RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 PI4KAP2A4QPH2 592 aa15.04■□□□□ -0
VARS2-208ENST00000477052 UFL1O94874 794 aa15.04■□□□□ -0
VARS2-208ENST00000477052 PCCAP05165 728 aaPredicted RBP15.04■□□□□ -0
VARS2-208ENST00000477052 IGKV5-2P06315 115 aa15.04■□□□□ -0
VARS2-208ENST00000477052 PI4KAP1Q8N8J0 262 aa15.04■□□□□ -0
VARS2-208ENST00000477052 CCDC191Q8NCU4 936 aa15.04■□□□□ -0
VARS2-208ENST00000477052 ANKIB1Q9P2G1 1089 aa15.04■□□□□ -0
VARS2-208ENST00000477052 TSKSQ9UJT2 592 aa15.04■□□□□ -0
VARS2-208ENST00000477052 TLL2Q9Y6L7 1015 aa15.04■□□□□ -0
VARS2-208ENST00000477052 H7C1D1 291 aa15.03■□□□□ -0
VARS2-208ENST00000477052 PDE8AO60658 829 aa15.03■□□□□ -0
VARS2-208ENST00000477052 HSPA8P11142 646 aaKnown RBP15.03■□□□□ -0
VARS2-208ENST00000477052 CWF19L2Q2TBE0 894 aaKnown RBP15.03■□□□□ -0
VARS2-208ENST00000477052 WWC1Q8IX03 1113 aa15.03■□□□□ -0
VARS2-208ENST00000477052 PGAP2Q9UHJ9 254 aa15.03■□□□□ -0
VARS2-208ENST00000477052 ASTN2O75129 1339 aaPredicted RBP15.02■□□□□ -0
VARS2-208ENST00000477052 DDX58O95786 925 aaKnown RBP15.02■□□□□ -0
VARS2-208ENST00000477052 ZEB1P37275 1124 aaPredicted RBP15.02■□□□□ -0
VARS2-208ENST00000477052 CCDC152Q4G0S7 254 aa15.02■□□□□ -0
VARS2-208ENST00000477052 SAPCD2Q86UD0 394 aa15.02■□□□□ -0
VARS2-208ENST00000477052 ZC3H12CQ9C0D7 883 aaKnown RBP15.02■□□□□ -0
VARS2-208ENST00000477052 PRDM10Q9NQV6 1147 aa15.02■□□□□ -0
VARS2-208ENST00000477052 SCN9AQ15858 1988 aa15.02□□□□□ -0.01
VARS2-208ENST00000477052 CDHR2Q9BYE9 1310 aa15.01□□□□□ -0.01
VARS2-208ENST00000477052 ADM5C9JUS6 153 aa15.01□□□□□ -0.01
VARS2-208ENST00000477052 MAP2K1Q02750 393 aaPredicted RBP15.01□□□□□ -0.01
VARS2-208ENST00000477052 KSR2Q6VAB6 950 aa15.01□□□□□ -0.01
VARS2-208ENST00000477052 EYA3Q99504 573 aa15.01□□□□□ -0.01
VARS2-208ENST00000477052 GGA1Q9UJY5 639 aa15.01□□□□□ -0.01
VARS2-208ENST00000477052 G3V3G9 751 aa15□□□□□ -0.01
VARS2-208ENST00000477052 SLC4A2P04920 1241 aa15□□□□□ -0.01
VARS2-208ENST00000477052 ECE1P42892 770 aa15□□□□□ -0.01
VARS2-208ENST00000477052 TWISTNBQ3B726 338 aaPredicted RBP15□□□□□ -0.01
VARS2-208ENST00000477052 DCAF8Q5TAQ9 597 aa15□□□□□ -0.01
VARS2-208ENST00000477052 CDC37L1Q7L3B6 337 aa15□□□□□ -0.01
VARS2-208ENST00000477052 ANKRD18AQ8IVF6 992 aa15□□□□□ -0.01
VARS2-208ENST00000477052 ZIC5Q96T25 663 aa15□□□□□ -0.01
VARS2-208ENST00000477052 STK31Q9BXU1 1019 aa15□□□□□ -0.01
VARS2-208ENST00000477052 GREM2Q9H772 168 aa15□□□□□ -0.01
VARS2-208ENST00000477052 MRS2Q9HD23 443 aa15□□□□□ -0.01
VARS2-208ENST00000477052 PODXL2Q9NZ53 605 aa15□□□□□ -0.01
VARS2-208ENST00000477052 CTSWP56202 376 aa14.99□□□□□ -0.01
VARS2-208ENST00000477052 KRT26Q7Z3Y9 468 aa14.99□□□□□ -0.01
VARS2-208ENST00000477052 ZC3H15Q8WU90 426 aaKnown RBP14.99□□□□□ -0.01
VARS2-208ENST00000477052 DPF2Q92785 391 aa14.99□□□□□ -0.01
VARS2-208ENST00000477052 SCAF8Q9UPN6 1271 aaKnown RBP14.99□□□□□ -0.01
VARS2-208ENST00000477052 SPEF2Q9C093 1822 aa14.99□□□□□ -0.01
VARS2-208ENST00000477052 POLR2AP24928 1970 aaKnown RBP14.98□□□□□ -0.01
VARS2-208ENST00000477052 NEURL1BA8MQ27 555 aa14.98□□□□□ -0.01
VARS2-208ENST00000477052 VIL1P09327 827 aaKnown RBP14.98□□□□□ -0.01
VARS2-208ENST00000477052 UBE3BQ7Z3V4 1068 aa14.98□□□□□ -0.01
VARS2-208ENST00000477052 TTLL11Q8NHH1 800 aa14.98□□□□□ -0.01
VARS2-208ENST00000477052 MXD3Q9BW11 206 aa14.98□□□□□ -0.01
VARS2-208ENST00000477052 THSD7BQ9C0I4 1608 aa14.97□□□□□ -0.01
VARS2-208ENST00000477052 HSP90B1P14625 803 aaKnown RBP14.97□□□□□ -0.01
VARS2-208ENST00000477052 CCDC27Q2M243 656 aa14.97□□□□□ -0.01
VARS2-208ENST00000477052 KIF4BQ2VIQ3 1234 aa14.97□□□□□ -0.01
VARS2-208ENST00000477052 XDHP47989 1333 aa14.96□□□□□ -0.01
VARS2-208ENST00000477052 FANCIQ9NVI1 1328 aa14.96□□□□□ -0.01
VARS2-208ENST00000477052 RPS12P25398 132 aaKnown RBP14.96□□□□□ -0.01
VARS2-208ENST00000477052 HUNKP57058 714 aa14.96□□□□□ -0.01
VARS2-208ENST00000477052 NEXNQ0ZGT2 675 aa14.96□□□□□ -0.01
VARS2-208ENST00000477052 DCPSQ96C86 337 aaKnown RBP14.96□□□□□ -0.01
VARS2-208ENST00000477052 BEGAINQ9BUH8 593 aa14.96□□□□□ -0.01
VARS2-208ENST00000477052 GGA3Q9NZ52 723 aa14.96□□□□□ -0.01
VARS2-208ENST00000477052 MINPP1Q9UNW1 487 aa14.96□□□□□ -0.01
VARS2-208ENST00000477052 H7C1W4 665 aa14.95□□□□□ -0.02
VARS2-208ENST00000477052 FLIIQ13045 1269 aa14.95□□□□□ -0.02
VARS2-208ENST00000477052 RSBN1LQ6PCB5 846 aaPredicted RBP14.95□□□□□ -0.02
VARS2-208ENST00000477052 TXNRD3Q86VQ6 643 aa14.95□□□□□ -0.02
VARS2-208ENST00000477052 FBXW7Q969H0 707 aa14.95□□□□□ -0.02
VARS2-208ENST00000477052 CDC5LQ99459 802 aaKnown RBP14.95□□□□□ -0.02
VARS2-208ENST00000477052 SPINK5Q9NQ38 1064 aaPredicted RBP14.95□□□□□ -0.02
VARS2-208ENST00000477052 ATP2B4P23634 1241 aa14.94□□□□□ -0.02
VARS2-208ENST00000477052 KLRK1P26718 216 aa14.94□□□□□ -0.02
VARS2-208ENST00000477052 MAP2K2P36507 400 aa14.94□□□□□ -0.02
VARS2-208ENST00000477052 EXOSC9Q06265 439 aaKnown RBP14.94□□□□□ -0.02
VARS2-208ENST00000477052 FKBP5Q13451 457 aaPredicted RBP14.94□□□□□ -0.02
VARS2-208ENST00000477052 SCARF1Q14162 830 aa14.94□□□□□ -0.02
VARS2-208ENST00000477052 F6X3S4 739 aa14.93□□□□□ -0.02
VARS2-208ENST00000477052 ANP32CO43423 234 aa14.93□□□□□ -0.02
VARS2-208ENST00000477052 VAMP4O75379 141 aa14.93□□□□□ -0.02
VARS2-208ENST00000477052 GCKRQ14397 625 aa14.93□□□□□ -0.02
VARS2-208ENST00000477052 FAM161AQ3B820 660 aa14.93□□□□□ -0.02
VARS2-208ENST00000477052 ANGEL2Q5VTE6 544 aaKnown RBP14.93□□□□□ -0.02
VARS2-208ENST00000477052 GMLQ99445 158 aa14.93□□□□□ -0.02
VARS2-208ENST00000477052 CHMP4AQ9BY43 222 aa14.93□□□□□ -0.02
VARS2-208ENST00000477052 GBA2Q9HCG7 927 aaPredicted RBP14.93□□□□□ -0.02
VARS2-208ENST00000477052 BSDC1Q9NW68 430 aaPredicted RBP14.93□□□□□ -0.02
VARS2-208ENST00000477052 IL16Q14005 1332 aa14.92□□□□□ -0.02
VARS2-208ENST00000477052 MYH3P11055 1940 aa14.92□□□□□ -0.02
VARS2-208ENST00000477052 USP17L3A6NCW0 530 aa14.92□□□□□ -0.02
VARS2-208ENST00000477052 USP17L4A6NCW7 530 aa14.92□□□□□ -0.02
VARS2-208ENST00000477052 ZNF316A6NFI3 1004 aaPredicted RBP14.92□□□□□ -0.02
VARS2-208ENST00000477052 SNAP23O00161 211 aa14.92□□□□□ -0.02
VARS2-208ENST00000477052 ITGA6P23229 1130 aa14.92□□□□□ -0.02
VARS2-208ENST00000477052 CCT4P50991 539 aaKnown RBP14.92□□□□□ -0.02
VARS2-208ENST00000477052 CASP7P55210 303 aa14.92□□□□□ -0.02
VARS2-208ENST00000477052 ZNF280AP59817 542 aaPredicted RBP14.92□□□□□ -0.02
VARS2-208ENST00000477052 PRAMEF18Q5VWM3 479 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms