RNA–Protein interactions for RNA: ENST00000482651.5

HDGF-208, Transcript of heparin binding growth factor, human

TSL 3

Gene HDGF, Length 966 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDGF-208	ENST00000482651	SMC1B	Q8NDV3	1235 aa		11.21	□□□□□ -0.61
HDGF-208	ENST00000482651	GRAPL	Q8TC17	118 aa	Predicted RBP	11.21	□□□□□ -0.61
HDGF-208	ENST00000482651	ZNF428	Q96B54	188 aa		11.21	□□□□□ -0.61
HDGF-208	ENST00000482651	FAM89A	Q96GI7	184 aa		11.21	□□□□□ -0.61
HDGF-208	ENST00000482651	MYD88	Q99836	296 aa		11.21	□□□□□ -0.61
HDGF-208	ENST00000482651	STK31	Q9BXU1	1019 aa		11.21	□□□□□ -0.61
HDGF-208	ENST00000482651	TMX4	Q9H1E5	349 aa	Predicted RBP	11.21	□□□□□ -0.61
HDGF-208	ENST00000482651	SALL2	Q9Y467	1007 aa	Predicted RBP	11.21	□□□□□ -0.61
HDGF-208	ENST00000482651	ANKRD36C	Q5JPF3	1778 aa		11.21	□□□□□ -0.62
HDGF-208	ENST00000482651	FZD9	O00144	591 aa		11.2	□□□□□ -0.62
HDGF-208	ENST00000482651	APLP1	P51693	650 aa		11.2	□□□□□ -0.62
HDGF-208	ENST00000482651	SF3B3	Q15393	1217 aa	Known RBP	11.2	□□□□□ -0.62
HDGF-208	ENST00000482651	SLC51A	Q86UW1	340 aa		11.2	□□□□□ -0.62
HDGF-208	ENST00000482651	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	11.2	□□□□□ -0.62
HDGF-208	ENST00000482651	CCDC191	Q8NCU4	936 aa		11.2	□□□□□ -0.62
HDGF-208	ENST00000482651	L3MBTL3	Q96JM7	780 aa	Predicted RBP	11.2	□□□□□ -0.62
HDGF-208	ENST00000482651	METTL22	Q9BUU2	404 aa	Predicted RBP	11.2	□□□□□ -0.62
HDGF-208	ENST00000482651	ZNF541	Q9H0D2	1346 aa		11.19	□□□□□ -0.62
HDGF-208	ENST00000482651	WDR90	Q96KV7	1748 aa		11.19	□□□□□ -0.62
HDGF-208	ENST00000482651	IRS4	O14654	1257 aa	Predicted RBP	11.19	□□□□□ -0.62
HDGF-208	ENST00000482651	PCCA	P05165	728 aa	Predicted RBP	11.19	□□□□□ -0.62
HDGF-208	ENST00000482651	HSP90B1	P14625	803 aa	Known RBP	11.19	□□□□□ -0.62
HDGF-208	ENST00000482651	HNRNPU	Q00839	825 aa	Known RBP eCLIP	11.19	□□□□□ -0.62
HDGF-208	ENST00000482651	KSR2	Q6VAB6	950 aa		11.19	□□□□□ -0.62
HDGF-208	ENST00000482651	TMC4	Q7Z404	712 aa		11.19	□□□□□ -0.62
HDGF-208	ENST00000482651	PARP9	Q8IXQ6	854 aa		11.19	□□□□□ -0.62
HDGF-208	ENST00000482651	SP8	Q8IXZ3	490 aa		11.19	□□□□□ -0.62
HDGF-208	ENST00000482651	RGS22	Q8NE09	1264 aa		11.19	□□□□□ -0.62
HDGF-208	ENST00000482651	JDP2	Q8WYK2	163 aa		11.19	□□□□□ -0.62
HDGF-208	ENST00000482651	RTFDC1	Q9BY42	306 aa	Predicted RBP	11.19	□□□□□ -0.62
HDGF-208	ENST00000482651	VPS33B	Q9H267	617 aa		11.19	□□□□□ -0.62
HDGF-208	ENST00000482651	CWC25	Q9NXE8	425 aa	Predicted RBP	11.19	□□□□□ -0.62
HDGF-208	ENST00000482651	MAP3K2	Q9Y2U5	619 aa		11.19	□□□□□ -0.62
HDGF-208	ENST00000482651	PI4KAP2	A4QPH2	592 aa		11.18	□□□□□ -0.62
HDGF-208	ENST00000482651	IQCA1L	A6NCM1	817 aa		11.18	□□□□□ -0.62
HDGF-208	ENST00000482651	RTL5	Q5HYW3	569 aa	Predicted RBP	11.18	□□□□□ -0.62
HDGF-208	ENST00000482651	DPP8	Q6V1X1	898 aa	Predicted RBP	11.18	□□□□□ -0.62
HDGF-208	ENST00000482651	LARGE2	Q8N3Y3	721 aa		11.18	□□□□□ -0.62
HDGF-208	ENST00000482651	PI4KAP1	Q8N8J0	262 aa		11.18	□□□□□ -0.62
HDGF-208	ENST00000482651	SUPT20H	Q8NEM7	779 aa		11.18	□□□□□ -0.62
HDGF-208	ENST00000482651	CACNA1S	Q13698	1873 aa		11.18	□□□□□ -0.62
HDGF-208	ENST00000482651	PPIP5K2	O43314	1243 aa		11.17	□□□□□ -0.62
HDGF-208	ENST00000482651	VAMP4	O75379	141 aa		11.17	□□□□□ -0.62
HDGF-208	ENST00000482651	EIF6	P56537	245 aa	Known RBP	11.17	□□□□□ -0.62
HDGF-208	ENST00000482651	EXOSC9	Q06265	439 aa	Known RBP	11.17	□□□□□ -0.62
HDGF-208	ENST00000482651	NEXN	Q0ZGT2	675 aa		11.17	□□□□□ -0.62
HDGF-208	ENST00000482651	GPC2	Q8N158	579 aa		11.17	□□□□□ -0.62
HDGF-208	ENST00000482651	MPND	Q8N594	471 aa		11.17	□□□□□ -0.62
HDGF-208	ENST00000482651	ZNF579	Q8NAF0	562 aa	Known RBP	11.17	□□□□□ -0.62
HDGF-208	ENST00000482651	CCDC102A	Q96A19	550 aa		11.17	□□□□□ -0.62
HDGF-208	ENST00000482651	MYH16	Q9H6N6	1097 aa		11.17	□□□□□ -0.62
HDGF-208	ENST00000482651	DICER1	Q9UPY3	1922 aa	Known RBP	11.16	□□□□□ -0.62
HDGF-208	ENST00000482651	IGKV5-2	P06315	115 aa		11.16	□□□□□ -0.62
HDGF-208	ENST00000482651	AMHR2	Q16671	573 aa		11.16	□□□□□ -0.62
HDGF-208	ENST00000482651	AOC3	Q16853	763 aa		11.16	□□□□□ -0.62
HDGF-208	ENST00000482651	G2E3	Q7L622	706 aa		11.16	□□□□□ -0.62
HDGF-208	ENST00000482651	NIM1K	Q8IY84	436 aa		11.16	□□□□□ -0.62
HDGF-208	ENST00000482651	CELF1	Q92879	486 aa	Known RBP	11.16	□□□□□ -0.62
HDGF-208	ENST00000482651	TAF1D	Q9H5J8	278 aa	Predicted RBP	11.16	□□□□□ -0.62
HDGF-208	ENST00000482651	COL4A5	P29400	1685 aa		11.16	□□□□□ -0.62
HDGF-208	ENST00000482651	CEP350	Q5VT06	3117 aa		11.15	□□□□□ -0.62
HDGF-208	ENST00000482651	ZNF521	Q96K83	1311 aa		11.15	□□□□□ -0.62
HDGF-208	ENST00000482651	CDHR2	Q9BYE9	1310 aa		11.15	□□□□□ -0.62
HDGF-208	ENST00000482651	PDE8A	O60658	829 aa		11.15	□□□□□ -0.62
HDGF-208	ENST00000482651	KIAA2012	Q0VF49	1180 aa		11.15	□□□□□ -0.62
HDGF-208	ENST00000482651	CCDC152	Q4G0S7	254 aa		11.15	□□□□□ -0.62
HDGF-208	ENST00000482651	CHADL	Q6NUI6	762 aa		11.15	□□□□□ -0.62
HDGF-208	ENST00000482651	GOPC	Q9HD26	462 aa		11.15	□□□□□ -0.62
HDGF-208	ENST00000482651	HACL1	Q9UJ83	578 aa		11.15	□□□□□ -0.62
HDGF-208	ENST00000482651	NEURL1B	A8MQ27	555 aa		11.14	□□□□□ -0.63
HDGF-208	ENST00000482651	POTEI	P0CG38	1075 aa		11.14	□□□□□ -0.63
HDGF-208	ENST00000482651	POTEJ	P0CG39	1038 aa		11.14	□□□□□ -0.63
HDGF-208	ENST00000482651	RPS8	P62241	208 aa	Known RBP	11.14	□□□□□ -0.63
HDGF-208	ENST00000482651	FKBP5	Q13451	457 aa	Predicted RBP	11.14	□□□□□ -0.63
HDGF-208	ENST00000482651	MCM6	Q14566	821 aa		11.14	□□□□□ -0.63
HDGF-208	ENST00000482651	CWF19L2	Q2TBE0	894 aa	Known RBP	11.14	□□□□□ -0.63
HDGF-208	ENST00000482651	LDHD	Q86WU2	507 aa		11.14	□□□□□ -0.63
HDGF-208	ENST00000482651	JARID2	Q92833	1246 aa	Predicted RBP	11.14	□□□□□ -0.63
HDGF-208	ENST00000482651	MS4A4A	Q96JQ5	239 aa		11.14	□□□□□ -0.63
HDGF-208	ENST00000482651	MTMR7	Q9Y216	660 aa		11.14	□□□□□ -0.63
HDGF-208	ENST00000482651	GJA3	Q9Y6H8	435 aa		11.14	□□□□□ -0.63
HDGF-208	ENST00000482651	DDX60	Q8IY21	1712 aa	Known RBP	11.14	□□□□□ -0.63
HDGF-208	ENST00000482651	LAMB2	P55268	1798 aa		11.13	□□□□□ -0.63
HDGF-208	ENST00000482651	CCDC88A	Q3V6T2	1871 aa		11.13	□□□□□ -0.63
HDGF-208	ENST00000482651		E9PSI1	815 aa		11.13	□□□□□ -0.63
HDGF-208	ENST00000482651	EPHX2	P34913	555 aa		11.13	□□□□□ -0.63
HDGF-208	ENST00000482651	CTSW	P56202	376 aa		11.13	□□□□□ -0.63
HDGF-208	ENST00000482651	DNAJC5G	Q8N7S2	189 aa		11.13	□□□□□ -0.63
HDGF-208	ENST00000482651	DNAAF4	Q8WXU2	420 aa		11.13	□□□□□ -0.63
HDGF-208	ENST00000482651	SEC31B	Q9NQW1	1179 aa		11.13	□□□□□ -0.63
HDGF-208	ENST00000482651	ZNRF3	Q9ULT6	936 aa		11.13	□□□□□ -0.63
HDGF-208	ENST00000482651	ZBED9	Q6R2W3	1325 aa		11.12	□□□□□ -0.63
HDGF-208	ENST00000482651		H7C1W4	665 aa		11.12	□□□□□ -0.63
HDGF-208	ENST00000482651	IGSF3	O75054	1194 aa		11.12	□□□□□ -0.63
HDGF-208	ENST00000482651	LMOD1	P29536	600 aa	Predicted RBP	11.12	□□□□□ -0.63
HDGF-208	ENST00000482651	GPSM2	P81274	684 aa		11.12	□□□□□ -0.63
HDGF-208	ENST00000482651	HTRA3	P83110	453 aa		11.12	□□□□□ -0.63
HDGF-208	ENST00000482651	GCKR	Q14397	625 aa		11.12	□□□□□ -0.63
HDGF-208	ENST00000482651	EAPP	Q56P03	285 aa	Predicted RBP	11.12	□□□□□ -0.63
HDGF-208	ENST00000482651	PNMA8A	Q86V59	439 aa	Predicted RBP	11.12	□□□□□ -0.63

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