000483020 CCDC102AQ96A19 550 aa17.06■□□□□ 0.32
TSC2-213ENST00000483020 ZNF428Q96B54 188 aa17.06■□□□□ 0.32
TSC2-213ENST00000483020 RNF186Q9NXI6 227 aa17.06■□□□□ 0.32
TSC2-213ENST00000483020 RTL9Q8NET4 1388 aa17.05■□□□□ 0.32
TSC2-213ENST00000483020 SLC10A3P09131 477 aa17.05■□□□□ 0.32
TSC2-213ENST00000483020 TCIRG1Q13488 830 aa17.05■□□□□ 0.32
TSC2-213ENST00000483020 RBM26Q5T8P6 1007 aaKnown RBP17.05■□□□□ 0.32
TSC2-213ENST00000483020 TSPYL6Q8N831 410 aa17.05■□□□□ 0.32
TSC2-213ENST00000483020 DCPSQ96C86 337 aaKnown RBP17.05■□□□□ 0.32
TSC2-213ENST00000483020 PSME4Q14997 1843 aa17.05■□□□□ 0.32
TSC2-213ENST00000483020 RIMBP2O15034 1052 aa17.04■□□□□ 0.32
TSC2-213ENST00000483020 ECE2O60344 883 aa17.04■□□□□ 0.32
TSC2-213ENST00000483020 RPS12P25398 132 aaKnown RBP17.04■□□□□ 0.32
TSC2-213ENST00000483020 CCDC30Q5VVM6 783 aa17.04■□□□□ 0.32
TSC2-213ENST00000483020 CELF1Q92879 486 aaKnown RBP17.04■□□□□ 0.32
TSC2-213ENST00000483020 KCNQ5Q9NR82 932 aa17.04■□□□□ 0.32
TSC2-213ENST00000483020 GOLGA2Q08379 1002 aa17.03■□□□□ 0.32
TSC2-213ENST00000483020 KIF4BQ2VIQ3 1234 aa17.03■□□□□ 0.32
TSC2-213ENST00000483020 ANKRD13DQ6ZTN6 518 aa17.03■□□□□ 0.32
TSC2-213ENST00000483020 MIER1Q8N108 512 aa17.03■□□□□ 0.32
TSC2-213ENST00000483020 CSRNP1Q96S65 589 aa17.03■□□□□ 0.32
TSC2-213ENST00000483020 GGA3Q9NZ52 723 aa17.03■□□□□ 0.32
TSC2-213ENST00000483020 POLLQ9UGP5 575 aa17.03■□□□□ 0.32
TSC2-213ENST00000483020 NSFL1CQ9UNZ2 370 aaKnown RBP17.03■□□□□ 0.32
TSC2-213ENST00000483020 ASTN2O75129 1339 aaPredicted RBP17.02■□□□□ 0.32
TSC2-213ENST00000483020 ZNF521Q96K83 1311 aa17.02■□□□□ 0.32
TSC2-213ENST00000483020 FANCIQ9NVI1 1328 aa17.02■□□□□ 0.32
TSC2-213ENST00000483020 GPSM2P81274 684 aa17.02■□□□□ 0.32
TSC2-213ENST00000483020 TWISTNBQ3B726 338 aaPredicted RBP17.02■□□□□ 0.32
TSC2-213ENST00000483020 CTU1Q7Z7A3 348 aaKnown RBP17.02■□□□□ 0.32
TSC2-213ENST00000483020 PLBD2Q8NHP8 589 aa17.02■□□□□ 0.32
TSC2-213ENST00000483020 MYH16Q9H6N6 1097 aa17.02■□□□□ 0.32
TSC2-213ENST00000483020 SPINK5Q9NQ38 1064 aaPredicted RBP17.02■□□□□ 0.32
TSC2-213ENST00000483020 PAPPA2Q9BXP8 1791 aa17.02■□□□□ 0.31
TSC2-213ENST00000483020 C6orf229H3BNL8 230 aa17.01■□□□□ 0.31
TSC2-213ENST00000483020 DOK7Q18PE1 504 aa17.01■□□□□ 0.31
TSC2-213ENST00000483020 PRPF38BQ5VTL8 546 aaKnown RBP17.01■□□□□ 0.31
TSC2-213ENST00000483020 CDCA5Q96FF9 252 aa17.01■□□□□ 0.31
TSC2-213ENST00000483020 VAMP4O75379 141 aa17■□□□□ 0.31
TSC2-213ENST00000483020 RASAL3Q86YV0 1011 aa17■□□□□ 0.31
TSC2-213ENST00000483020 SULF1Q8IWU6 871 aa17■□□□□ 0.31
TSC2-213ENST00000483020 SF3B3Q15393 1217 aaKnown RBP16.99■□□□□ 0.31
TSC2-213ENST00000483020 FAM89AQ96GI7 184 aa16.99■□□□□ 0.31
TSC2-213ENST00000483020 EYA3Q99504 573 aa16.99■□□□□ 0.31
TSC2-213ENST00000483020 PHAXQ9H814 394 aaKnown RBP16.99■□□□□ 0.31
TSC2-213ENST00000483020 VIL1P09327 827 aaKnown RBP16.98■□□□□ 0.31
TSC2-213ENST00000483020 EXOSC9Q06265 439 aaKnown RBP16.98■□□□□ 0.31
TSC2-213ENST00000483020 TBC1D16Q8TBP0 767 aa16.98■□□□□ 0.31
TSC2-213ENST00000483020 STK31Q9BXU1 1019 aa16.98■□□□□ 0.31
TSC2-213ENST00000483020 HPS5Q9UPZ3 1129 aa16.98■□□□□ 0.31
TSC2-213ENST00000483020 TRIM28Q13263 835 aaKnown RBP16.97■□□□□ 0.31
TSC2-213ENST00000483020 ISCA1Q9BUE6 129 aa16.97■□□□□ 0.31
TSC2-213ENST00000483020 ZNF609O15014 1411 aa16.96■□□□□ 0.31
TSC2-213ENST00000483020 ATP5J2-PTCD1G3V325 749 aa16.96■□□□□ 0.31
TSC2-213ENST00000483020 DDX58O95786 925 aaKnown RBP16.96■□□□□ 0.31
TSC2-213ENST00000483020 SLC4A2P04920 1241 aa16.96■□□□□ 0.31
TSC2-213ENST00000483020 RTL5Q5HYW3 569 aaPredicted RBP16.96■□□□□ 0.31
TSC2-213ENST00000483020 ANGEL2Q5VTE6 544 aaKnown RBP16.96■□□□□ 0.31
TSC2-213ENST00000483020 RIC3Q7Z5B4 369 aa16.96■□□□□ 0.31
TSC2-213ENST00000483020 E9PSI1 815 aa16.95■□□□□ 0.3
TSC2-213ENST00000483020 ZNF280AP59817 542 aaPredicted RBP16.95■□□□□ 0.3
TSC2-213ENST00000483020 SCARF1Q14162 830 aa16.95■□□□□ 0.3
TSC2-213ENST00000483020 REM2Q8IYK8 340 aaPredicted RBP16.95■□□□□ 0.3
TSC2-213ENST00000483020 ZNF646O15015 1829 aaPredicted RBP16.95■□□□□ 0.3
TSC2-213ENST00000483020 UFL1O94874 794 aa16.94■□□□□ 0.3
TSC2-213ENST00000483020 ZC3H12CQ9C0D7 883 aaKnown RBP16.94■□□□□ 0.3
TSC2-213ENST00000483020 PODXL2Q9NZ53 605 aa16.94■□□□□ 0.3
TSC2-213ENST00000483020 IRS4O14654 1257 aaPredicted RBP16.93■□□□□ 0.3
TSC2-213ENST00000483020 RPS8P62241 208 aaKnown RBP16.93■□□□□ 0.3
TSC2-213ENST00000483020 FKBP1BP68106 108 aa16.93■□□□□ 0.3
TSC2-213ENST00000483020 SLFN5Q08AF3 891 aa16.93■□□□□ 0.3
TSC2-213ENST00000483020 KSR2Q6VAB6 950 aa16.93■□□□□ 0.3
TSC2-213ENST00000483020 MOB2Q70IA6 237 aa16.93■□□□□ 0.3
TSC2-213ENST00000483020 AGBL3Q8NEM8 1001 aa16.93■□□□□ 0.3
TSC2-213ENST00000483020 ZNF296Q8WUU4 475 aaPredicted RBP16.93■□□□□ 0.3
TSC2-213ENST00000483020 SCAF8Q9UPN6 1271 aaKnown RBP16.93■□□□□ 0.3
TSC2-213ENST00000483020 SPEF2Q9C093 1822 aa16.92■□□□□ 0.3
TSC2-213ENST00000483020 TBC1D8O95759 1140 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms