RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 FGD1P98174 961 aa9.69□□□□□ -0.86
SF3B1-210ENST00000482158 IGF1RP08069 1367 aa9.68□□□□□ -0.86
SF3B1-210ENST00000482158 ACPPP15309 386 aa9.68□□□□□ -0.86
SF3B1-210ENST00000482158 VAMP1P23763 118 aa9.68□□□□□ -0.86
SF3B1-210ENST00000482158 GNA15P30679 374 aa9.68□□□□□ -0.86
SF3B1-210ENST00000482158 GPLD1P80108 840 aa9.68□□□□□ -0.86
SF3B1-210ENST00000482158 NEUROD1Q13562 356 aa9.68□□□□□ -0.86
SF3B1-210ENST00000482158 FCHSD1Q86WN1 690 aa9.68□□□□□ -0.86
SF3B1-210ENST00000482158 SLC16A10Q8TF71 515 aa9.68□□□□□ -0.86
SF3B1-210ENST00000482158 TNFRSF25Q93038 417 aa9.68□□□□□ -0.86
SF3B1-210ENST00000482158 NSUN5Q96P11 429 aaKnown RBP9.68□□□□□ -0.86
SF3B1-210ENST00000482158 DNAJB12Q9NXW2 375 aaKnown RBP9.68□□□□□ -0.86
SF3B1-210ENST00000482158 PHF20L1A8MW92 1017 aa9.67□□□□□ -0.86
SF3B1-210ENST00000482158 E9PSI1 815 aa9.67□□□□□ -0.86
SF3B1-210ENST00000482158 MAP2K3P46734 347 aa9.67□□□□□ -0.86
SF3B1-210ENST00000482158 MLLT1Q03111 559 aaPredicted RBP9.67□□□□□ -0.86
SF3B1-210ENST00000482158 HYAL2Q12891 473 aa9.67□□□□□ -0.86
SF3B1-210ENST00000482158 LDLRAD1Q5T700 205 aa9.67□□□□□ -0.86
SF3B1-210ENST00000482158 CEP120Q8N960 986 aa9.67□□□□□ -0.86
SF3B1-210ENST00000482158 IRF7Q92985 503 aa9.67□□□□□ -0.86
SF3B1-210ENST00000482158 CNTNAP3BQ96NU0 1288 aa9.67□□□□□ -0.86
SF3B1-210ENST00000482158 CNTNAP3Q9BZ76 1288 aa9.67□□□□□ -0.86
SF3B1-210ENST00000482158 OSBPL7Q9BZF2 842 aa9.67□□□□□ -0.86
SF3B1-210ENST00000482158 A0A1W2PP55 124 aa9.66□□□□□ -0.86
SF3B1-210ENST00000482158 J3QW42 95 aa9.66□□□□□ -0.86
SF3B1-210ENST00000482158 XPCQ01831 940 aaPredicted RBP9.66□□□□□ -0.86
SF3B1-210ENST00000482158 KIAA0319Q5VV43 1072 aa9.66□□□□□ -0.86
SF3B1-210ENST00000482158 HFE2Q6ZVN8 426 aa9.66□□□□□ -0.86
SF3B1-210ENST00000482158 UBE2OQ9C0C9 1292 aaKnown RBP9.66□□□□□ -0.86
SF3B1-210ENST00000482158 IGFLR1Q9H665 355 aa9.66□□□□□ -0.86
SF3B1-210ENST00000482158 LOC102724428A0A0B4J2F2 783 aa9.65□□□□□ -0.86
SF3B1-210ENST00000482158 NEURL1BA8MQ27 555 aa9.65□□□□□ -0.86
SF3B1-210ENST00000482158 ADARB2-AS1A8MUL3 147 aa9.65□□□□□ -0.86
SF3B1-210ENST00000482158 EDN3P14138 238 aa9.65□□□□□ -0.86
SF3B1-210ENST00000482158 ADH6P28332 368 aa9.65□□□□□ -0.86
SF3B1-210ENST00000482158 SIK1P57059 783 aa9.65□□□□□ -0.86
SF3B1-210ENST00000482158 PSMD2Q13200 908 aa9.65□□□□□ -0.86
SF3B1-210ENST00000482158 GGA1Q9UJY5 639 aa9.65□□□□□ -0.86
SF3B1-210ENST00000482158 AK5Q9Y6K8 562 aa9.65□□□□□ -0.86
SF3B1-210ENST00000482158 NFKBIEO00221 500 aa9.64□□□□□ -0.87
SF3B1-210ENST00000482158 TRPA1O75762 1119 aa9.64□□□□□ -0.87
SF3B1-210ENST00000482158 RECKO95980 971 aa9.64□□□□□ -0.87
SF3B1-210ENST00000482158 SRSF11Q05519 484 aaKnown RBP9.64□□□□□ -0.87
SF3B1-210ENST00000482158 GRM2Q14416 872 aa9.64□□□□□ -0.87
SF3B1-210ENST00000482158 C1orf229Q6ZS94 237 aaPredicted RBP9.64□□□□□ -0.87
SF3B1-210ENST00000482158 NCAPG2Q86XI2 1143 aa9.64□□□□□ -0.87
SF3B1-210ENST00000482158 GLIS3Q8NEA6 775 aa9.64□□□□□ -0.87
SF3B1-210ENST00000482158 FRMD6Q96NE9 622 aa9.64□□□□□ -0.87
SF3B1-210ENST00000482158 ZKSCAN3Q9BRR0 538 aa9.64□□□□□ -0.87
SF3B1-210ENST00000482158 NLRP2Q9NX02 1062 aa9.64□□□□□ -0.87
SF3B1-210ENST00000482158 NAGPAQ9UK23 515 aa9.64□□□□□ -0.87
SF3B1-210ENST00000482158 SLC6A14Q9UN76 642 aa9.64□□□□□ -0.87
SF3B1-210ENST00000482158 NSFL1CQ9UNZ2 370 aaKnown RBP9.64□□□□□ -0.87
SF3B1-210ENST00000482158 TBC1D8BQ0IIM8 1120 aa9.63□□□□□ -0.87
SF3B1-210ENST00000482158 ACDQ96AP0 544 aa9.63□□□□□ -0.87
SF3B1-210ENST00000482158 HHIPQ96QV1 700 aa9.63□□□□□ -0.87
SF3B1-210ENST00000482158 BCO2Q9BYV7 579 aa9.63□□□□□ -0.87
SF3B1-210ENST00000482158 SUV39H2Q9H5I1 410 aa9.63□□□□□ -0.87
SF3B1-210ENST00000482158 IGSF5Q9NSI5 407 aa9.63□□□□□ -0.87
SF3B1-210ENST00000482158 DZANK1Q9NVP4 752 aa9.63□□□□□ -0.87
SF3B1-210ENST00000482158 SPG7Q9UQ90 795 aa9.63□□□□□ -0.87
SF3B1-210ENST00000482158 SORBS3O60504 671 aa9.62□□□□□ -0.87
SF3B1-210ENST00000482158 CTSHP09668 335 aa9.62□□□□□ -0.87
SF3B1-210ENST00000482158 ADH7P40394 386 aa9.62□□□□□ -0.87
SF3B1-210ENST00000482158 NXPE4Q6UWF7 544 aa9.62□□□□□ -0.87
SF3B1-210ENST00000482158 ZNF775Q96BV0 537 aaPredicted RBP9.62□□□□□ -0.87
SF3B1-210ENST00000482158 TCF12Q99081 682 aa9.62□□□□□ -0.87
SF3B1-210ENST00000482158 OXCT2Q9BYC2 517 aaPredicted RBP9.62□□□□□ -0.87
SF3B1-210ENST00000482158 C12orf49Q9H741 205 aa9.62□□□□□ -0.87
SF3B1-210ENST00000482158 GADD45BO75293 160 aaPredicted RBP9.61□□□□□ -0.87
SF3B1-210ENST00000482158 ADAMTS2O95450 1211 aa9.61□□□□□ -0.87
SF3B1-210ENST00000482158 GMPRP36959 345 aa9.61□□□□□ -0.87
SF3B1-210ENST00000482158 ATP11AP98196 1134 aa9.61□□□□□ -0.87
SF3B1-210ENST00000482158 OSMRQ99650 979 aa9.61□□□□□ -0.87
SF3B1-210ENST00000482158 BACH2Q9BYV9 841 aa9.61□□□□□ -0.87
SF3B1-210ENST00000482158 RASSF4Q9H2L5 321 aa9.61□□□□□ -0.87
SF3B1-210ENST00000482158 GIPC1O14908 333 aa9.6□□□□□ -0.87
SF3B1-210ENST00000482158 SLURP2P0DP57 97 aa9.6□□□□□ -0.87
SF3B1-210ENST00000482158 PCSK7Q16549 785 aa9.6□□□□□ -0.87
SF3B1-210ENST00000482158 PERM1Q5SV97 790 aa9.6□□□□□ -0.87
SF3B1-210ENST00000482158 LCE2AQ5TA79 106 aaPredicted RBP9.6□□□□□ -0.87
SF3B1-210ENST00000482158 ADAMTSL4Q6UY14 1074 aa9.6□□□□□ -0.87
SF3B1-210ENST00000482158 SLCO4C1Q6ZQN7 724 aa9.6□□□□□ -0.87
SF3B1-210ENST00000482158 FAM35AQ86V20 835 aa9.6□□□□□ -0.87
SF3B1-210ENST00000482158 GOLGA6L1Q8N7Z2 621 aa9.6□□□□□ -0.87
SF3B1-210ENST00000482158 EHD4Q9H223 541 aa9.6□□□□□ -0.87
SF3B1-210ENST00000482158 STARD13Q9Y3M8 1113 aa9.6□□□□□ -0.87
SF3B1-210ENST00000482158 ELOA3CA0A087WX78 387 aaPredicted RBP9.59□□□□□ -0.87
SF3B1-210ENST00000482158 ELOA3DA6NLF2 546 aaPredicted RBP9.59□□□□□ -0.87
SF3B1-210ENST00000482158 EPXP11678 715 aa9.59□□□□□ -0.87
SF3B1-210ENST00000482158 CPB1P15086 417 aa9.59□□□□□ -0.87
SF3B1-210ENST00000482158 EIF4BP23588 611 aaKnown RBP9.59□□□□□ -0.87
SF3B1-210ENST00000482158 ELOA3BQ3SY89 546 aa9.59□□□□□ -0.87
SF3B1-210ENST00000482158 CCNJLQ8IV13 435 aa9.59□□□□□ -0.87
SF3B1-210ENST00000482158 ELOA3Q8NG57 546 aa9.59□□□□□ -0.87
SF3B1-210ENST00000482158 LPIN3Q9BQK8 851 aa9.59□□□□□ -0.87
SF3B1-210ENST00000482158 PBX4Q9BYU1 374 aa9.59□□□□□ -0.87
SF3B1-210ENST00000482158 LIN7BQ9HAP6 207 aa9.59□□□□□ -0.87
SF3B1-210ENST00000482158 MRS2Q9HD23 443 aa9.59□□□□□ -0.87
SF3B1-210ENST00000482158 VTI1BQ9UEU0 232 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms